EuRBPDB

  • Home
  • Cancer
  • Family
  • Species
  • RBPredictor
  • Search
  • Download
  • Submit
  • Help
  • Contact

  • Description
  • RBDs
  • Transcripts
  • Gene Model
  • PPI
  • Paralogs
  • Orthologs
Description
Ensembl ID
ENSSMAG00000010803 (Gene tree)
Gene ID
-
Gene Symbol
pabpc1a
Alias
-
Full Name
poly(A) binding protein%2C cytoplasmic 1a
Gene Type
protein_coding
Species
Scophthalmus_maximus
Status
putative
Strand
Plus strand
Length
5801 bases
Position
chr1:29660278-29666078
Accession
ZDB-GENE-030131-3238
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
ENSSMAP00000017712PABPPF00658.186.9e-3211
ENSSMAP00000017682PABPPF00658.187.1e-3211
ENSSMAP00000017712RRM_5PF13893.61.1e-0711
ENSSMAP00000017682RRM_5PF13893.61.1e-0711
ENSSMAP00000017712RRM_1PF00076.221.6e-9114
ENSSMAP00000017712RRM_1PF00076.221.6e-9124
ENSSMAP00000017712RRM_1PF00076.221.6e-9134
ENSSMAP00000017712RRM_1PF00076.221.6e-9144
ENSSMAP00000017682RRM_1PF00076.221.9e-9114
ENSSMAP00000017682RRM_1PF00076.221.9e-9124
ENSSMAP00000017682RRM_1PF00076.221.9e-9134
ENSSMAP00000017682RRM_1PF00076.221.9e-9144
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
ENSSMAT00000017898-2333-ENSSMAP00000017682635 (aa)--
ENSSMAT00000017927-1887-ENSSMAP00000017712628 (aa)--
Gene Model
Click here to download ENSSMAG00000010803's gene model file
Protein-Protein Interaction (PPI)

Clik here to download ENSSMAG00000010803's network
Paralogs
Ensembl IDGene SymbolCoverageIdentiy ParalogGene SymbolCoverageIdentiy
ENSSMAG00000010803pabpc1a9974.843ENSSMAG00000009007pabpc49975.314
ENSSMAG00000010803pabpc1a5936.145ENSSMAG00000006881elavl48436.145
ENSSMAG00000010803pabpc1a5937.349ENSSMAG00000004671elavl37837.349
ENSSMAG00000010803pabpc1a6032.632ENSSMAG00000012152RBMS15432.632
ENSSMAG00000010803pabpc1a5832.967ENSSMAG00000014353-8832.967
ENSSMAG00000010803pabpc1a5730.328ENSSMAG00000011347tia1l9330.328
ENSSMAG00000010803pabpc1a10088.871ENSSMAG00000006869pabpc1b10088.871
ENSSMAG00000010803pabpc1a5634.884ENSSMAG00000008925-5934.884
ENSSMAG00000010803pabpc1a5937.349ENSSMAG00000010745ELAVL28537.349
ENSSMAG00000010803pabpc1a5836.000ENSSMAG00000011828rbm197236.000
ENSSMAG00000010803pabpc1a5931.818ENSSMAG00000021241ncl5031.548
ENSSMAG00000010803pabpc1a5830.035ENSSMAG00000012671tial18030.035
ENSSMAG00000010803pabpc1a6032.632ENSSMAG00000020065-5832.632
ENSSMAG00000010803pabpc1a9869.036ENSSMAG00000010516pabpc1l9885.294
ENSSMAG00000010803pabpc1a6039.759ENSSMAG00000011707celf5a7339.759
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
ENSSMAG00000010803pabpc1a5880.102ENSG00000186288PABPC1L2A9880.102Homo_sapiens
ENSSMAG00000010803pabpc1a5880.102ENSG00000184388PABPC1L2B9880.102Homo_sapiens
ENSSMAG00000010803pabpc1a10090.596ENSAPOG00000017776pabpc1b10090.596Acanthochromis_polyacanthus
