EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSSMAG00000010176 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Scophthalmus_maximus
Status: putative
Strand: Minus strand
Length: 21768 bases
Position: chr5:22341686-22363453
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSMAP00000016583	FDF	PF09532.10	4.6e-07	1	1
ENSSMAP00000016605	FDF	PF09532.10	4.6e-07	1	1
ENSSMAP00000016583	LSM14	PF12701.7	1.6e-08	1	1
ENSSMAP00000016605	LSM14	PF12701.7	1.6e-08	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSMAT00000016790	-	2806	-	ENSSMAP00000016583	473 (aa)	-	A0A2U9BDE6
ENSSMAT00000016813	-	2401	-	ENSSMAP00000016605	475 (aa)	-	-

Gene Model

Click here to download ENSSMAG00000010176's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSMAG00000010176's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSSMAG00000010176	-	99	65.145	ENSSMAG00000010695	edc3	99	65.145

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSMAG00000010176	-	99	56.538	ENSG00000179151	EDC3	100	72.222	Homo_sapiens
ENSSMAG00000010176	-	99	74.593	ENSAPOG00000008655	EDC3	99	74.593	Acanthochromis_polyacanthus
ENSSMAG00000010176	-	99	65.839	ENSAPOG00000010791	edc3	99	65.839	Acanthochromis_polyacanthus
ENSSMAG00000010176	-	99	56.725	ENSAMEG00000008963	EDC3	99	56.725	Ailuropoda_melanoleuca
ENSSMAG00000010176	-	99	64.730	ENSACIG00000017751	edc3	99	64.730	Amphilophus_citrinellus
ENSSMAG00000010176	-	99	74.343	ENSACIG00000005330	EDC3	99	74.343	Amphilophus_citrinellus
ENSSMAG00000010176	-	99	65.768	ENSAOCG00000005431	edc3	99	65.768	Amphiprion_ocellaris
ENSSMAG00000010176	-	99	81.013	ENSAOCG00000009103	-	99	81.013	Amphiprion_ocellaris
ENSSMAG00000010176	-	99	81.224	ENSAPEG00000007841	EDC3	99	81.224	Amphiprion_percula
ENSSMAG00000010176	-	99	65.768	ENSAPEG00000000968	edc3	99	65.768	Amphiprion_percula
ENSSMAG00000010176	-	99	66.253	ENSATEG00000015505	edc3	99	66.253	Anabas_testudineus
ENSSMAG00000010176	-	99	81.741	ENSATEG00000004205	-	99	81.741	Anabas_testudineus
ENSSMAG00000010176	-	74	67.521	ENSAPLG00000008957	EDC3	76	67.521	Anas_platyrhynchos
ENSSMAG00000010176	-	77	52.239	ENSACAG00000000460	-	100	52.239	Anolis_carolinensis
ENSSMAG00000010176	-	99	57.115	ENSANAG00000024078	EDC3	99	57.115	Aotus_nancymaae
ENSSMAG00000010176	-	99	65.073	ENSACLG00000007232	edc3	99	65.073	Astatotilapia_calliptera
ENSSMAG00000010176	-	99	75.372	ENSACLG00000018776	-	99	75.372	Astatotilapia_calliptera
ENSSMAG00000010176	-	99	63.780	ENSAMXG00000001589	edc3	99	63.780	Astyanax_mexicanus
ENSSMAG00000010176	-	99	57.640	ENSBTAG00000007308	EDC3	99	57.640	Bos_taurus
ENSSMAG00000010176	-	99	56.923	ENSCJAG00000017681	EDC3	99	56.923	Callithrix_jacchus
ENSSMAG00000010176	-	99	57.505	ENSCAFG00000017935	EDC3	99	57.505	Canis_familiaris
