EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSSMAG00000010467 (Gene tree)
Gene ID: -
Gene Symbol: POP1
Alias: -
Full Name: POP1 homolog%2C ribonuclease P/MRP subunit
Gene Type: protein_coding
Species: Scophthalmus_maximus
Status: putative
Strand: Plus strand
Length: 6785 bases
Position: chr1:29329947-29336731
Accession: 30129
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSMAP00000017152	POP1	PF06978.11	4e-35	1	2
ENSSMAP00000017152	POP1	PF06978.11	4e-35	2	2
ENSSMAP00000017152	POPLD	PF08170.12	8.9e-29	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSMAT00000017362	POP1-201	2739	-	ENSSMAP00000017152	912 (aa)	-	-

Gene Model

Click here to download ENSSMAG00000010467's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSMAG00000010467's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSMAG00000010467	POP1	99	48.835	ENSG00000104356	POP1	87	53.284	Homo_sapiens
ENSSMAG00000010467	POP1	100	74.213	ENSAPOG00000008198	pop1	100	74.213	Acanthochromis_polyacanthus
ENSSMAG00000010467	POP1	97	48.694	ENSAMEG00000000556	POP1	92	46.910	Ailuropoda_melanoleuca
ENSSMAG00000010467	POP1	100	72.871	ENSACIG00000004169	POP1	100	72.555	Amphilophus_citrinellus
ENSSMAG00000010467	POP1	100	75.025	ENSAOCG00000010991	pop1	100	75.127	Amphiprion_ocellaris
ENSSMAG00000010467	POP1	100	74.605	ENSAPEG00000007607	pop1	100	74.787	Amphiprion_percula
ENSSMAG00000010467	POP1	100	74.236	ENSATEG00000024814	POP1	100	74.566	Anabas_testudineus
ENSSMAG00000010467	POP1	97	48.580	ENSAPLG00000014418	POP1	91	53.438	Anas_platyrhynchos
ENSSMAG00000010467	POP1	95	48.291	ENSACAG00000016083	POP1	92	48.968	Anolis_carolinensis
ENSSMAG00000010467	POP1	87	52.147	ENSANAG00000026360	POP1	84	57.143	Aotus_nancymaae
ENSSMAG00000010467	POP1	100	71.733	ENSACLG00000010951	pop1	100	71.907	Astatotilapia_calliptera
ENSSMAG00000010467	POP1	100	57.455	ENSAMXG00000014483	POP1	100	57.299	Astyanax_mexicanus
ENSSMAG00000010467	POP1	99	48.610	ENSBTAG00000012596	POP1	86	53.625	Bos_taurus
ENSSMAG00000010467	POP1	85	31.984	WBGene00015486	C05D11.9	74	31.984	Caenorhabditis_elegans
ENSSMAG00000010467	POP1	97	48.438	ENSCJAG00000015567	POP1	85	53.918	Callithrix_jacchus
ENSSMAG00000010467	POP1	98	48.827	ENSCAFG00000000469	POP1	93	48.401	Canis_familiaris
ENSSMAG00000010467	POP1	98	48.137	ENSCAFG00020026765	POP1	85	52.752	Canis_lupus_dingo
ENSSMAG00000010467	POP1	94	54.148	ENSCHIG00000017066	POP1	86	53.544	Capra_hircus
ENSSMAG00000010467	POP1	98	47.942	ENSTSYG00000003097	POP1	86	53.120	Carlito_syrichta
ENSSMAG00000010467	POP1	98	46.289	ENSCAPG00000007251	POP1	86	50.303	Cavia_aperea
