EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSSMAG00000010279 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Scophthalmus_maximus
Status: putative
Strand: Minus strand
Length: 3705 bases
Position: chr13:6133009-6136713
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSMAP00000016809	RRM_1	PF00076.22	7e-34	1	2
ENSSMAP00000016809	RRM_1	PF00076.22	7e-34	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSMAT00000017017	-	537	-	ENSSMAP00000016809	178 (aa)	-	-

Gene Model

Click here to download ENSSMAG00000010279's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSMAG00000010279's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSSMAG00000010279	-	93	57.229	ENSSMAG00000004641	hnrnpa1a	58	57.229
ENSSMAG00000010279	-	93	36.111	ENSSMAG00000003760	hnrnpaba	70	36.111
ENSSMAG00000010279	-	92	33.929	ENSSMAG00000016401	tardbp	50	34.862
ENSSMAG00000010279	-	91	35.443	ENSSMAG00000018824	MSI1	52	35.443
ENSSMAG00000010279	-	97	36.232	ENSSMAG00000006881	elavl4	58	36.232
ENSSMAG00000010279	-	94	36.905	ENSSMAG00000021047	dazap1	56	35.484
ENSSMAG00000010279	-	94	35.185	ENSSMAG00000018484	msi2a	59	35.185
ENSSMAG00000010279	-	92	35.211	ENSSMAG00000017715	tardbpl	55	35.211
ENSSMAG00000010279	-	91	37.037	ENSSMAG00000009686	hnrnpd	52	37.037
ENSSMAG00000010279	-	94	36.232	ENSSMAG00000010745	ELAVL2	55	36.232
ENSSMAG00000010279	-	94	69.048	ENSSMAG00000010246	-	78	69.048

