EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSSMAG00000010350 (Gene tree)
Gene ID: -
Gene Symbol: ptcd2
Alias: zgc:112401
Full Name: pentatricopeptide repeat domain 2
Gene Type: protein_coding
Species: Scophthalmus_maximus
Status: putative
Strand: Minus strand
Length: 3612 bases
Position: chr16:13569929-13573540
Accession: ZDB-GENE-050417-82
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSMAP00000016874	MRP-S27	PF10037.9	2.2e-08	1	1
ENSSMAP00000016867	MRP-S27	PF10037.9	4e-08	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSMAT00000017082	-	1285	-	ENSSMAP00000016874	384 (aa)	-	A0A2U9CGC7
ENSSMAT00000017075	-	1303	-	ENSSMAP00000016867	390 (aa)	-	-

Gene Model

Click here to download ENSSMAG00000010350's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSMAG00000010350's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSMAG00000010350	ptcd2	90	44.380	ENSG00000049883	PTCD2	100	36.453	Homo_sapiens
ENSSMAG00000010350	ptcd2	100	68.312	ENSAPOG00000020682	ptcd2	100	68.312	Acanthochromis_polyacanthus
ENSSMAG00000010350	ptcd2	90	44.669	ENSAMEG00000007194	PTCD2	89	44.669	Ailuropoda_melanoleuca
ENSSMAG00000010350	ptcd2	90	63.218	ENSACIG00000002053	ptcd2	100	63.218	Amphilophus_citrinellus
ENSSMAG00000010350	ptcd2	100	67.013	ENSAOCG00000006616	ptcd2	98	67.013	Amphiprion_ocellaris
ENSSMAG00000010350	ptcd2	100	67.013	ENSAPEG00000022926	ptcd2	98	67.013	Amphiprion_percula
ENSSMAG00000010350	ptcd2	92	46.893	ENSACAG00000009747	PTCD2	91	46.893	Anolis_carolinensis
ENSSMAG00000010350	ptcd2	90	42.651	ENSANAG00000029353	PTCD2	89	42.651	Aotus_nancymaae
ENSSMAG00000010350	ptcd2	100	67.532	ENSACLG00000027742	ptcd2	98	67.532	Astatotilapia_calliptera
ENSSMAG00000010350	ptcd2	92	48.315	ENSAMXG00000029404	ptcd2	94	48.315	Astyanax_mexicanus
ENSSMAG00000010350	ptcd2	90	44.092	ENSBTAG00000014675	PTCD2	90	44.092	Bos_taurus
ENSSMAG00000010350	ptcd2	90	41.787	ENSCJAG00000016364	PTCD2	89	41.787	Callithrix_jacchus
ENSSMAG00000010350	ptcd2	90	45.533	ENSCAFG00000007982	PTCD2	81	45.533	Canis_familiaris
ENSSMAG00000010350	ptcd2	90	45.376	ENSCAFG00020019147	PTCD2	97	45.376	Canis_lupus_dingo
ENSSMAG00000010350	ptcd2	90	44.380	ENSCHIG00000017118	PTCD2	90	44.380	Capra_hircus
ENSSMAG00000010350	ptcd2	91	43.380	ENSCPOG00000040168	PTCD2	91	43.678	Cavia_porcellus
ENSSMAG00000010350	ptcd2	90	43.228	ENSCCAG00000029389	-	89	43.228	Cebus_capucinus
ENSSMAG00000010350	ptcd2	74	44.097	ENSCCAG00000021996	-	86	44.803	Cebus_capucinus
ENSSMAG00000010350	ptcd2	95	44.267	ENSCATG00000019069	PTCD2	98	44.267	Cercocebus_atys
ENSSMAG00000010350	ptcd2	99	43.455	ENSCLAG00000000072	PTCD2	96	43.455	Chinchilla_lanigera
ENSSMAG00000010350	ptcd2	90	45.245	ENSCSAG00000015623	PTCD2	98	43.467	Chlorocebus_sabaeus
ENSSMAG00000010350	ptcd2	72	52.941	ENSCHOG00000010634	PTCD2	79	52.941	Choloepus_hoffmanni
ENSSMAG00000010350	ptcd2	92	45.682	ENSCPBG00000000216	PTCD2	90	46.154	Chrysemys_picta_bellii