ENSSMAG00000010467	POP1	98	47.772	ENSCPOG00000002901	POP1	86	52.672	Cavia_porcellus
ENSSMAG00000010467	POP1	100	47.139	ENSCCAG00000018939	POP1	87	53.670	Cebus_capucinus
ENSSMAG00000010467	POP1	98	53.435	ENSCATG00000040916	POP1	86	52.824	Cercocebus_atys
ENSSMAG00000010467	POP1	97	47.418	ENSCLAG00000007208	POP1	82	52.508	Chinchilla_lanigera
ENSSMAG00000010467	POP1	96	54.531	ENSCSAG00000012340	POP1	92	55.096	Chlorocebus_sabaeus
ENSSMAG00000010467	POP1	98	45.605	ENSCHOG00000011432	POP1	89	49.770	Choloepus_hoffmanni
ENSSMAG00000010467	POP1	95	51.792	ENSCPBG00000006373	POP1	91	50.480	Chrysemys_picta_bellii
ENSSMAG00000010467	POP1	98	53.752	ENSCANG00000001647	POP1	86	53.139	Colobus_angolensis_palliatus
ENSSMAG00000010467	POP1	97	47.128	ENSCGRG00001017308	Pop1	85	50.940	Cricetulus_griseus_chok1gshd
ENSSMAG00000010467	POP1	100	42.986	ENSCGRG00000010824	Pop1	94	45.607	Cricetulus_griseus_crigri
ENSSMAG00000010467	POP1	100	70.719	ENSCSEG00000008737	POP1	100	70.081	Cynoglossus_semilaevis
ENSSMAG00000010467	POP1	100	68.168	ENSCVAG00000022248	pop1	100	67.828	Cyprinodon_variegatus
ENSSMAG00000010467	POP1	51	55.789	ENSDARG00000102087	pop1	98	55.579	Danio_rerio
ENSSMAG00000010467	POP1	98	45.582	ENSDNOG00000019974	POP1	93	45.070	Dasypus_novemcinctus
ENSSMAG00000010467	POP1	95	42.995	ENSDORG00000015384	Pop1	82	46.216	Dipodomys_ordii
ENSSMAG00000010467	POP1	84	48.387	ENSETEG00000007839	POP1	80	48.387	Echinops_telfairi
ENSSMAG00000010467	POP1	53	71.429	ENSEEUG00000003050	-	53	75.758	Erinaceus_europaeus
ENSSMAG00000010467	POP1	100	62.717	ENSELUG00000003526	pop1	100	62.743	Esox_lucius
ENSSMAG00000010467	POP1	98	48.351	ENSFCAG00000002168	POP1	86	53.272	Felis_catus
ENSSMAG00000010467	POP1	100	45.614	ENSFALG00000005711	POP1	92	48.252	Ficedula_albicollis
ENSSMAG00000010467	POP1	98	46.591	ENSFDAG00000017068	POP1	86	51.455	Fukomys_damarensis
ENSSMAG00000010467	POP1	100	69.302	ENSFHEG00000019518	pop1	100	68.480	Fundulus_heteroclitus
ENSSMAG00000010467	POP1	100	63.770	ENSGMOG00000000659	POP1	100	63.732	Gadus_morhua
ENSSMAG00000010467	POP1	100	68.615	ENSGAFG00000019770	POP1	100	68.000	Gambusia_affinis
ENSSMAG00000010467	POP1	100	65.143	ENSGACG00000003499	pop1	92	72.306	Gasterosteus_aculeatus
ENSSMAG00000010467	POP1	95	50.972	ENSGAGG00000011737	POP1	89	49.467	Gopherus_agassizii
ENSSMAG00000010467	POP1	99	48.629	ENSGGOG00000003176	POP1	87	53.582	Gorilla_gorilla
ENSSMAG00000010467	POP1	100	71.530	ENSHBUG00000021583	pop1	100	71.805	Haplochromis_burtoni
