EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSSMAG00000010422 (Gene tree)
Gene ID: -
Gene Symbol: tnpo3
Alias: zgc:55409
Full Name: transportin 3
Gene Type: protein_coding
Species: Scophthalmus_maximus
Status: putative
Strand: Plus strand
Length: 9003 bases
Position: chr2:23493546-23502548
Accession: ZDB-GENE-040426-708
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSMAP00000017020	Xpo1	PF08389.12	1.9e-26	1	1
ENSSMAP00000017020	IBN_N	PF03810.19	0.00011	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSMAT00000017230	-	2954	-	ENSSMAP00000017020	951 (aa)	-	-

Gene Model

Click here to download ENSSMAG00000010422's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSMAG00000010422's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSMAG00000010422	tnpo3	97	86.241	ENSG00000064419	TNPO3	100	86.241	Homo_sapiens
ENSSMAG00000010422	tnpo3	97	97.291	ENSAPOG00000018347	tnpo3	100	97.291	Acanthochromis_polyacanthus
ENSSMAG00000010422	tnpo3	97	83.088	ENSAMEG00000005135	TNPO3	98	83.088	Ailuropoda_melanoleuca
ENSSMAG00000010422	tnpo3	93	94.224	ENSACIG00000005897	tnpo3	99	94.224	Amphilophus_citrinellus
ENSSMAG00000010422	tnpo3	97	97.400	ENSAOCG00000008264	tnpo3	100	97.400	Amphiprion_ocellaris
ENSSMAG00000010422	tnpo3	93	97.508	ENSAPEG00000024300	tnpo3	100	97.508	Amphiprion_percula
ENSSMAG00000010422	tnpo3	97	96.641	ENSATEG00000003197	tnpo3	100	96.641	Anabas_testudineus
ENSSMAG00000010422	tnpo3	69	82.787	ENSAPLG00000005946	TNPO3	91	82.787	Anas_platyrhynchos
ENSSMAG00000010422	tnpo3	80	85.526	ENSACAG00000013470	TNPO3	94	85.942	Anolis_carolinensis
ENSSMAG00000010422	tnpo3	97	86.241	ENSANAG00000037940	TNPO3	100	86.241	Aotus_nancymaae
ENSSMAG00000010422	tnpo3	97	95.991	ENSACLG00000005561	tnpo3	100	95.991	Astatotilapia_calliptera
ENSSMAG00000010422	tnpo3	97	92.524	ENSAMXG00000016236	tnpo3	100	92.524	Astyanax_mexicanus
ENSSMAG00000010422	tnpo3	97	86.566	ENSBTAG00000004992	TNPO3	100	86.581	Bos_taurus
ENSSMAG00000010422	tnpo3	97	86.349	ENSCJAG00000018085	TNPO3	100	86.349	Callithrix_jacchus
ENSSMAG00000010422	tnpo3	97	86.241	ENSCAFG00000001543	TNPO3	100	86.241	Canis_familiaris
ENSSMAG00000010422	tnpo3	97	86.241	ENSCAFG00020022462	TNPO3	99	85.838	Canis_lupus_dingo
ENSSMAG00000010422	tnpo3	97	86.457	ENSCHIG00000011721	TNPO3	100	86.457	Capra_hircus
ENSSMAG00000010422	tnpo3	97	86.349	ENSTSYG00000002989	TNPO3	100	86.349	Carlito_syrichta
ENSSMAG00000010422	tnpo3	70	86.022	ENSCAPG00000005843	TNPO3	91	86.022	Cavia_aperea
ENSSMAG00000010422	tnpo3	97	86.132	ENSCPOG00000039784	TNPO3	100	86.132	Cavia_porcellus
ENSSMAG00000010422	tnpo3	97	86.349	ENSCCAG00000033826	TNPO3	100	86.349	Cebus_capucinus
ENSSMAG00000010422	tnpo3	97	86.241	ENSCATG00000030018	TNPO3	100	86.241	Cercocebus_atys