ENSSMAG00000010350	ptcd2	90	45.533	ENSCANG00000035636	PTCD2	89	45.533	Colobus_angolensis_palliatus
ENSSMAG00000010350	ptcd2	93	42.663	ENSCGRG00001015289	Ptcd2	81	42.663	Cricetulus_griseus_chok1gshd
ENSSMAG00000010350	ptcd2	93	42.663	ENSCGRG00000006193	Ptcd2	81	42.663	Cricetulus_griseus_crigri
ENSSMAG00000010350	ptcd2	94	64.420	ENSCVAG00000001285	ptcd2	95	64.420	Cyprinodon_variegatus
ENSSMAG00000010350	ptcd2	96	51.337	ENSDARG00000035391	ptcd2	98	51.337	Danio_rerio
ENSSMAG00000010350	ptcd2	96	44.267	ENSDNOG00000008719	PTCD2	98	44.267	Dasypus_novemcinctus
ENSSMAG00000010350	ptcd2	92	44.789	ENSDORG00000004921	Ptcd2	92	44.789	Dipodomys_ordii
ENSSMAG00000010350	ptcd2	92	42.667	ENSETEG00000016542	PTCD2	95	42.667	Echinops_telfairi
ENSSMAG00000010350	ptcd2	90	44.669	ENSEASG00005018038	PTCD2	91	44.669	Equus_asinus_asinus
ENSSMAG00000010350	ptcd2	99	42.526	ENSECAG00000007022	PTCD2	100	42.526	Equus_caballus
ENSSMAG00000010350	ptcd2	90	43.516	ENSEEUG00000014031	PTCD2	90	43.516	Erinaceus_europaeus
ENSSMAG00000010350	ptcd2	90	59.366	ENSELUG00000003584	ptcd2	91	59.366	Esox_lucius
ENSSMAG00000010350	ptcd2	83	43.653	ENSFCAG00000045432	PTCD2	74	44.479	Felis_catus
ENSSMAG00000010350	ptcd2	85	41.284	ENSFALG00000010299	PTCD2	99	41.284	Ficedula_albicollis
ENSSMAG00000010350	ptcd2	94	43.052	ENSFDAG00000018461	PTCD2	96	43.052	Fukomys_damarensis
ENSSMAG00000010350	ptcd2	99	58.398	ENSGMOG00000003637	ptcd2	99	58.398	Gadus_morhua
ENSSMAG00000010350	ptcd2	92	40.960	ENSGALG00000038260	PTCD2	99	39.894	Gallus_gallus
ENSSMAG00000010350	ptcd2	91	49.288	ENSGAGG00000021952	PTCD2	90	49.288	Gopherus_agassizii
ENSSMAG00000010350	ptcd2	90	44.380	ENSGGOG00000010695	PTCD2	89	44.380	Gorilla_gorilla
ENSSMAG00000010350	ptcd2	100	66.753	ENSHBUG00000009191	ptcd2	98	66.753	Haplochromis_burtoni
ENSSMAG00000010350	ptcd2	94	44.262	ENSHGLG00000001234	PTCD2	94	45.000	Heterocephalus_glaber_female
ENSSMAG00000010350	ptcd2	94	44.262	ENSHGLG00100015419	PTCD2	94	45.000	Heterocephalus_glaber_male
ENSSMAG00000010350	ptcd2	100	63.636	ENSHCOG00000001703	ptcd2	100	63.636	Hippocampus_comes
ENSSMAG00000010350	ptcd2	95	51.639	ENSIPUG00000006080	ptcd2	99	52.094	Ictalurus_punctatus
ENSSMAG00000010350	ptcd2	90	44.540	ENSSTOG00000006596	PTCD2	91	44.540	Ictidomys_tridecemlineatus
ENSSMAG00000010350	ptcd2	90	44.669	ENSJJAG00000024388	Ptcd2	91	44.669	Jaculus_jaculus
ENSSMAG00000010350	ptcd2	92	57.790	ENSKMAG00000009329	ptcd2	92	57.790	Kryptolebias_marmoratus
ENSSMAG00000010350	ptcd2	100	62.338	ENSLBEG00000024871	ptcd2	98	62.338	Labrus_bergylta
ENSSMAG00000010350	ptcd2	100	50.386	ENSLOCG00000011122	ptcd2	100	50.386	Lepisosteus_oculatus
ENSSMAG00000010350	ptcd2	78	45.192	ENSLAFG00000004115	PTCD2	99	45.833	Loxodonta_africana
ENSSMAG00000010350	ptcd2	90	46.110	ENSMFAG00000031516	PTCD2	89	46.110	Macaca_fascicularis
ENSSMAG00000010350	ptcd2	90	45.821	ENSMNEG00000007537	PTCD2	91	45.821	Macaca_nemestrina