ENSSMAG00000010176	-	99	57.505	ENSCAFG00020003909	EDC3	99	57.505	Canis_lupus_dingo
ENSSMAG00000010176	-	99	57.834	ENSCHIG00000023658	EDC3	99	57.834	Capra_hircus
ENSSMAG00000010176	-	99	56.725	ENSTSYG00000004822	EDC3	99	56.725	Carlito_syrichta
ENSSMAG00000010176	-	99	57.700	ENSCPOG00000015595	EDC3	99	57.505	Cavia_porcellus
ENSSMAG00000010176	-	99	56.731	ENSCCAG00000021663	EDC3	99	56.731	Cebus_capucinus
ENSSMAG00000010176	-	99	57.895	ENSCATG00000037511	EDC3	99	57.895	Cercocebus_atys
ENSSMAG00000010176	-	99	57.700	ENSCLAG00000005700	EDC3	99	57.700	Chinchilla_lanigera
ENSSMAG00000010176	-	99	57.895	ENSCSAG00000014239	EDC3	99	57.895	Chlorocebus_sabaeus
ENSSMAG00000010176	-	99	56.920	ENSCPBG00000024239	EDC3	99	56.920	Chrysemys_picta_bellii
ENSSMAG00000010176	-	99	36.346	ENSCING00000022142	-	99	36.346	Ciona_intestinalis
ENSSMAG00000010176	-	99	57.895	ENSCANG00000028699	EDC3	99	57.895	Colobus_angolensis_palliatus
ENSSMAG00000010176	-	99	57.115	ENSCGRG00001013874	Edc3	99	57.115	Cricetulus_griseus_chok1gshd
ENSSMAG00000010176	-	99	57.115	ENSCGRG00000011885	Edc3	99	57.115	Cricetulus_griseus_crigri
ENSSMAG00000010176	-	99	65.904	ENSCSEG00000012996	edc3	99	65.904	Cynoglossus_semilaevis
ENSSMAG00000010176	-	99	65.625	ENSCVAG00000008023	edc3	99	65.625	Cyprinodon_variegatus
ENSSMAG00000010176	-	100	61.961	ENSDARG00000051931	edc3	100	61.886	Danio_rerio
ENSSMAG00000010176	-	99	51.923	ENSDNOG00000030661	EDC3	99	51.923	Dasypus_novemcinctus
ENSSMAG00000010176	-	70	72.222	ENSETEG00000002398	-	64	72.222	Echinops_telfairi
ENSSMAG00000010176	-	99	57.505	ENSEASG00005005071	EDC3	99	57.505	Equus_asinus_asinus
ENSSMAG00000010176	-	99	57.505	ENSECAG00000017994	EDC3	99	57.505	Equus_caballus
ENSSMAG00000010176	-	99	65.000	ENSELUG00000005794	edc3	99	65.000	Esox_lucius
ENSSMAG00000010176	-	99	69.328	ENSELUG00000007607	EDC3	99	69.328	Esox_lucius
ENSSMAG00000010176	-	99	57.310	ENSFCAG00000002014	EDC3	99	56.538	Felis_catus
ENSSMAG00000010176	-	98	54.960	ENSFALG00000004543	EDC3	96	54.960	Ficedula_albicollis
ENSSMAG00000010176	-	99	57.310	ENSFDAG00000012582	EDC3	99	57.310	Fukomys_damarensis
ENSSMAG00000010176	-	99	65.975	ENSFHEG00000009375	edc3	99	65.975	Fundulus_heteroclitus
ENSSMAG00000010176	-	99	67.152	ENSGMOG00000002715	edc3	99	67.152	Gadus_morhua
ENSSMAG00000010176	-	99	56.947	ENSGALG00000040181	EDC3	99	56.947	Gallus_gallus
ENSSMAG00000010176	-	99	65.631	ENSGAFG00000014433	edc3	99	65.496	Gambusia_affinis
ENSSMAG00000010176	-	99	70.530	ENSGACG00000014671	EDC3	99	70.923	Gasterosteus_aculeatus
ENSSMAG00000010176	-	99	65.145	ENSGACG00000009783	edc3	99	65.145	Gasterosteus_aculeatus
ENSSMAG00000010176	-	99	57.143	ENSGAGG00000023477	EDC3	99	57.143	Gopherus_agassizii
ENSSMAG00000010176	-	99	56.538	ENSGGOG00000003552	EDC3	99	56.538	Gorilla_gorilla
ENSSMAG00000010176	-	99	75.584	ENSHBUG00000020817	EDC3	99	75.584	Haplochromis_burtoni