ENSSMAG00000010422	tnpo3	97	85.329	ENSCLAG00000016298	TNPO3	100	85.329	Chinchilla_lanigera
ENSSMAG00000010422	tnpo3	97	86.349	ENSCSAG00000009966	TNPO3	100	86.349	Chlorocebus_sabaeus
ENSSMAG00000010422	tnpo3	97	61.514	ENSCHOG00000011547	TNPO3	99	61.514	Choloepus_hoffmanni
ENSSMAG00000010422	tnpo3	90	85.064	ENSCPBG00000017497	TNPO3	100	85.064	Chrysemys_picta_bellii
ENSSMAG00000010422	tnpo3	96	48.807	ENSCING00000005042	-	99	48.807	Ciona_intestinalis
ENSSMAG00000010422	tnpo3	96	47.991	ENSCSAVG00000008623	-	96	55.197	Ciona_savignyi
ENSSMAG00000010422	tnpo3	97	86.241	ENSCANG00000033070	TNPO3	100	86.241	Colobus_angolensis_palliatus
ENSSMAG00000010422	tnpo3	97	86.241	ENSCGRG00001015925	Tnpo3	100	86.241	Cricetulus_griseus_chok1gshd
ENSSMAG00000010422	tnpo3	97	86.241	ENSCGRG00000010379	Tnpo3	100	86.241	Cricetulus_griseus_crigri
ENSSMAG00000010422	tnpo3	97	95.016	ENSCSEG00000005952	tnpo3	100	95.016	Cynoglossus_semilaevis
ENSSMAG00000010422	tnpo3	97	94.691	ENSCVAG00000020285	tnpo3	100	94.691	Cyprinodon_variegatus
ENSSMAG00000010422	tnpo3	97	91.766	ENSDARG00000045680	tnpo3	100	91.766	Danio_rerio
ENSSMAG00000010422	tnpo3	97	86.132	ENSDNOG00000002556	TNPO3	100	86.132	Dasypus_novemcinctus
ENSSMAG00000010422	tnpo3	60	85.320	ENSDORG00000002433	Tnpo3	95	85.320	Dipodomys_ordii
ENSSMAG00000010422	tnpo3	96	43.272	FBgn0031456	Tnpo-SR	99	43.272	Drosophila_melanogaster
ENSSMAG00000010422	tnpo3	92	86.374	ENSETEG00000002101	TNPO3	90	86.374	Echinops_telfairi
ENSSMAG00000010422	tnpo3	97	71.304	ENSEBUG00000016931	tnpo3	99	71.304	Eptatretus_burgeri
ENSSMAG00000010422	tnpo3	97	86.132	ENSEASG00005008677	TNPO3	100	86.132	Equus_asinus_asinus
ENSSMAG00000010422	tnpo3	97	86.132	ENSECAG00000012815	TNPO3	100	86.132	Equus_caballus
ENSSMAG00000010422	tnpo3	97	80.957	ENSEEUG00000005178	TNPO3	98	80.957	Erinaceus_europaeus
ENSSMAG00000010422	tnpo3	58	31.754	ENSEEUG00000011681	IPO13	72	31.754	Erinaceus_europaeus
ENSSMAG00000010422	tnpo3	97	94.886	ENSELUG00000012153	tnpo3	99	94.886	Esox_lucius
ENSSMAG00000010422	tnpo3	97	86.241	ENSFCAG00000018186	TNPO3	100	86.241	Felis_catus
ENSSMAG00000010422	tnpo3	93	81.382	ENSFALG00000010667	TNPO3	100	81.382	Ficedula_albicollis
ENSSMAG00000010422	tnpo3	97	86.054	ENSFDAG00000019578	TNPO3	100	86.054	Fukomys_damarensis
ENSSMAG00000010422	tnpo3	97	94.239	ENSFHEG00000012859	tnpo3	99	94.239	Fundulus_heteroclitus
ENSSMAG00000010422	tnpo3	97	93.824	ENSGMOG00000007324	tnpo3	100	93.824	Gadus_morhua
ENSSMAG00000010422	tnpo3	59	84.629	ENSGALG00000039420	TNPO3	99	84.629	Gallus_gallus
ENSSMAG00000010422	tnpo3	97	96.533	ENSGACG00000000699	tnpo3	100	96.533	Gasterosteus_aculeatus
ENSSMAG00000010422	tnpo3	90	84.947	ENSGAGG00000006777	TNPO3	100	84.947	Gopherus_agassizii