ENSSMAG00000010467	POP1	98	47.265	ENSHGLG00000006029	POP1	86	51.840	Heterocephalus_glaber_female
ENSSMAG00000010467	POP1	98	47.265	ENSHGLG00100016879	POP1	86	51.840	Heterocephalus_glaber_male
ENSSMAG00000010467	POP1	100	67.775	ENSHCOG00000013888	pop1	100	67.256	Hippocampus_comes
ENSSMAG00000010467	POP1	100	54.945	ENSIPUG00000018336	pop1	100	54.545	Ictalurus_punctatus
ENSSMAG00000010467	POP1	98	47.156	ENSSTOG00000011455	POP1	83	52.214	Ictidomys_tridecemlineatus
ENSSMAG00000010467	POP1	98	46.667	ENSJJAG00000013325	Pop1	93	45.503	Jaculus_jaculus
ENSSMAG00000010467	POP1	100	71.546	ENSKMAG00000001346	POP1	100	71.104	Kryptolebias_marmoratus
ENSSMAG00000010467	POP1	100	69.703	ENSLBEG00000024457	POP1	100	68.947	Labrus_bergylta
ENSSMAG00000010467	POP1	98	50.613	ENSLACG00000012498	POP1	99	50.766	Latimeria_chalumnae
ENSSMAG00000010467	POP1	100	54.118	ENSLOCG00000009817	POP1	100	54.216	Lepisosteus_oculatus
ENSSMAG00000010467	POP1	98	49.119	ENSLAFG00000010770	POP1	85	53.740	Loxodonta_africana
ENSSMAG00000010467	POP1	98	53.599	ENSMFAG00000000347	POP1	86	52.986	Macaca_fascicularis
ENSSMAG00000010467	POP1	98	53.599	ENSMNEG00000036870	POP1	86	52.986	Macaca_nemestrina
ENSSMAG00000010467	POP1	98	53.752	ENSMLEG00000034986	POP1	86	52.672	Mandrillus_leucophaeus
ENSSMAG00000010467	POP1	100	75.178	ENSMAMG00000004040	pop1	100	75.178	Mastacembelus_armatus
ENSSMAG00000010467	POP1	100	71.602	ENSMZEG00005025448	pop1	100	71.907	Maylandia_zebra
ENSSMAG00000010467	POP1	100	45.722	ENSMGAG00000012167	POP1	93	49.125	Meleagris_gallopavo
ENSSMAG00000010467	POP1	98	46.973	ENSMAUG00000017537	Pop1	87	51.227	Mesocricetus_auratus
ENSSMAG00000010467	POP1	97	48.290	ENSMICG00000004361	POP1	92	45.426	Microcebus_murinus
ENSSMAG00000010467	POP1	99	46.992	ENSMOCG00000006356	Pop1	93	46.162	Microtus_ochrogaster
ENSSMAG00000010467	POP1	100	70.999	ENSMMOG00000018242	pop1	100	70.690	Mola_mola
ENSSMAG00000010467	POP1	99	47.955	ENSMODG00000006561	POP1	85	53.485	Monodelphis_domestica
ENSSMAG00000010467	POP1	100	72.635	ENSMALG00000012621	POP1	100	72.533	Monopterus_albus
ENSSMAG00000010467	POP1	98	45.691	MGP_CAROLIEiJ_G0019726	Pop1	86	49.770	Mus_caroli
ENSSMAG00000010467	POP1	98	46.010	ENSMUSG00000022325	Pop1	86	50.076	Mus_musculus
ENSSMAG00000010467	POP1	98	46.138	MGP_PahariEiJ_G0019735	Pop1	86	49.923	Mus_pahari
ENSSMAG00000010467	POP1	98	46.362	MGP_SPRETEiJ_G0020622	Pop1	86	50.384	Mus_spretus
ENSSMAG00000010467	POP1	97	48.374	ENSMPUG00000015250	POP1	92	47.954	Mustela_putorius_furo
ENSSMAG00000010467	POP1	98	46.170	ENSMLUG00000010204	POP1	85	50.305	Myotis_lucifugus