ENSSMAG00000010803pabpc1a10098.268ENSAPOG00000015105pabpc1a10098.268Acanthochromis_polyacanthus
ENSSMAG00000010803pabpc1a5880.102ENSAMEG00000019441-9880.102Ailuropoda_melanoleuca
ENSSMAG00000010803pabpc1a10097.638ENSACIG00000004685pabpc1a10097.638Amphilophus_citrinellus
ENSSMAG00000010803pabpc1a10085.871ENSACIG00000018366pabpc1b10085.871Amphilophus_citrinellus
ENSSMAG00000010803pabpc1a10090.752ENSAOCG00000019839pabpc1b10090.752Amphiprion_ocellaris
ENSSMAG00000010803pabpc1a10098.268ENSAOCG00000011656pabpc1a10098.268Amphiprion_ocellaris
ENSSMAG00000010803pabpc1a10098.268ENSAPEG00000006963pabpc1a10098.268Amphiprion_percula
ENSSMAG00000010803pabpc1a10090.752ENSAPEG00000010435pabpc1b10090.752Amphiprion_percula
ENSSMAG00000010803pabpc1a10097.953ENSATEG00000024852pabpc1a10097.953Anabas_testudineus
ENSSMAG00000010803pabpc1a10089.202ENSATEG00000012917pabpc1b10089.515Anabas_testudineus
ENSSMAG00000010803pabpc1a5880.102ENSANAG00000019431-9880.102Aotus_nancymaae
ENSSMAG00000010803pabpc1a5880.102ENSANAG00000019429-9880.102Aotus_nancymaae
ENSSMAG00000010803pabpc1a10097.795ENSACLG00000009399pabpc1a10099.010Astatotilapia_calliptera
ENSSMAG00000010803pabpc1a10089.185ENSACLG00000014335pabpc1b10089.185Astatotilapia_calliptera
ENSSMAG00000010803pabpc1a10089.812ENSAMXG00000008599pabpc1b10089.812Astyanax_mexicanus
ENSSMAG00000010803pabpc1a6079.024ENSBTAG00000050902-9879.024Bos_taurus
ENSSMAG00000010803pabpc1a6077.033ENSBTAG00000052491-9877.033Bos_taurus
ENSSMAG00000010803pabpc1a5880.102ENSCJAG00000041326-9880.102Callithrix_jacchus
ENSSMAG00000010803pabpc1a6079.024ENSCAFG00020002052-9879.024Canis_lupus_dingo
ENSSMAG00000010803pabpc1a5880.102ENSCHIG00000006283-9880.102Capra_hircus
ENSSMAG00000010803pabpc1a5880.102ENSCHIG00000011138-9880.102Capra_hircus
ENSSMAG00000010803pabpc1a5880.102ENSTSYG00000001775-9880.102Carlito_syrichta
ENSSMAG00000010803pabpc1a5880.102ENSCPOG00000009525-9880.102Cavia_porcellus
ENSSMAG00000010803pabpc1a5880.102ENSCCAG00000031524-9880.102Cebus_capucinus
ENSSMAG00000010803pabpc1a5880.102ENSCATG00000042826-9880.102Cercocebus_atys
ENSSMAG00000010803pabpc1a5880.102ENSCATG00000043125-9880.102Cercocebus_atys
ENSSMAG00000010803pabpc1a5878.061ENSCLAG00000017412-9878.061Chinchilla_lanigera
ENSSMAG00000010803pabpc1a5878.061ENSCLAG00000017409-9878.061Chinchilla_lanigera
ENSSMAG00000010803pabpc1a5880.102ENSCSAG00000000102-9880.102Chlorocebus_sabaeus
ENSSMAG00000010803pabpc1a5879.670ENSCGRG00001023387-9677.436Cricetulus_griseus_chok1gshd
ENSSMAG00000010803pabpc1a10088.558ENSCSEG00000015241-10088.558Cynoglossus_semilaevis
ENSSMAG00000010803pabpc1a9997.468ENSCSEG00000013324pabpc1a10097.468Cynoglossus_semilaevis
ENSSMAG00000010803pabpc1a10088.263ENSCVAG00000005489pabpc1b10088.263Cyprinodon_variegatus
