EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSSMAG00000010552 (Gene tree)
Gene ID: -
Gene Symbol: arl5c
Alias: zgc:77751
Full Name: ADP-ribosylation factor-like 5C
Gene Type: protein_coding
Species: Scophthalmus_maximus
Status: putative
Strand: Plus strand
Length: 6218 bases
Position: chr19:17420128-17426345
Accession: ZDB-GENE-040426-1866
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSMAP00000017253	MMR_HSR1	PF01926.23	1.5e-07	1	1
ENSSMAP00000017339	MMR_HSR1	PF01926.23	1.5e-07	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSMAT00000017465	-	2299	-	ENSSMAP00000017253	179 (aa)	-	-
ENSSMAT00000017551	-	2299	-	ENSSMAP00000017339	179 (aa)	-	-

Gene Model

Click here to download ENSSMAG00000010552's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSMAG00000010552's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSSMAG00000010552	arl5c	89	39.759	ENSSMAG00000013072	-	86	39.759
ENSSMAG00000010552	arl5c	98	44.633	ENSSMAG00000011361	arf5	98	45.783
ENSSMAG00000010552	arl5c	99	41.667	ENSSMAG00000017643	arl2	97	41.667
ENSSMAG00000010552	arl5c	58	32.075	ENSSMAG00000015130	arl8bb	66	32.075
ENSSMAG00000010552	arl5c	89	43.114	ENSSMAG00000016399	arl4cb	86	43.114
ENSSMAG00000010552	arl5c	85	42.500	ENSSMAG00000014218	-	80	41.975
ENSSMAG00000010552	arl5c	85	42.767	ENSSMAG00000017183	-	80	42.767
ENSSMAG00000010552	arl5c	98	46.328	ENSSMAG00000002927	-	98	46.328
ENSSMAG00000010552	arl5c	98	46.591	ENSSMAG00000006125	-	98	46.591
ENSSMAG00000010552	arl5c	99	35.238	ENSSMAG00000002487	-	99	35.238
ENSSMAG00000010552	arl5c	91	38.554	ENSSMAG00000021333	ARL6	90	38.554
ENSSMAG00000010552	arl5c	98	72.159	ENSSMAG00000006539	arl5a	98	72.159
ENSSMAG00000010552	arl5c	97	36.224	ENSSMAG00000007588	-	97	36.224
ENSSMAG00000010552	arl5c	83	44.966	ENSSMAG00000000005	arl11	86	44.966
ENSSMAG00000010552	arl5c	82	44.218	ENSSMAG00000006815	ARF6	97	44.218
ENSSMAG00000010552	arl5c	94	40.331	ENSSMAG00000001351	arfrp1	79	40.331
ENSSMAG00000010552	arl5c	98	46.328	ENSSMAG00000001861	arf3b	98	46.328
ENSSMAG00000010552	arl5c	96	39.306	ENSSMAG00000005803	arl3	95	39.306
ENSSMAG00000010552	arl5c	98	46.591	ENSSMAG00000018796	-	98	46.591
ENSSMAG00000010552	arl5c	92	37.195	ENSSMAG00000003002	arl3l2	83	37.195
ENSSMAG00000010552	arl5c	88	42.424	ENSSMAG00000012843	-	79	42.424
ENSSMAG00000010552	arl5c	87	31.646	ENSSMAG00000015087	arl8a	81	31.646
ENSSMAG00000010552	arl5c	98	46.328	ENSSMAG00000010770	arf2b	98	46.328
ENSSMAG00000010552	arl5c	100	42.778	ENSSMAG00000004541	-	100	42.778
ENSSMAG00000010552	arl5c	89	41.212	ENSSMAG00000015059	arl4aa	83	41.212
ENSSMAG00000010552	arl5c	74	30.714	ENSSMAG00000010140	rab22a	73	30.714
ENSSMAG00000010552	arl5c	96	44.444	ENSSMAG00000016416	arl1	94	44.444
ENSSMAG00000010552	arl5c	86	42.500	ENSSMAG00000008394	arl4d	80	42.500
ENSSMAG00000010552	arl5c	98	71.429	ENSSMAG00000011578	arl8	98	71.429