ENSSMAG00000010467	POP1	98	47.150	ENSNGAG00000001582	Pop1	86	51.767	Nannospalax_galili
ENSSMAG00000010467	POP1	100	72.756	ENSNBRG00000002356	pop1	100	72.406	Neolamprologus_brichardi
ENSSMAG00000010467	POP1	98	49.175	ENSNLEG00000002541	POP1	86	54.058	Nomascus_leucogenys
ENSSMAG00000010467	POP1	93	55.337	ENSMEUG00000003118	POP1	90	46.434	Notamacropus_eugenii
ENSSMAG00000010467	POP1	98	48.179	ENSOPRG00000007667	POP1	86	52.446	Ochotona_princeps
ENSSMAG00000010467	POP1	98	47.777	ENSODEG00000003984	POP1	86	52.061	Octodon_degus
ENSSMAG00000010467	POP1	100	71.935	ENSONIG00000016445	pop1	100	72.110	Oreochromis_niloticus
ENSSMAG00000010467	POP1	54	63.333	ENSOANG00000001278	-	83	52.326	Ornithorhynchus_anatinus
ENSSMAG00000010467	POP1	98	51.994	ENSOCUG00000017400	POP1	85	52.446	Oryctolagus_cuniculus
ENSSMAG00000010467	POP1	100	70.466	ENSORLG00000002839	pop1	100	70.332	Oryzias_latipes
ENSSMAG00000010467	POP1	100	69.863	ENSORLG00020022450	POP1	100	69.506	Oryzias_latipes_hni
ENSSMAG00000010467	POP1	100	70.155	ENSORLG00015012746	POP1	100	70.259	Oryzias_latipes_hsok
ENSSMAG00000010467	POP1	100	68.634	ENSOMEG00000006915	pop1	99	68.944	Oryzias_melastigma
ENSSMAG00000010467	POP1	97	48.269	ENSOGAG00000001466	POP1	84	53.145	Otolemur_garnettii
ENSSMAG00000010467	POP1	99	48.936	ENSPPAG00000018410	POP1	87	53.433	Pan_paniscus
ENSSMAG00000010467	POP1	98	47.992	ENSPPRG00000005002	POP1	86	53.040	Panthera_pardus
ENSSMAG00000010467	POP1	98	48.198	ENSPTIG00000016527	POP1	86	53.040	Panthera_tigris_altaica
ENSSMAG00000010467	POP1	99	49.037	ENSPTRG00000020458	POP1	87	53.582	Pan_troglodytes
ENSSMAG00000010467	POP1	98	53.905	ENSPANG00000009704	POP1	86	53.292	Papio_anubis
ENSSMAG00000010467	POP1	100	58.729	ENSPKIG00000016325	POP1	100	58.907	Paramormyrops_kingsleyae
ENSSMAG00000010467	POP1	95	50.323	ENSPSIG00000012343	POP1	100	45.736	Pelodiscus_sinensis
ENSSMAG00000010467	POP1	100	64.153	ENSPMGG00000022253	POP1	100	63.880	Periophthalmus_magnuspinnatus
ENSSMAG00000010467	POP1	98	46.053	ENSPEMG00000023633	Pop1	93	45.547	Peromyscus_maniculatus_bairdii
ENSSMAG00000010467	POP1	95	42.630	ENSPMAG00000003209	POP1	99	42.402	Petromyzon_marinus
ENSSMAG00000010467	POP1	99	47.331	ENSPCIG00000012216	POP1	85	52.439	Phascolarctos_cinereus
ENSSMAG00000010467	POP1	100	67.963	ENSPFOG00000012490	POP1	100	67.656	Poecilia_formosa
ENSSMAG00000010467	POP1	100	68.033	ENSPLAG00000004646	POP1	100	67.725	Poecilia_latipinna
ENSSMAG00000010467	POP1	100	68.378	ENSPMEG00000019592	POP1	100	67.864	Poecilia_mexicana