ENSSMAG00000010803pabpc1a10097.323ENSCVAG00000021872pabpc1a10097.323Cyprinodon_variegatus
ENSSMAG00000010803pabpc1a10091.536ENSDARG00000017219pabpc1a10091.536Danio_rerio
ENSSMAG00000010803pabpc1a10089.028ENSDARG00000021140pabpc1b9992.199Danio_rerio
ENSSMAG00000010803pabpc1a5880.423ENSDNOG00000030926-9878.571Dasypus_novemcinctus
ENSSMAG00000010803pabpc1a5877.551ENSDORG00000011362-9877.551Dipodomys_ordii
ENSSMAG00000010803pabpc1a6078.641ENSEASG00005010399-9878.641Equus_asinus_asinus
ENSSMAG00000010803pabpc1a6078.641ENSECAG00000002620-9878.641Equus_caballus
ENSSMAG00000010803pabpc1a6076.020ENSEEUG00000008203-9876.020Erinaceus_europaeus
ENSSMAG00000010803pabpc1a10088.281ENSELUG00000015062-10088.281Esox_lucius
ENSSMAG00000010803pabpc1a6058.621ENSELUG00000005389-9758.621Esox_lucius
ENSSMAG00000010803pabpc1a9994.025ENSELUG00000003614pabpc1a10094.025Esox_lucius
ENSSMAG00000010803pabpc1a5880.102ENSFCAG00000039701-9880.102Felis_catus
ENSSMAG00000010803pabpc1a5880.102ENSFDAG00000005484-9880.102Fukomys_damarensis
ENSSMAG00000010803pabpc1a10089.028ENSFHEG00000008186pabpc1b10089.342Fundulus_heteroclitus
ENSSMAG00000010803pabpc1a10097.323ENSFHEG00000018979pabpc1a10097.323Fundulus_heteroclitus
ENSSMAG00000010803pabpc1a9993.663ENSGMOG00000013448pabpc1a9993.972Gadus_morhua
ENSSMAG00000010803pabpc1a10081.395ENSGMOG00000002448-10081.395Gadus_morhua
ENSSMAG00000010803pabpc1a10089.969ENSGAFG00000010193pabpc1b10090.125Gambusia_affinis
ENSSMAG00000010803pabpc1a10097.008ENSGAFG00000019750pabpc1a10097.008Gambusia_affinis
ENSSMAG00000010803pabpc1a10088.199ENSGACG00000003771pabpc1b10088.372Gasterosteus_aculeatus
ENSSMAG00000010803pabpc1a10098.110ENSGACG00000003572pabpc1a10098.110Gasterosteus_aculeatus
ENSSMAG00000010803pabpc1a5880.102ENSGGOG00000038606-9880.102Gorilla_gorilla
ENSSMAG00000010803pabpc1a5880.102ENSGGOG00000043933-9880.102Gorilla_gorilla
ENSSMAG00000010803pabpc1a10089.185ENSHBUG00000002075pabpc1b10089.185Haplochromis_burtoni
ENSSMAG00000010803pabpc1a10097.795ENSHBUG00000020487pabpc1a10099.010Haplochromis_burtoni
ENSSMAG00000010803pabpc1a5879.082ENSHGLG00000019762-9879.082Heterocephalus_glaber_female
ENSSMAG00000010803pabpc1a5879.082ENSHGLG00000019668-9879.082Heterocephalus_glaber_female
ENSSMAG00000010803pabpc1a5879.082ENSHGLG00100020854-9879.082Heterocephalus_glaber_male
ENSSMAG00000010803pabpc1a9376.765ENSHCOG00000003175pabpc1b9976.765Hippocampus_comes
ENSSMAG00000010803pabpc1a10097.795ENSHCOG00000013502pabpc1a10097.795Hippocampus_comes
ENSSMAG00000010803pabpc1a7455.224ENSIPUG00000018724-7655.224Ictalurus_punctatus
ENSSMAG00000010803pabpc1a10089.764ENSIPUG00000008848pabpc1a10089.764Ictalurus_punctatus
ENSSMAG00000010803pabpc1a7554.262ENSIPUG00000021244-6752.569Ictalurus_punctatus
ENSSMAG00000010803pabpc1a10084.144ENSIPUG00000010791-10084.144Ictalurus_punctatus