ENSSMAG00000010422	tnpo3	97	86.241	ENSGGOG00000008339	TNPO3	100	86.241	Gorilla_gorilla
ENSSMAG00000010422	tnpo3	97	95.991	ENSHBUG00000008351	tnpo3	100	95.991	Haplochromis_burtoni
ENSSMAG00000010422	tnpo3	97	86.349	ENSHGLG00000004463	TNPO3	100	86.349	Heterocephalus_glaber_female
ENSSMAG00000010422	tnpo3	97	86.349	ENSHGLG00100005509	TNPO3	100	86.349	Heterocephalus_glaber_male
ENSSMAG00000010422	tnpo3	97	92.308	ENSHCOG00000007221	tnpo3	100	92.308	Hippocampus_comes
ENSSMAG00000010422	tnpo3	97	90.693	ENSIPUG00000014979	TNPO3	100	90.693	Ictalurus_punctatus
ENSSMAG00000010422	tnpo3	97	86.132	ENSSTOG00000004885	TNPO3	100	86.132	Ictidomys_tridecemlineatus
ENSSMAG00000010422	tnpo3	97	80.000	ENSJJAG00000013530	Tnpo3	100	80.000	Jaculus_jaculus
ENSSMAG00000010422	tnpo3	97	94.691	ENSKMAG00000010497	tnpo3	100	94.691	Kryptolebias_marmoratus
ENSSMAG00000010422	tnpo3	93	92.412	ENSLBEG00000011988	-	99	92.412	Labrus_bergylta
ENSSMAG00000010422	tnpo3	93	94.564	ENSLBEG00000016595	tnpo3	100	94.564	Labrus_bergylta
ENSSMAG00000010422	tnpo3	81	87.201	ENSLACG00000002351	TNPO3	100	87.201	Latimeria_chalumnae
ENSSMAG00000010422	tnpo3	97	92.091	ENSLOCG00000015556	tnpo3	100	92.091	Lepisosteus_oculatus
ENSSMAG00000010422	tnpo3	97	85.545	ENSLAFG00000002738	TNPO3	100	85.545	Loxodonta_africana
ENSSMAG00000010422	tnpo3	97	86.241	ENSMFAG00000032385	TNPO3	100	86.241	Macaca_fascicularis
ENSSMAG00000010422	tnpo3	97	86.241	ENSMMUG00000004311	TNPO3	100	86.241	Macaca_mulatta
ENSSMAG00000010422	tnpo3	97	86.241	ENSMNEG00000045277	TNPO3	100	86.241	Macaca_nemestrina
ENSSMAG00000010422	tnpo3	97	86.241	ENSMLEG00000037881	TNPO3	100	86.241	Mandrillus_leucophaeus
ENSSMAG00000010422	tnpo3	97	97.183	ENSMAMG00000021096	tnpo3	100	97.183	Mastacembelus_armatus
ENSSMAG00000010422	tnpo3	97	95.991	ENSMZEG00005015084	tnpo3	100	95.991	Maylandia_zebra
ENSSMAG00000010422	tnpo3	76	81.103	ENSMGAG00000002839	TNPO3	99	81.103	Meleagris_gallopavo
ENSSMAG00000010422	tnpo3	97	86.132	ENSMAUG00000013463	Tnpo3	100	86.132	Mesocricetus_auratus
ENSSMAG00000010422	tnpo3	68	33.077	ENSMICG00000011003	IPO13	81	33.136	Microcebus_murinus
ENSSMAG00000010422	tnpo3	97	86.241	ENSMICG00000000140	TNPO3	100	86.241	Microcebus_murinus
ENSSMAG00000010422	tnpo3	97	86.241	ENSMOCG00000013264	Tnpo3	100	86.241	Microtus_ochrogaster
ENSSMAG00000010422	tnpo3	97	95.775	ENSMMOG00000005887	tnpo3	100	95.775	Mola_mola
ENSSMAG00000010422	tnpo3	97	86.674	ENSMODG00000014700	TNPO3	100	86.674	Monodelphis_domestica
ENSSMAG00000010422	tnpo3	97	95.991	ENSMALG00000006675	tnpo3	100	95.991	Monopterus_albus
ENSSMAG00000010422	tnpo3	97	86.024	MGP_CAROLIEiJ_G0028176	Tnpo3	100	86.024	Mus_caroli
ENSSMAG00000010422	tnpo3	97	86.024	ENSMUSG00000012535	Tnpo3	100	86.024	Mus_musculus
ENSSMAG00000010422	tnpo3	97	86.024	MGP_PahariEiJ_G0021934	Tnpo3	100	86.024	Mus_pahari