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSMAG00000010552	arl5c	100	89.944	ENSAPOG00000005821	arl5c	100	89.944	Acanthochromis_polyacanthus
ENSSMAG00000010552	arl5c	99	84.358	ENSACIG00000008975	arl5c	99	84.358	Amphilophus_citrinellus
ENSSMAG00000010552	arl5c	100	91.620	ENSAOCG00000010448	arl5c	100	91.620	Amphiprion_ocellaris
ENSSMAG00000010552	arl5c	100	91.620	ENSAPEG00000002699	arl5c	100	91.620	Amphiprion_percula
ENSSMAG00000010552	arl5c	100	87.151	ENSATEG00000000181	arl5c	100	87.151	Anabas_testudineus
ENSSMAG00000010552	arl5c	100	89.944	ENSACLG00000000922	arl5c	100	89.944	Astatotilapia_calliptera
ENSSMAG00000010552	arl5c	100	83.240	ENSAMXG00000031771	arl5c	100	83.240	Astyanax_mexicanus
ENSSMAG00000010552	arl5c	100	84.916	ENSCSEG00000009845	arl5c	100	84.916	Cynoglossus_semilaevis
ENSSMAG00000010552	arl5c	100	88.268	ENSCVAG00000012706	arl5c	100	88.268	Cyprinodon_variegatus
ENSSMAG00000010552	arl5c	100	82.682	ENSDARG00000035719	arl5c	100	82.682	Danio_rerio
ENSSMAG00000010552	arl5c	100	87.151	ENSELUG00000016864	arl5c	100	87.151	Esox_lucius
ENSSMAG00000010552	arl5c	100	88.268	ENSFHEG00000013677	arl5c	100	88.268	Fundulus_heteroclitus
ENSSMAG00000010552	arl5c	100	88.268	ENSGAFG00000002547	arl5c	100	88.268	Gambusia_affinis
ENSSMAG00000010552	arl5c	100	90.503	ENSGACG00000009321	arl5c	100	90.503	Gasterosteus_aculeatus
ENSSMAG00000010552	arl5c	100	89.944	ENSHBUG00000007301	arl5c	100	89.944	Haplochromis_burtoni
ENSSMAG00000010552	arl5c	100	84.916	ENSHCOG00000017576	-	100	84.916	Hippocampus_comes
ENSSMAG00000010552	arl5c	100	83.240	ENSIPUG00000023232	arl5c	100	83.240	Ictalurus_punctatus
ENSSMAG00000010552	arl5c	100	89.944	ENSKMAG00000011323	arl5c	100	89.944	Kryptolebias_marmoratus
ENSSMAG00000010552	arl5c	100	90.503	ENSLBEG00000006177	arl5c	86	90.503	Labrus_bergylta
ENSSMAG00000010552	arl5c	100	88.827	ENSMAMG00000022157	arl5c	100	88.827	Mastacembelus_armatus
ENSSMAG00000010552	arl5c	100	89.944	ENSMZEG00005022925	arl5c	100	89.944	Maylandia_zebra
ENSSMAG00000010552	arl5c	92	92.683	ENSMMOG00000020851	arl5c	96	92.683	Mola_mola
ENSSMAG00000010552	arl5c	92	87.805	ENSMALG00000009306	arl5c	93	87.805	Monopterus_albus
ENSSMAG00000010552	arl5c	100	90.503	ENSNBRG00000020245	arl5c	100	90.503	Neolamprologus_brichardi
ENSSMAG00000010552	arl5c	100	89.385	ENSONIG00000000890	arl5c	99	89.385	Oreochromis_niloticus
ENSSMAG00000010552	arl5c	100	85.475	ENSORLG00000002960	arl5c	100	86.585	Oryzias_latipes
ENSSMAG00000010552	arl5c	100	85.475	ENSORLG00020010074	arl5c	100	86.585	Oryzias_latipes_hni
ENSSMAG00000010552	arl5c	100	85.475	ENSORLG00015002752	arl5c	100	86.585	Oryzias_latipes_hsok
ENSSMAG00000010552	arl5c	97	84.971	ENSOMEG00000021718	arl5c	98	84.971	Oryzias_melastigma
ENSSMAG00000010552	arl5c	100	84.916	ENSPKIG00000021727	arl5c	100	84.916	Paramormyrops_kingsleyae
ENSSMAG00000010552	arl5c	100	88.827	ENSPFOG00000007842	arl5c	99	88.827	Poecilia_formosa
ENSSMAG00000010552	arl5c	100	88.268	ENSPLAG00000002394	arl5c	100	88.268	Poecilia_latipinna
ENSSMAG00000010552	arl5c	91	90.184	ENSPMEG00000000631	arl5c	94	90.184	Poecilia_mexicana
ENSSMAG00000010552	arl5c	100	89.385	ENSPREG00000008730	arl5c	100	89.385	Poecilia_reticulata
ENSSMAG00000010552	arl5c	100	89.944	ENSPNYG00000012720	arl5c	100	89.944	Pundamilia_nyererei
ENSSMAG00000010552	arl5c	100	81.564	ENSPNAG00000002310	arl5c	100	81.564	Pygocentrus_nattereri
ENSSMAG00000010552	arl5c	100	84.358	ENSSFOG00015023529	arl5c	100	84.358	Scleropages_formosus
ENSSMAG00000010552	arl5c	100	89.944	ENSSDUG00000022640	arl5c	100	89.944	Seriola_dumerili
ENSSMAG00000010552	arl5c	100	89.944	ENSSLDG00000000728	arl5c	100	89.944	Seriola_lalandi_dorsalis
ENSSMAG00000010552	arl5c	100	90.503	ENSSPAG00000007687	arl5c	100	90.503	Stegastes_partitus
ENSSMAG00000010552	arl5c	100	88.827	ENSTRUG00000022814	arl5c	100	88.827	Takifugu_rubripes
ENSSMAG00000010552	arl5c	100	88.827	ENSTNIG00000003015	arl5c	99	88.827	Tetraodon_nigroviridis
ENSSMAG00000010552	arl5c	100	87.709	ENSXCOG00000017380	arl5c	100	87.709	Xiphophorus_couchianus
ENSSMAG00000010552	arl5c	100	87.151	ENSXMAG00000008447	arl5c	100	87.151	Xiphophorus_maculatus