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSMAG00000010279	-	93	58.434	ENSAPOG00000019369	-	54	58.434	Acanthochromis_polyacanthus
ENSSMAG00000010279	-	94	70.238	ENSACIG00000021815	-	86	70.238	Amphilophus_citrinellus
ENSSMAG00000010279	-	93	58.434	ENSAOCG00000005289	-	54	58.434	Amphiprion_ocellaris
ENSSMAG00000010279	-	93	58.434	ENSAPEG00000004179	-	54	58.434	Amphiprion_percula
ENSSMAG00000010279	-	94	90.062	ENSATEG00000003423	-	76	90.062	Anabas_testudineus
ENSSMAG00000010279	-	93	58.434	ENSATEG00000022918	hnrnpa1a	85	58.434	Anabas_testudineus
ENSSMAG00000010279	-	94	70.060	ENSACAG00000017109	-	54	70.060	Anolis_carolinensis
ENSSMAG00000010279	-	93	59.639	ENSACLG00000006940	-	53	59.639	Astatotilapia_calliptera
ENSSMAG00000010279	-	93	78.313	ENSAMXG00000037730	-	52	78.313	Astyanax_mexicanus
ENSSMAG00000010279	-	95	86.391	ENSCSEG00000014051	-	74	86.391	Cynoglossus_semilaevis
ENSSMAG00000010279	-	93	59.036	ENSCSEG00000007589	hnrnpa1a	67	59.036	Cynoglossus_semilaevis
ENSSMAG00000010279	-	93	59.036	ENSCVAG00000012637	hnrnpa1a	53	59.036	Cyprinodon_variegatus
ENSSMAG00000010279	-	94	71.856	ENSDORG00000026425	-	50	72.727	Dipodomys_ordii
ENSSMAG00000010279	-	93	57.229	ENSELUG00000007372	-	50	57.229	Esox_lucius
ENSSMAG00000010279	-	94	74.850	ENSGMOG00000020353	-	92	74.850	Gadus_morhua
ENSSMAG00000010279	-	94	69.643	ENSGAFG00000016803	-	53	69.643	Gambusia_affinis
ENSSMAG00000010279	-	93	59.036	ENSGAFG00000007751	-	53	59.036	Gambusia_affinis
ENSSMAG00000010279	-	93	59.639	ENSHBUG00000005647	hnrnpa1a	54	59.639	Haplochromis_burtoni
ENSSMAG00000010279	-	95	80.473	ENSIPUG00000001991	-	75	80.473	Ictalurus_punctatus
ENSSMAG00000010279	-	93	57.516	ENSIPUG00000002023	hnrnpa1a	75	56.970	Ictalurus_punctatus
ENSSMAG00000010279	-	93	58.434	ENSIPUG00000022440	-	70	58.170	Ictalurus_punctatus
ENSSMAG00000010279	-	93	59.639	ENSKMAG00000020859	-	53	59.639	Kryptolebias_marmoratus
ENSSMAG00000010279	-	93	59.036	ENSLBEG00000010010	hnrnpa1a	51	59.036	Labrus_bergylta
ENSSMAG00000010279	-	93	59.036	ENSMAMG00000007606	-	53	59.036	Mastacembelus_armatus
ENSSMAG00000010279	-	93	59.639	ENSMZEG00005027173	hnrnpa1a	54	59.639	Maylandia_zebra
ENSSMAG00000010279	-	93	58.434	ENSMMOG00000008251	hnrnpa1a	74	58.434	Mola_mola
ENSSMAG00000010279	-	94	69.643	ENSMALG00000008886	-	86	69.643	Monopterus_albus
ENSSMAG00000010279	-	93	58.434	ENSMALG00000014091	hnrnpa1a	52	58.434	Monopterus_albus
ENSSMAG00000010279	-	93	59.639	ENSNBRG00000018441	-	54	59.639	Neolamprologus_brichardi
ENSSMAG00000010279	-	94	88.690	ENSNBRG00000014469	-	82	88.690	Neolamprologus_brichardi
ENSSMAG00000010279	-	94	66.071	ENSORLG00000029240	-	94	66.071	Oryzias_latipes
ENSSMAG00000010279	-	93	59.639	ENSORLG00000008001	-	54	59.639	Oryzias_latipes
ENSSMAG00000010279	-	94	66.667	ENSORLG00020022498	-	79	66.667	Oryzias_latipes_hni
ENSSMAG00000010279	-	93	60.000	ENSORLG00020006582	hnrnpa1a	81	60.000	Oryzias_latipes_hni
ENSSMAG00000010279	-	92	70.552	ENSORLG00020006043	-	60	70.552	Oryzias_latipes_hni
ENSSMAG00000010279	-	93	59.639	ENSORLG00015022294	-	54	59.639	Oryzias_latipes_hsok
ENSSMAG00000010279	-	93	59.639	ENSOMEG00000015959	-	65	59.639	Oryzias_melastigma
ENSSMAG00000010279	-	93	61.438	ENSPMGG00000011804	hnrnpa1a	74	60.241	Periophthalmus_magnuspinnatus
ENSSMAG00000010279	-	94	85.119	ENSPMGG00000016392	-	94	85.119	Periophthalmus_magnuspinnatus
ENSSMAG00000010279	-	93	59.036	ENSPFOG00000001825	-	53	59.036	Poecilia_formosa
ENSSMAG00000010279	-	93	59.036	ENSPMEG00000002425	-	53	59.036	Poecilia_mexicana
ENSSMAG00000010279	-	94	88.690	ENSPNYG00000020729	-	90	88.690	Pundamilia_nyererei
ENSSMAG00000010279	-	93	59.868	ENSPNAG00000007752	hnrnpa1a	73	58.434	Pygocentrus_nattereri
ENSSMAG00000010279	-	93	59.639	ENSPNAG00000021630	-	56	59.639	Pygocentrus_nattereri
ENSSMAG00000010279	-	94	58.929	ENSSDUG00000013908	hnrnpa1a	82	58.929	Seriola_dumerili
ENSSMAG00000010279	-	99	86.932	ENSSDUG00000002431	-	84	86.932	Seriola_dumerili
ENSSMAG00000010279	-	93	59.740	ENSSLDG00000003718	hnrnpa1a	77	58.824	Seriola_lalandi_dorsalis
ENSSMAG00000010279	-	93	58.434	ENSSPAG00000018518	-	65	58.434	Stegastes_partitus
ENSSMAG00000010279	-	93	57.831	ENSTRUG00000020491	-	64	57.831	Takifugu_rubripes
ENSSMAG00000010279	-	94	87.500	ENSTNIG00000007398	-	68	87.500	Tetraodon_nigroviridis
ENSSMAG00000010279	-	93	59.119	ENSXCOG00000009001	-	77	59.036	Xiphophorus_couchianus
ENSSMAG00000010279	-	93	59.036	ENSXMAG00000008076	-	52	59.036	Xiphophorus_maculatus