ENSSMAG00000010422	tnpo3	97	85.915	MGP_SPRETEiJ_G0029176	Tnpo3	100	85.915	Mus_spretus
ENSSMAG00000010422	tnpo3	97	86.241	ENSMPUG00000006021	TNPO3	100	86.241	Mustela_putorius_furo
ENSSMAG00000010422	tnpo3	97	77.465	ENSMLUG00000000947	TNPO3	100	77.465	Myotis_lucifugus
ENSSMAG00000010422	tnpo3	97	86.132	ENSNGAG00000008722	Tnpo3	100	86.132	Nannospalax_galili
ENSSMAG00000010422	tnpo3	97	94.366	ENSNBRG00000019001	tnpo3	100	95.829	Neolamprologus_brichardi
ENSSMAG00000010422	tnpo3	97	83.072	ENSNLEG00000012491	TNPO3	100	86.083	Nomascus_leucogenys
ENSSMAG00000010422	tnpo3	97	66.387	ENSMEUG00000002445	TNPO3	98	66.387	Notamacropus_eugenii
ENSSMAG00000010422	tnpo3	88	85.326	ENSOPRG00000006163	TNPO3	90	85.326	Ochotona_princeps
ENSSMAG00000010422	tnpo3	95	86.142	ENSODEG00000012826	TNPO3	100	86.142	Octodon_degus
ENSSMAG00000010422	tnpo3	97	96.316	ENSONIG00000007604	tnpo3	100	96.316	Oreochromis_niloticus
ENSSMAG00000010422	tnpo3	93	82.953	ENSOANG00000011451	TNPO3	100	82.953	Ornithorhynchus_anatinus
ENSSMAG00000010422	tnpo3	97	83.088	ENSOCUG00000010105	TNPO3	99	83.088	Oryctolagus_cuniculus
ENSSMAG00000010422	tnpo3	97	94.691	ENSORLG00000029369	tnpo3	100	94.691	Oryzias_latipes
ENSSMAG00000010422	tnpo3	97	94.691	ENSORLG00020003464	tnpo3	100	94.691	Oryzias_latipes_hni
ENSSMAG00000010422	tnpo3	97	94.800	ENSORLG00015002610	tnpo3	100	94.800	Oryzias_latipes_hsok
ENSSMAG00000010422	tnpo3	97	94.800	ENSOMEG00000021006	tnpo3	100	94.800	Oryzias_melastigma
ENSSMAG00000010422	tnpo3	97	86.132	ENSOGAG00000015340	TNPO3	100	86.132	Otolemur_garnettii
ENSSMAG00000010422	tnpo3	97	86.457	ENSOARG00000004026	TNPO3	100	86.457	Ovis_aries
ENSSMAG00000010422	tnpo3	97	86.241	ENSPPAG00000034975	TNPO3	100	86.241	Pan_paniscus
ENSSMAG00000010422	tnpo3	97	86.241	ENSPPRG00000002050	TNPO3	100	86.241	Panthera_pardus
ENSSMAG00000010422	tnpo3	97	86.241	ENSPTIG00000016167	TNPO3	100	86.241	Panthera_tigris_altaica
ENSSMAG00000010422	tnpo3	97	86.241	ENSPTRG00000019676	TNPO3	100	86.241	Pan_troglodytes
ENSSMAG00000010422	tnpo3	95	86.077	ENSPANG00000022226	TNPO3	100	86.083	Papio_anubis
ENSSMAG00000010422	tnpo3	97	89.599	ENSPKIG00000023234	tnpo3	100	89.599	Paramormyrops_kingsleyae
ENSSMAG00000010422	tnpo3	97	85.313	ENSPKIG00000008628	-	100	85.313	Paramormyrops_kingsleyae
ENSSMAG00000010422	tnpo3	60	88.380	ENSPMGG00000009763	tnpo3	99	88.380	Periophthalmus_magnuspinnatus
ENSSMAG00000010422	tnpo3	97	86.132	ENSPEMG00000000422	Tnpo3	100	86.132	Peromyscus_maniculatus_bairdii
ENSSMAG00000010422	tnpo3	93	73.046	ENSPMAG00000008621	tnpo3	100	73.046	Petromyzon_marinus
ENSSMAG00000010422	tnpo3	97	86.241	ENSPCIG00000011366	TNPO3	100	86.241	Phascolarctos_cinereus
ENSSMAG00000010422	tnpo3	97	93.608	ENSPFOG00000013592	tnpo3	99	93.608	Poecilia_formosa