ENSSMAG00000010803pabpc1a5879.592ENSSTOG00000026028-9879.592Ictidomys_tridecemlineatus
ENSSMAG00000010803pabpc1a5879.592ENSSTOG00000022096-9879.592Ictidomys_tridecemlineatus
ENSSMAG00000010803pabpc1a5878.571ENSJJAG00000007037-9878.571Jaculus_jaculus
ENSSMAG00000010803pabpc1a10088.522ENSKMAG00000008049pabpc1b10088.679Kryptolebias_marmoratus
ENSSMAG00000010803pabpc1a10097.638ENSKMAG00000000605pabpc1a10097.638Kryptolebias_marmoratus
ENSSMAG00000010803pabpc1a10097.953ENSLBEG00000024002-10097.953Labrus_bergylta
ENSSMAG00000010803pabpc1a10089.342ENSLBEG00000026845pabpc1b10089.342Labrus_bergylta
ENSSMAG00000010803pabpc1a5878.974ENSLAFG00000023096-9878.974Loxodonta_africana
ENSSMAG00000010803pabpc1a5879.695ENSMFAG00000028878-9879.695Macaca_fascicularis
ENSSMAG00000010803pabpc1a5880.102ENSMMUG00000039929-9880.102Macaca_mulatta
ENSSMAG00000010803pabpc1a5880.102ENSMMUG00000037681-9880.102Macaca_mulatta
ENSSMAG00000010803pabpc1a5880.102ENSMMUG00000009740-9880.102Macaca_mulatta
ENSSMAG00000010803pabpc1a5880.102ENSMNEG00000037732-9880.102Macaca_nemestrina
ENSSMAG00000010803pabpc1a5880.102ENSMLEG00000027495-9880.102Mandrillus_leucophaeus
ENSSMAG00000010803pabpc1a10097.953ENSMAMG00000004502-10098.558Mastacembelus_armatus
ENSSMAG00000010803pabpc1a10089.185ENSMAMG00000014610pabpc1b10089.185Mastacembelus_armatus
ENSSMAG00000010803pabpc1a10089.185ENSMZEG00005026745pabpc1b10089.185Maylandia_zebra
ENSSMAG00000010803pabpc1a10097.795ENSMZEG00005025416pabpc1a10099.010Maylandia_zebra
ENSSMAG00000010803pabpc1a5880.102ENSMICG00000047642-9880.102Microcebus_murinus
ENSSMAG00000010803pabpc1a10084.144ENSMMOG00000018009pabpc1b10084.144Mola_mola
ENSSMAG00000010803pabpc1a10095.312ENSMMOG00000018044pabpc1a10099.010Mola_mola
ENSSMAG00000010803pabpc1a9872.552ENSMODG00000013156-9872.843Monodelphis_domestica
ENSSMAG00000010803pabpc1a9965.728ENSMODG00000015024-9965.728Monodelphis_domestica
ENSSMAG00000010803pabpc1a10083.046ENSMALG00000006066pabpc1b10084.929Monopterus_albus
ENSSMAG00000010803pabpc1a10097.480ENSMALG00000013020-10097.480Monopterus_albus
ENSSMAG00000010803pabpc1a5881.967ENSNGAG00000012688-9878.571Nannospalax_galili
ENSSMAG00000010803pabpc1a10089.185ENSNBRG00000013737pabpc1b10089.185Neolamprologus_brichardi
ENSSMAG00000010803pabpc1a10097.638ENSNBRG00000003068-10099.010Neolamprologus_brichardi
ENSSMAG00000010803pabpc1a5880.102ENSNLEG00000018128-9880.102Nomascus_leucogenys
ENSSMAG00000010803pabpc1a5879.592ENSODEG00000018540-9879.592Octodon_degus
ENSSMAG00000010803pabpc1a10096.850ENSONIG00000006871-10096.850Oreochromis_niloticus
ENSSMAG00000010803pabpc1a10089.185ENSONIG00000002717pabpc1b10089.185Oreochromis_niloticus
ENSSMAG00000010803pabpc1a5880.102ENSOCUG00000002565-9880.102Oryctolagus_cuniculus
ENSSMAG00000010803pabpc1a10084.144ENSORLG00000003008-10084.144Oryzias_latipes