ENSSMAG00000010350	ptcd2	90	45.821	ENSMLEG00000031093	PTCD2	89	45.821	Mandrillus_leucophaeus
ENSSMAG00000010350	ptcd2	100	65.903	ENSMAMG00000018529	ptcd2	100	65.903	Mastacembelus_armatus
ENSSMAG00000010350	ptcd2	100	67.532	ENSMZEG00005003625	ptcd2	98	67.532	Maylandia_zebra
ENSSMAG00000010350	ptcd2	90	42.075	ENSMGAG00000005033	PTCD2	99	42.075	Meleagris_gallopavo
ENSSMAG00000010350	ptcd2	91	49.289	ENSMAUG00000020253	Ptcd2	90	37.429	Mesocricetus_auratus
ENSSMAG00000010350	ptcd2	97	44.737	ENSMICG00000004535	PTCD2	98	44.737	Microcebus_murinus
ENSSMAG00000010350	ptcd2	91	44.000	ENSMOCG00000019985	Ptcd2	92	44.000	Microtus_ochrogaster
ENSSMAG00000010350	ptcd2	95	46.978	ENSMODG00000001695	PTCD2	95	46.978	Monodelphis_domestica
ENSSMAG00000010350	ptcd2	100	67.969	ENSMALG00000022372	ptcd2	100	67.969	Monopterus_albus
ENSSMAG00000010350	ptcd2	91	44.000	MGP_CAROLIEiJ_G0018829	Ptcd2	92	44.000	Mus_caroli
ENSSMAG00000010350	ptcd2	91	43.714	ENSMUSG00000021650	Ptcd2	92	43.714	Mus_musculus
ENSSMAG00000010350	ptcd2	90	44.380	MGP_PahariEiJ_G0015904	Ptcd2	91	44.380	Mus_pahari
ENSSMAG00000010350	ptcd2	91	44.286	MGP_SPRETEiJ_G0019711	Ptcd2	92	44.286	Mus_spretus
ENSSMAG00000010350	ptcd2	90	44.957	ENSMPUG00000014401	PTCD2	91	44.957	Mustela_putorius_furo
ENSSMAG00000010350	ptcd2	90	44.092	ENSMLUG00000007374	PTCD2	89	44.092	Myotis_lucifugus
ENSSMAG00000010350	ptcd2	96	41.534	ENSNGAG00000005027	Ptcd2	99	41.534	Nannospalax_galili
ENSSMAG00000010350	ptcd2	100	67.273	ENSNBRG00000008174	ptcd2	100	67.273	Neolamprologus_brichardi
ENSSMAG00000010350	ptcd2	86	65.957	ENSNBRG00000000092	-	100	65.957	Neolamprologus_brichardi
ENSSMAG00000010350	ptcd2	90	43.516	ENSNLEG00000004516	PTCD2	89	43.516	Nomascus_leucogenys
ENSSMAG00000010350	ptcd2	78	40.000	ENSMEUG00000014012	-	80	39.739	Notamacropus_eugenii
ENSSMAG00000010350	ptcd2	90	42.939	ENSOPRG00000007290	PTCD2	89	42.939	Ochotona_princeps
ENSSMAG00000010350	ptcd2	90	45.821	ENSODEG00000016417	PTCD2	91	45.821	Octodon_degus
ENSSMAG00000010350	ptcd2	86	66.465	ENSONIG00000011269	ptcd2	96	66.465	Oreochromis_niloticus
ENSSMAG00000010350	ptcd2	90	45.533	ENSOCUG00000007970	PTCD2	91	45.533	Oryctolagus_cuniculus
ENSSMAG00000010350	ptcd2	92	64.306	ENSORLG00000003851	ptcd2	91	64.306	Oryzias_latipes
ENSSMAG00000010350	ptcd2	92	63.173	ENSORLG00020009823	ptcd2	92	63.173	Oryzias_latipes_hni
ENSSMAG00000010350	ptcd2	90	61.739	ENSORLG00015016777	ptcd2	99	61.739	Oryzias_latipes_hsok
ENSSMAG00000010350	ptcd2	99	61.155	ENSOMEG00000012396	ptcd2	92	61.155	Oryzias_melastigma
ENSSMAG00000010350	ptcd2	90	45.533	ENSOGAG00000008390	PTCD2	89	45.533	Otolemur_garnettii
ENSSMAG00000010350	ptcd2	90	44.669	ENSOARG00000005087	PTCD2	89	44.669	Ovis_aries
ENSSMAG00000010350	ptcd2	90	44.380	ENSPPAG00000028480	PTCD2	89	44.380	Pan_paniscus
ENSSMAG00000010350	ptcd2	90	44.669	ENSPTRG00000016968	PTCD2	89	44.669	Pan_troglodytes
ENSSMAG00000010350	ptcd2	90	45.507	ENSPANG00000006611	PTCD2	89	45.507	Papio_anubis
