EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSSMAG00000010246 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Scophthalmus_maximus
Status: putative
Strand: Minus strand
Length: 1452 bases
Position: chr13:6129345-6130796
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSMAP00000016751	RRM_1	PF00076.22	1.4e-29	1	2
ENSSMAP00000016751	RRM_1	PF00076.22	1.4e-29	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSMAT00000016959	-	681	-	ENSSMAP00000016751	226 (aa)	-	-

Gene Model

Click here to download ENSSMAG00000010246's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSMAG00000010246's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSSMAG00000010246	-	78	69.048	ENSSMAG00000010279	-	94	69.048
ENSSMAG00000010246	-	75	44.156	ENSSMAG00000003760	hnrnpaba	70	44.156
ENSSMAG00000010246	-	86	37.297	ENSSMAG00000018484	msi2a	55	38.372
ENSSMAG00000010246	-	85	38.202	ENSSMAG00000018824	MSI1	52	37.736
ENSSMAG00000010246	-	69	31.126	ENSSMAG00000010516	pabpc1l	53	31.126
ENSSMAG00000010246	-	79	54.237	ENSSMAG00000004641	hnrnpa1a	57	54.545
ENSSMAG00000010246	-	81	40.110	ENSSMAG00000021047	dazap1	51	38.235
ENSSMAG00000010246	-	75	35.294	ENSSMAG00000009686	hnrnpd	52	35.088