ENSSMAG00000010803pabpc1a9998.571ENSORLG00000002691pabpc1a10098.571Oryzias_latipes
ENSSMAG00000010803pabpc1a10084.144ENSORLG00020022259-10084.144Oryzias_latipes_hni
ENSSMAG00000010803pabpc1a10096.693ENSORLG00020022398pabpc1a10096.693Oryzias_latipes_hni
ENSSMAG00000010803pabpc1a10084.458ENSORLG00015010932-10084.458Oryzias_latipes_hsok
ENSSMAG00000010803pabpc1a10096.535ENSORLG00015013633pabpc110096.535Oryzias_latipes_hsok
ENSSMAG00000010803pabpc1a10097.323ENSOMEG00000020219pabpc1a10097.323Oryzias_melastigma
ENSSMAG00000010803pabpc1a9480.778ENSOMEG00000013627pabpc1b9986.139Oryzias_melastigma
ENSSMAG00000010803pabpc1a5880.102ENSOGAG00000029513-9880.102Otolemur_garnettii
ENSSMAG00000010803pabpc1a5880.102ENSOGAG00000026047-9880.102Otolemur_garnettii
ENSSMAG00000010803pabpc1a5880.102ENSOARG00000005943-9880.102Ovis_aries
ENSSMAG00000010803pabpc1a5880.102ENSPPAG00000012920-9880.102Pan_paniscus
ENSSMAG00000010803pabpc1a5880.102ENSPPRG00000011809-9880.102Panthera_pardus
ENSSMAG00000010803pabpc1a5880.102ENSPPRG00000011804-9880.102Panthera_pardus
ENSSMAG00000010803pabpc1a5880.102ENSPTRG00000028252-9880.102Pan_troglodytes
ENSSMAG00000010803pabpc1a5880.102ENSPANG00000011549-9880.102Papio_anubis
ENSSMAG00000010803pabpc1a10089.812ENSPKIG00000005676pabpc1b10089.812Paramormyrops_kingsleyae
ENSSMAG00000010803pabpc1a7191.928ENSPMGG00000023134-9791.928Periophthalmus_magnuspinnatus
ENSSMAG00000010803pabpc1a7495.238ENSPMGG00000022487pabpc1a9297.753Periophthalmus_magnuspinnatus
ENSSMAG00000010803pabpc1a9971.632ENSPCIG00000016995-5571.632Phascolarctos_cinereus
ENSSMAG00000010803pabpc1a10095.981ENSPFOG00000010815pabpc1a10095.981Poecilia_formosa
ENSSMAG00000010803pabpc1a10089.498ENSPFOG00000005917pabpc1b10089.655Poecilia_formosa
ENSSMAG00000010803pabpc1a10089.812ENSPLAG00000001388pabpc1b10089.969Poecilia_latipinna
ENSSMAG00000010803pabpc1a10097.953ENSPLAG00000004114pabpc1a10097.953Poecilia_latipinna
ENSSMAG00000010803pabpc1a10089.498ENSPMEG00000014399pabpc1b10089.655Poecilia_mexicana
ENSSMAG00000010803pabpc1a10097.953ENSPMEG00000001334pabpc1a10097.953Poecilia_mexicana
ENSSMAG00000010803pabpc1a10094.696ENSPREG00000019595pabpc1a100100.000Poecilia_reticulata
ENSSMAG00000010803pabpc1a10089.812ENSPREG00000010911pabpc1b10089.969Poecilia_reticulata
ENSSMAG00000010803pabpc1a5880.102ENSPPYG00000020468-9880.102Pongo_abelii
ENSSMAG00000010803pabpc1a6080.102ENSPCAG00000005308-9880.102Procavia_capensis
ENSSMAG00000010803pabpc1a5879.592ENSPCOG00000026349-9879.592Propithecus_coquereli
ENSSMAG00000010803pabpc1a6080.513ENSPVAG00000016117-9880.513Pteropus_vampyrus
ENSSMAG00000010803pabpc1a10097.795ENSPNYG00000005192pabpc1a10097.795Pundamilia_nyererei
ENSSMAG00000010803pabpc1a10089.185ENSPNYG00000012578pabpc1b10089.185Pundamilia_nyererei