ENSSMAG00000010350	ptcd2	100	49.096	ENSPKIG00000019896	ptcd2	100	49.096	Paramormyrops_kingsleyae
ENSSMAG00000010350	ptcd2	80	47.727	ENSPSIG00000014559	PTCD2	95	47.727	Pelodiscus_sinensis
ENSSMAG00000010350	ptcd2	90	44.986	ENSPEMG00000000884	Ptcd2	91	44.986	Peromyscus_maniculatus_bairdii
ENSSMAG00000010350	ptcd2	97	44.828	ENSPCIG00000029047	PTCD2	98	44.828	Phascolarctos_cinereus
ENSSMAG00000010350	ptcd2	94	63.807	ENSPLAG00000010456	ptcd2	97	63.807	Poecilia_latipinna
ENSSMAG00000010350	ptcd2	94	64.420	ENSPREG00000021797	ptcd2	95	64.420	Poecilia_reticulata
ENSSMAG00000010350	ptcd2	90	38.329	ENSPPYG00000015543	PTCD2	88	38.329	Pongo_abelii
ENSSMAG00000010350	ptcd2	73	40.351	ENSPCAG00000006806	PTCD2	91	40.351	Procavia_capensis
ENSSMAG00000010350	ptcd2	90	43.516	ENSPVAG00000010935	PTCD2	89	43.516	Pteropus_vampyrus
ENSSMAG00000010350	ptcd2	100	67.273	ENSPNYG00000003122	ptcd2	98	67.273	Pundamilia_nyererei
ENSSMAG00000010350	ptcd2	100	56.298	ENSPNAG00000021490	ptcd2	100	56.298	Pygocentrus_nattereri
ENSSMAG00000010350	ptcd2	91	45.143	ENSRNOG00000028403	Ptcd2	92	45.143	Rattus_norvegicus
ENSSMAG00000010350	ptcd2	90	40.058	ENSRBIG00000032929	PTCD2	89	40.058	Rhinopithecus_bieti
ENSSMAG00000010350	ptcd2	90	44.957	ENSRROG00000000080	PTCD2	91	44.957	Rhinopithecus_roxellana
ENSSMAG00000010350	ptcd2	90	42.363	ENSSBOG00000018911	PTCD2	91	42.363	Saimiri_boliviensis_boliviensis
ENSSMAG00000010350	ptcd2	99	41.878	ENSSHAG00000003833	PTCD2	99	41.878	Sarcophilus_harrisii
ENSSMAG00000010350	ptcd2	90	50.720	ENSSFOG00015015415	ptcd2	90	50.720	Scleropages_formosus
ENSSMAG00000010350	ptcd2	100	69.531	ENSSDUG00000008142	ptcd2	95	69.531	Seriola_dumerili
ENSSMAG00000010350	ptcd2	100	69.271	ENSSLDG00000015284	ptcd2	100	69.271	Seriola_lalandi_dorsalis
ENSSMAG00000010350	ptcd2	71	41.758	ENSSARG00000004983	PTCD2	87	41.758	Sorex_araneus
ENSSMAG00000010350	ptcd2	96	40.849	ENSSPUG00000000176	PTCD2	95	40.849	Sphenodon_punctatus
ENSSMAG00000010350	ptcd2	100	61.458	ENSSPAG00000008591	ptcd2	98	61.458	Stegastes_partitus
ENSSMAG00000010350	ptcd2	90	44.669	ENSSSCG00000016975	PTCD2	82	44.669	Sus_scrofa
ENSSMAG00000010350	ptcd2	90	43.768	ENSTGUG00000005705	PTCD2	99	43.768	Taeniopygia_guttata
ENSSMAG00000010350	ptcd2	90	40.922	ENSTBEG00000016559	PTCD2	89	40.922	Tupaia_belangeri
ENSSMAG00000010350	ptcd2	94	42.857	ENSTTRG00000011851	PTCD2	94	43.836	Tursiops_truncatus
ENSSMAG00000010350	ptcd2	90	44.669	ENSUAMG00000007583	PTCD2	81	44.669	Ursus_americanus
ENSSMAG00000010350	ptcd2	96	42.973	ENSUMAG00000007666	PTCD2	97	42.973	Ursus_maritimus
ENSSMAG00000010350	ptcd2	90	42.939	ENSVPAG00000009597	PTCD2	89	42.939	Vicugna_pacos
ENSSMAG00000010350	ptcd2	90	45.533	ENSVVUG00000007299	-	97	41.176	Vulpes_vulpes
ENSSMAG00000010350	ptcd2	90	45.115	ENSXETG00000031652	PTCD2	91	45.115	Xenopus_tropicalis
ENSSMAG00000010350	ptcd2	98	62.533	ENSXMAG00000005940	ptcd2	89	62.730	Xiphophorus_maculatus