ENSSMAG00000010467	POP1	100	68.270	ENSPREG00000020951	POP1	100	68.066	Poecilia_reticulata
ENSSMAG00000010467	POP1	99	48.328	ENSPPYG00000018777	POP1	87	53.433	Pongo_abelii
ENSSMAG00000010467	POP1	98	45.661	ENSPCAG00000016662	POP1	85	49.387	Procavia_capensis
ENSSMAG00000010467	POP1	98	45.594	ENSPCOG00000019420	POP1	86	52.439	Propithecus_coquereli
ENSSMAG00000010467	POP1	98	47.461	ENSPVAG00000014468	POP1	85	51.302	Pteropus_vampyrus
ENSSMAG00000010467	POP1	100	73.927	ENSPNYG00000004476	pop1	100	73.899	Pundamilia_nyererei
ENSSMAG00000010467	POP1	100	57.585	ENSPNAG00000000265	pop1	100	57.669	Pygocentrus_nattereri
ENSSMAG00000010467	POP1	98	45.697	ENSRNOG00000005243	Pop1	86	50.459	Rattus_norvegicus
ENSSMAG00000010467	POP1	98	54.058	ENSRBIG00000007996	POP1	86	53.446	Rhinopithecus_bieti
ENSSMAG00000010467	POP1	98	54.058	ENSRROG00000012334	POP1	86	53.446	Rhinopithecus_roxellana
ENSSMAG00000010467	POP1	98	47.893	ENSSBOG00000020830	POP1	87	52.761	Saimiri_boliviensis_boliviensis
ENSSMAG00000010467	POP1	98	48.240	ENSSHAG00000000296	POP1	85	53.752	Sarcophilus_harrisii
ENSSMAG00000010467	POP1	100	58.980	ENSSFOG00015007429	pop1	99	58.980	Scleropages_formosus
ENSSMAG00000010467	POP1	100	77.397	ENSSDUG00000007817	POP1	100	76.744	Seriola_dumerili
ENSSMAG00000010467	POP1	100	77.195	ENSSLDG00000012565	POP1	100	76.643	Seriola_lalandi_dorsalis
ENSSMAG00000010467	POP1	98	47.182	ENSSPUG00000003550	-	92	46.242	Sphenodon_punctatus
ENSSMAG00000010467	POP1	100	74.842	ENSSPAG00000014955	pop1	100	74.526	Stegastes_partitus
ENSSMAG00000010467	POP1	97	48.250	ENSSSCG00000006078	POP1	85	52.582	Sus_scrofa
ENSSMAG00000010467	POP1	97	43.836	ENSTGUG00000012011	-	92	46.025	Taeniopygia_guttata
ENSSMAG00000010467	POP1	100	70.042	ENSTRUG00000010856	pop1	100	69.716	Takifugu_rubripes
ENSSMAG00000010467	POP1	95	69.870	ENSTNIG00000013297	pop1	96	69.438	Tetraodon_nigroviridis
ENSSMAG00000010467	POP1	99	44.670	ENSTBEG00000014214	POP1	89	48.706	Tupaia_belangeri
ENSSMAG00000010467	POP1	99	46.660	ENSTTRG00000016071	POP1	86	50.604	Tursiops_truncatus
ENSSMAG00000010467	POP1	98	48.601	ENSUAMG00000017309	POP1	96	48.037	Ursus_americanus
ENSSMAG00000010467	POP1	88	59.195	ENSUMAG00000016952	POP1	91	56.897	Ursus_maritimus
ENSSMAG00000010467	POP1	84	55.446	ENSVPAG00000008278	POP1	75	56.000	Vicugna_pacos
ENSSMAG00000010467	POP1	98	47.925	ENSVVUG00000010994	POP1	85	52.599	Vulpes_vulpes
ENSSMAG00000010467	POP1	100	61.507	ENSXCOG00000017043	POP1	100	61.303	Xiphophorus_couchianus
ENSSMAG00000010467	POP1	100	68.270	ENSXMAG00000002472	POP1	100	67.554	Xiphophorus_maculatus