ENSSMAG00000010422	tnpo3	97	93.608	ENSPLAG00000010188	tnpo3	100	93.608	Poecilia_latipinna
ENSSMAG00000010422	tnpo3	97	93.716	ENSPMEG00000022731	tnpo3	100	93.716	Poecilia_mexicana
ENSSMAG00000010422	tnpo3	97	86.241	ENSPPYG00000017990	TNPO3	100	86.241	Pongo_abelii
ENSSMAG00000010422	tnpo3	97	77.020	ENSPCAG00000010158	TNPO3	98	77.020	Procavia_capensis
ENSSMAG00000010422	tnpo3	84	86.842	ENSPCOG00000023901	TNPO3	96	86.842	Propithecus_coquereli
ENSSMAG00000010422	tnpo3	97	80.357	ENSPVAG00000015757	TNPO3	98	80.357	Pteropus_vampyrus
ENSSMAG00000010422	tnpo3	97	95.991	ENSPNYG00000002349	tnpo3	100	95.991	Pundamilia_nyererei
ENSSMAG00000010422	tnpo3	97	93.608	ENSPNAG00000001142	tnpo3	100	93.608	Pygocentrus_nattereri
ENSSMAG00000010422	tnpo3	97	86.132	ENSRNOG00000021758	Tnpo3	100	86.132	Rattus_norvegicus
ENSSMAG00000010422	tnpo3	97	86.132	ENSRBIG00000042549	TNPO3	100	86.132	Rhinopithecus_bieti
ENSSMAG00000010422	tnpo3	97	86.132	ENSRROG00000039264	TNPO3	100	86.132	Rhinopithecus_roxellana
ENSSMAG00000010422	tnpo3	91	78.131	ENSSBOG00000029642	TNPO3	100	78.131	Saimiri_boliviensis_boliviensis
ENSSMAG00000010422	tnpo3	93	86.750	ENSSHAG00000006837	TNPO3	100	86.750	Sarcophilus_harrisii
ENSSMAG00000010422	tnpo3	97	85.577	ENSSFOG00015004256	tnpo3	100	85.577	Scleropages_formosus
ENSSMAG00000010422	tnpo3	97	90.358	ENSSFOG00015001474	tnpo3	100	90.358	Scleropages_formosus
ENSSMAG00000010422	tnpo3	97	98.375	ENSSDUG00000004850	tnpo3	100	98.375	Seriola_dumerili
ENSSMAG00000010422	tnpo3	97	98.375	ENSSLDG00000016927	tnpo3	100	98.375	Seriola_lalandi_dorsalis
ENSSMAG00000010422	tnpo3	92	74.587	ENSSARG00000013893	TNPO3	98	74.587	Sorex_araneus
ENSSMAG00000010422	tnpo3	97	80.911	ENSSPUG00000007457	TNPO3	99	80.952	Sphenodon_punctatus
ENSSMAG00000010422	tnpo3	76	97.521	ENSSPAG00000014209	tnpo3	99	97.521	Stegastes_partitus
ENSSMAG00000010422	tnpo3	97	86.241	ENSSSCG00000016572	TNPO3	100	86.241	Sus_scrofa
ENSSMAG00000010422	tnpo3	97	94.060	ENSTNIG00000003347	tnpo3	100	94.060	Tetraodon_nigroviridis
ENSSMAG00000010422	tnpo3	85	85.437	ENSTBEG00000007220	TNPO3	90	85.437	Tupaia_belangeri
ENSSMAG00000010422	tnpo3	97	73.845	ENSTTRG00000014618	TNPO3	98	73.845	Tursiops_truncatus
ENSSMAG00000010422	tnpo3	97	86.241	ENSUAMG00000021281	TNPO3	100	86.241	Ursus_americanus
ENSSMAG00000010422	tnpo3	97	86.241	ENSUMAG00000006882	TNPO3	100	86.241	Ursus_maritimus
ENSSMAG00000010422	tnpo3	82	73.322	ENSVPAG00000006166	TNPO3	88	73.322	Vicugna_pacos
ENSSMAG00000010422	tnpo3	97	86.241	ENSVVUG00000011004	TNPO3	100	86.450	Vulpes_vulpes
ENSSMAG00000010422	tnpo3	97	77.356	ENSXETG00000015009	tnpo3	99	77.356	Xenopus_tropicalis
ENSSMAG00000010422	tnpo3	97	93.608	ENSXMAG00000013062	tnpo3	100	93.608	Xiphophorus_maculatus