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSMAG00000010246	-	83	55.851	ENSAPOG00000019369	-	53	55.682	Acanthochromis_polyacanthus
ENSSMAG00000010246	-	79	86.592	ENSACIG00000021815	-	87	86.592	Amphilophus_citrinellus
ENSSMAG00000010246	-	83	55.851	ENSAOCG00000005289	-	52	56.322	Amphiprion_ocellaris
ENSSMAG00000010246	-	83	55.851	ENSAPEG00000004179	-	52	56.322	Amphiprion_percula
ENSSMAG00000010246	-	78	72.050	ENSATEG00000003423	-	76	72.500	Anabas_testudineus
ENSSMAG00000010246	-	83	54.255	ENSATEG00000022918	hnrnpa1a	83	54.545	Anabas_testudineus
ENSSMAG00000010246	-	78	60.452	ENSACAG00000017109	-	54	60.452	Anolis_carolinensis
ENSSMAG00000010246	-	79	55.367	ENSACLG00000006940	-	53	55.682	Astatotilapia_calliptera
ENSSMAG00000010246	-	77	55.747	ENSAMXG00000006296	hnrnpa1a	52	54.359	Astyanax_mexicanus
ENSSMAG00000010246	-	78	72.571	ENSAMXG00000037730	-	51	72.989	Astyanax_mexicanus
ENSSMAG00000010246	-	88	52.284	ENSCSEG00000007589	hnrnpa1a	65	53.977	Cynoglossus_semilaevis
ENSSMAG00000010246	-	81	65.761	ENSCSEG00000014051	-	72	68.182	Cynoglossus_semilaevis
ENSSMAG00000010246	-	78	56.250	ENSCVAG00000012637	hnrnpa1a	52	56.250	Cyprinodon_variegatus
ENSSMAG00000010246	-	83	62.500	ENSDORG00000026425	-	51	63.068	Dipodomys_ordii
ENSSMAG00000010246	-	78	73.563	ENSGMOG00000020353	-	91	73.563	Gadus_morhua
ENSSMAG00000010246	-	83	56.915	ENSGAFG00000007751	-	52	56.250	Gambusia_affinis
ENSSMAG00000010246	-	80	83.333	ENSGAFG00000016803	-	59	83.417	Gambusia_affinis
ENSSMAG00000010246	-	79	55.367	ENSHBUG00000005647	hnrnpa1a	53	55.682	Haplochromis_burtoni
ENSSMAG00000010246	-	80	75.691	ENSIPUG00000001991	-	77	76.111	Ictalurus_punctatus
ENSSMAG00000010246	-	82	53.757	ENSIPUG00000022440	-	70	56.442	Ictalurus_punctatus
ENSSMAG00000010246	-	82	50.820	ENSIPUG00000002023	hnrnpa1a	76	49.246	Ictalurus_punctatus
ENSSMAG00000010246	-	78	55.114	ENSKMAG00000020859	-	52	55.114	Kryptolebias_marmoratus
ENSSMAG00000010246	-	79	55.367	ENSLBEG00000010010	hnrnpa1a	51	55.682	Labrus_bergylta
ENSSMAG00000010246	-	78	47.191	ENSMFAG00000028351	-	62	46.602	Macaca_fascicularis
ENSSMAG00000010246	-	86	53.886	ENSMAMG00000007606	-	52	55.114	Mastacembelus_armatus
ENSSMAG00000010246	-	79	55.367	ENSMZEG00005027173	hnrnpa1a	53	55.682	Maylandia_zebra
ENSSMAG00000010246	-	79	55.056	ENSMMOG00000008251	hnrnpa1a	82	50.971	Mola_mola
ENSSMAG00000010246	-	80	87.222	ENSMALG00000008886	-	94	84.925	Monopterus_albus
ENSSMAG00000010246	-	83	54.011	ENSMALG00000014091	hnrnpa1a	51	54.545	Monopterus_albus
ENSSMAG00000010246	-	79	71.910	ENSNBRG00000014469	-	83	71.910	Neolamprologus_brichardi
ENSSMAG00000010246	-	79	55.367	ENSNBRG00000018441	-	53	55.682	Neolamprologus_brichardi
ENSSMAG00000010246	-	89	54.146	ENSORLG00000029240	-	96	57.865	Oryzias_latipes
ENSSMAG00000010246	-	78	56.250	ENSORLG00000008001	-	53	56.250	Oryzias_latipes
ENSSMAG00000010246	-	78	60.000	ENSORLG00020006043	-	61	60.000	Oryzias_latipes_hni
ENSSMAG00000010246	-	79	55.932	ENSORLG00020006582	hnrnpa1a	82	56.250	Oryzias_latipes_hni
ENSSMAG00000010246	-	89	51.691	ENSORLG00020022498	-	94	51.220	Oryzias_latipes_hni
ENSSMAG00000010246	-	79	55.367	ENSORLG00015022294	-	53	55.682	Oryzias_latipes_hsok
ENSSMAG00000010246	-	79	55.367	ENSOMEG00000015959	-	53	55.682	Oryzias_melastigma
ENSSMAG00000010246	-	78	69.714	ENSPMGG00000016392	-	88	69.714	Periophthalmus_magnuspinnatus
ENSSMAG00000010246	-	80	55.556	ENSPMGG00000011804	hnrnpa1a	83	48.889	Periophthalmus_magnuspinnatus
ENSSMAG00000010246	-	88	51.598	ENSPFOG00000001825	-	52	56.250	Poecilia_formosa
ENSSMAG00000010246	-	88	51.598	ENSPMEG00000002425	-	52	56.250	Poecilia_mexicana
ENSSMAG00000010246	-	79	71.910	ENSPNYG00000020729	-	91	71.910	Pundamilia_nyererei
ENSSMAG00000010246	-	78	50.857	ENSPNAG00000007752	hnrnpa1a	84	47.867	Pygocentrus_nattereri
ENSSMAG00000010246	-	83	56.452	ENSPNAG00000021630	-	56	57.471	Pygocentrus_nattereri
ENSSMAG00000010246	-	88	52.792	ENSSDUG00000013908	hnrnpa1a	94	51.185	Seriola_dumerili
ENSSMAG00000010246	-	79	70.621	ENSSDUG00000002431	-	87	71.676	Seriola_dumerili
ENSSMAG00000010246	-	81	55.435	ENSSLDG00000003718	hnrnpa1a	79	54.545	Seriola_lalandi_dorsalis
ENSSMAG00000010246	-	82	55.676	ENSSPAG00000018518	-	53	56.322	Stegastes_partitus
ENSSMAG00000010246	-	84	53.191	ENSTRUG00000020491	-	54	53.409	Takifugu_rubripes
ENSSMAG00000010246	-	83	70.588	ENSTNIG00000007398	-	68	71.910	Tetraodon_nigroviridis
ENSSMAG00000010246	-	79	55.618	ENSXCOG00000009001	-	76	55.682	Xiphophorus_couchianus
ENSSMAG00000010246	-	88	51.142	ENSXMAG00000008076	-	52	55.682	Xiphophorus_maculatus