ENSSMAG00000010176	-	99	65.073	ENSHBUG00000003635	edc3	99	65.073	Haplochromis_burtoni
ENSSMAG00000010176	-	99	63.711	ENSHCOG00000016834	edc3	99	64.124	Hippocampus_comes
ENSSMAG00000010176	-	99	65.010	ENSIPUG00000005695	edc3	99	65.010	Ictalurus_punctatus
ENSSMAG00000010176	-	99	57.864	ENSSTOG00000013936	EDC3	99	57.864	Ictidomys_tridecemlineatus
ENSSMAG00000010176	-	99	57.115	ENSJJAG00000008074	Edc3	99	57.115	Jaculus_jaculus
ENSSMAG00000010176	-	99	65.768	ENSKMAG00000001243	edc3	99	65.975	Kryptolebias_marmoratus
ENSSMAG00000010176	-	99	78.132	ENSKMAG00000001987	EDC3	99	78.132	Kryptolebias_marmoratus
ENSSMAG00000010176	-	99	77.521	ENSLBEG00000017984	EDC3	99	77.521	Labrus_bergylta
ENSSMAG00000010176	-	99	64.170	ENSLBEG00000013435	edc3	99	65.164	Labrus_bergylta
ENSSMAG00000010176	-	99	59.465	ENSLACG00000014149	EDC3	99	59.465	Latimeria_chalumnae
ENSSMAG00000010176	-	99	58.215	ENSLOCG00000014625	edc3	99	58.203	Lepisosteus_oculatus
ENSSMAG00000010176	-	99	57.364	ENSLAFG00000002992	EDC3	99	57.364	Loxodonta_africana
ENSSMAG00000010176	-	99	58.090	ENSMFAG00000043074	EDC3	99	58.090	Macaca_fascicularis
ENSSMAG00000010176	-	99	58.090	ENSMMUG00000011071	EDC3	99	58.090	Macaca_mulatta
ENSSMAG00000010176	-	99	58.090	ENSMNEG00000035316	EDC3	99	58.090	Macaca_nemestrina
ENSSMAG00000010176	-	99	57.895	ENSMLEG00000030372	EDC3	99	57.895	Mandrillus_leucophaeus
ENSSMAG00000010176	-	99	64.516	ENSMAMG00000000505	edc3	99	64.516	Mastacembelus_armatus
ENSSMAG00000010176	-	99	81.529	ENSMAMG00000005423	-	99	81.529	Mastacembelus_armatus
ENSSMAG00000010176	-	99	64.865	ENSMZEG00005004892	edc3	99	64.865	Maylandia_zebra
ENSSMAG00000010176	-	99	74.686	ENSMZEG00005005654	EDC3	99	74.686	Maylandia_zebra
ENSSMAG00000010176	-	99	57.339	ENSMGAG00000002617	EDC3	99	57.339	Meleagris_gallopavo
ENSSMAG00000010176	-	99	56.923	ENSMICG00000043190	EDC3	99	56.725	Microcebus_murinus
ENSSMAG00000010176	-	99	56.893	ENSMOCG00000016205	Edc3	99	56.893	Microtus_ochrogaster
ENSSMAG00000010176	-	99	66.320	ENSMMOG00000012278	edc3	99	66.320	Mola_mola
ENSSMAG00000010176	-	99	56.371	ENSMODG00000009442	EDC3	99	56.371	Monodelphis_domestica
ENSSMAG00000010176	-	99	66.598	ENSMALG00000008658	edc3	99	66.598	Monopterus_albus
ENSSMAG00000010176	-	99	56.556	MGP_CAROLIEiJ_G0032280	Edc3	100	70.769	Mus_caroli
ENSSMAG00000010176	-	99	56.385	ENSMUSG00000038957	Edc3	100	70.769	Mus_musculus
ENSSMAG00000010176	-	99	56.189	MGP_PahariEiJ_G0015146	Edc3	100	70.769	Mus_pahari
ENSSMAG00000010176	-	99	56.385	MGP_SPRETEiJ_G0033420	Edc3	100	70.769	Mus_spretus
ENSSMAG00000010176	-	99	57.505	ENSMPUG00000017293	EDC3	99	57.505	Mustela_putorius_furo
ENSSMAG00000010176	-	99	57.640	ENSMLUG00000016382	EDC3	99	57.640	Myotis_lucifugus
ENSSMAG00000010176	-	99	57.115	ENSNGAG00000010923	Edc3	99	57.115	Nannospalax_galili