ENSSMAG00000010803pabpc1a10089.185ENSPNAG00000024626pabpc1b10089.185Pygocentrus_nattereri
ENSSMAG00000010803pabpc1a10091.523ENSPNAG00000028408pabpc1a10091.523Pygocentrus_nattereri
ENSSMAG00000010803pabpc1a5880.102ENSRBIG00000027173-9880.102Rhinopithecus_bieti
ENSSMAG00000010803pabpc1a9188.967ENSRBIG00000028738-9589.573Rhinopithecus_bieti
ENSSMAG00000010803pabpc1a5880.102ENSRROG00000017404-9880.102Rhinopithecus_roxellana
ENSSMAG00000010803pabpc1a9863.462ENSSHAG00000000511-10063.462Sarcophilus_harrisii
ENSSMAG00000010803pabpc1a10089.639ENSSFOG00015006662pabpc1a10089.953Scleropages_formosus
ENSSMAG00000010803pabpc1a10089.953ENSSFOG00015002752-10089.953Scleropages_formosus
ENSSMAG00000010803pabpc1a7278.613ENSSFOG00015019668-10078.613Scleropages_formosus
ENSSMAG00000010803pabpc1a10097.953ENSSDUG00000006675pabpc1a10097.953Seriola_dumerili
ENSSMAG00000010803pabpc1a10087.774ENSSDUG00000011965pabpc1b10087.931Seriola_dumerili
ENSSMAG00000010803pabpc1a10097.953ENSSLDG00000011661pabpc1a10097.953Seriola_lalandi_dorsalis
ENSSMAG00000010803pabpc1a10089.425ENSSLDG00000014156pabpc1b10089.580Seriola_lalandi_dorsalis
ENSSMAG00000010803pabpc1a10090.439ENSSPAG00000019265pabpc1b10090.439Stegastes_partitus
ENSSMAG00000010803pabpc1a10098.268ENSSPAG00000014453-10098.268Stegastes_partitus
ENSSMAG00000010803pabpc1a5880.102ENSSSCG00000032167-9880.102Sus_scrofa
ENSSMAG00000010803pabpc1a5880.102ENSSSCG00000036336-9880.102Sus_scrofa
ENSSMAG00000010803pabpc1a10086.072ENSTRUG00000003767-10086.698Takifugu_rubripes
ENSSMAG00000010803pabpc1a10095.126ENSTRUG00000011577-10095.597Takifugu_rubripes
ENSSMAG00000010803pabpc1a10086.760ENSTNIG00000009153pabpc1b10086.760Tetraodon_nigroviridis
ENSSMAG00000010803pabpc1a10091.938ENSTNIG00000013307pabpc1a10092.403Tetraodon_nigroviridis
ENSSMAG00000010803pabpc1a5880.102ENSTTRG00000013181-9880.102Tursiops_truncatus
ENSSMAG00000010803pabpc1a5880.102ENSUAMG00000008089-9880.102Ursus_americanus
ENSSMAG00000010803pabpc1a9754.369ENSUMAG00000023926-8969.890Ursus_maritimus
ENSSMAG00000010803pabpc1a5880.102ENSUMAG00000003364-9880.102Ursus_maritimus
ENSSMAG00000010803pabpc1a5979.000ENSVVUG00000015892-9779.000Vulpes_vulpes
ENSSMAG00000010803pabpc1a9746.083ENSXETG00000015439-9746.083Xenopus_tropicalis
ENSSMAG00000010803pabpc1a10085.557ENSXCOG00000019901pabpc1b10085.557Xiphophorus_couchianus
ENSSMAG00000010803pabpc1a10091.785ENSXCOG00000017066pabpc1a10091.785Xiphophorus_couchianus
ENSSMAG00000010803pabpc1a10097.638ENSXMAG00000002555pabpc1a10097.638Xiphophorus_maculatus
ENSSMAG00000010803pabpc1a10089.969ENSXMAG00000003753pabpc1b10090.125Xiphophorus_maculatus

Copyright © , Bioinformatics Center, Sun Yat-sen Memorial Hospital, Sun Yat-sen University, China. All Rights Reserved.

Any comment and suggestion, please contact us