ENSSMAG00000010176	-	99	74.375	ENSNBRG00000007881	EDC3	99	74.375	Neolamprologus_brichardi
ENSSMAG00000010176	-	99	64.938	ENSNBRG00000002434	edc3	99	64.938	Neolamprologus_brichardi
ENSSMAG00000010176	-	99	48.269	ENSNLEG00000014577	EDC3	99	48.269	Nomascus_leucogenys
ENSSMAG00000010176	-	99	56.947	ENSMEUG00000009077	EDC3	99	56.947	Notamacropus_eugenii
ENSSMAG00000010176	-	85	72.222	ENSOPRG00000009540	-	78	72.222	Ochotona_princeps
ENSSMAG00000010176	-	99	70.370	ENSONIG00000002932	-	99	70.370	Oreochromis_niloticus
ENSSMAG00000010176	-	99	65.145	ENSONIG00000008434	edc3	99	65.145	Oreochromis_niloticus
ENSSMAG00000010176	-	77	52.927	ENSOCUG00000017740	EDC3	86	52.927	Oryctolagus_cuniculus
ENSSMAG00000010176	-	99	65.145	ENSORLG00000004883	edc3	99	65.145	Oryzias_latipes
ENSSMAG00000010176	-	99	76.582	ENSORLG00000014399	-	98	76.582	Oryzias_latipes
ENSSMAG00000010176	-	99	65.560	ENSORLG00020012262	edc3	99	65.560	Oryzias_latipes_hni
ENSSMAG00000010176	-	99	76.582	ENSORLG00020019446	-	99	76.582	Oryzias_latipes_hni
ENSSMAG00000010176	-	99	76.793	ENSORLG00015017635	-	95	76.793	Oryzias_latipes_hsok
ENSSMAG00000010176	-	99	65.560	ENSORLG00015005634	edc3	99	65.560	Oryzias_latipes_hsok
ENSSMAG00000010176	-	99	65.489	ENSOMEG00000014026	edc3	99	65.489	Oryzias_melastigma
ENSSMAG00000010176	-	99	77.426	ENSOMEG00000017354	EDC3	99	77.426	Oryzias_melastigma
ENSSMAG00000010176	-	99	57.364	ENSOGAG00000014441	EDC3	99	57.895	Otolemur_garnettii
ENSSMAG00000010176	-	99	56.405	ENSOARG00000003476	EDC3	99	57.915	Ovis_aries
ENSSMAG00000010176	-	99	56.538	ENSPPAG00000040143	EDC3	99	56.538	Pan_paniscus
ENSSMAG00000010176	-	99	56.725	ENSPPRG00000006257	EDC3	99	56.725	Panthera_pardus
ENSSMAG00000010176	-	99	56.725	ENSPTIG00000017424	EDC3	99	56.725	Panthera_tigris_altaica
ENSSMAG00000010176	-	99	56.538	ENSPTRG00000007279	EDC3	99	56.538	Pan_troglodytes
ENSSMAG00000010176	-	99	57.895	ENSPANG00000015997	EDC3	99	57.895	Papio_anubis
ENSSMAG00000010176	-	99	62.846	ENSPKIG00000004416	edc3	99	62.846	Paramormyrops_kingsleyae
ENSSMAG00000010176	-	99	63.434	ENSPKIG00000019810	EDC3	99	63.434	Paramormyrops_kingsleyae
ENSSMAG00000010176	-	99	53.125	ENSPSIG00000008474	EDC3	99	54.102	Pelodiscus_sinensis
ENSSMAG00000010176	-	99	63.883	ENSPMGG00000007223	edc3	99	63.883	Periophthalmus_magnuspinnatus
ENSSMAG00000010176	-	99	57.282	ENSPEMG00000015260	Edc3	99	57.282	Peromyscus_maniculatus_bairdii
ENSSMAG00000010176	-	99	57.143	ENSPCIG00000006276	EDC3	70	57.143	Phascolarctos_cinereus
ENSSMAG00000010176	-	99	65.904	ENSPFOG00000012204	edc3	99	65.904	Poecilia_formosa
ENSSMAG00000010176	-	99	65.904	ENSPLAG00000014420	edc3	99	65.904	Poecilia_latipinna
ENSSMAG00000010176	-	99	65.904	ENSPMEG00000023289	edc3	99	65.904	Poecilia_mexicana
ENSSMAG00000010176	-	99	65.631	ENSPREG00000016022	edc3	99	65.631	Poecilia_reticulata
ENSSMAG00000010176	-	99	55.577	ENSPPYG00000006642	EDC3	99	55.577	Pongo_abelii
ENSSMAG00000010176	-	85	72.222	ENSPCAG00000002802	EDC3	78	72.222	Procavia_capensis
ENSSMAG00000010176	-	99	56.923	ENSPCOG00000013364	EDC3	99	56.923	Propithecus_coquereli
ENSSMAG00000010176	-	99	57.700	ENSPVAG00000014733	EDC3	99	57.700	Pteropus_vampyrus
ENSSMAG00000010176	-	99	75.584	ENSPNYG00000009669	EDC3	99	75.584	Pundamilia_nyererei
ENSSMAG00000010176	-	99	65.073	ENSPNYG00000021797	edc3	99	65.073	Pundamilia_nyererei
ENSSMAG00000010176	-	99	62.062	ENSPNAG00000019657	edc3	99	62.062	Pygocentrus_nattereri
ENSSMAG00000010176	-	99	57.310	ENSRNOG00000019579	Edc3	99	56.863	Rattus_norvegicus
ENSSMAG00000010176	-	99	57.895	ENSRBIG00000019488	EDC3	99	57.895	Rhinopithecus_bieti
ENSSMAG00000010176	-	99	57.895	ENSRROG00000034959	EDC3	99	57.895	Rhinopithecus_roxellana
ENSSMAG00000010176	-	99	56.897	ENSSBOG00000004896	EDC3	99	56.897	Saimiri_boliviensis_boliviensis
ENSSMAG00000010176	-	99	54.921	ENSSHAG00000015075	EDC3	98	54.921	Sarcophilus_harrisii
ENSSMAG00000010176	-	99	65.269	ENSSFOG00015016939	edc3	99	65.269	Scleropages_formosus
ENSSMAG00000010176	-	99	66.454	ENSSFOG00015002439	edc3	99	66.454	Scleropages_formosus
ENSSMAG00000010176	-	99	87.712	ENSSDUG00000007671	EDC3	99	87.712	Seriola_dumerili
ENSSMAG00000010176	-	99	66.183	ENSSDUG00000021844	edc3	99	66.183	Seriola_dumerili
ENSSMAG00000010176	-	99	66.183	ENSSLDG00000022046	edc3	99	66.183	Seriola_lalandi_dorsalis
ENSSMAG00000010176	-	81	75.203	ENSSARG00000003907	EDC3	75	75.203	Sorex_araneus
ENSSMAG00000010176	-	99	57.115	ENSSPUG00000008232	EDC3	99	57.115	Sphenodon_punctatus
ENSSMAG00000010176	-	99	65.839	ENSSPAG00000010009	edc3	99	65.839	Stegastes_partitus
ENSSMAG00000010176	-	99	81.857	ENSSPAG00000020327	EDC3	99	81.857	Stegastes_partitus
ENSSMAG00000010176	-	99	60.960	ENSSSCG00000001903	EDC3	99	60.960	Sus_scrofa
ENSSMAG00000010176	-	99	57.143	ENSTGUG00000004007	EDC3	99	57.143	Taeniopygia_guttata
ENSSMAG00000010176	-	99	65.762	ENSTRUG00000017078	edc3	99	65.762	Takifugu_rubripes
ENSSMAG00000010176	-	99	65.010	ENSTNIG00000016047	edc3	99	65.010	Tetraodon_nigroviridis
ENSSMAG00000010176	-	99	57.339	ENSTTRG00000007990	EDC3	99	57.339	Tursiops_truncatus
ENSSMAG00000010176	-	99	56.725	ENSUAMG00000026710	-	99	56.725	Ursus_americanus
ENSSMAG00000010176	-	99	56.725	ENSUMAG00000005006	EDC3	95	56.725	Ursus_maritimus
ENSSMAG00000010176	-	85	64.815	ENSVPAG00000003499	-	78	64.815	Vicugna_pacos
ENSSMAG00000010176	-	99	57.310	ENSVVUG00000018601	EDC3	99	56.530	Vulpes_vulpes
ENSSMAG00000010176	-	74	65.812	ENSXETG00000010622	edc3	99	65.537	Xenopus_tropicalis
ENSSMAG00000010176	-	99	65.768	ENSXMAG00000007377	edc3	99	65.696	Xiphophorus_maculatus