EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSSMAG00000010871 (Gene tree)
Gene ID: -
Gene Symbol: rbpms
Alias: si:cabz01079824.1
Full Name: RNA binding protein%2C mRNA processing factor
Gene Type: protein_coding
Species: Scophthalmus_maximus
Status: putative
Strand: Minus strand
Length: 31951 bases
Position: chr2:7650232-7682182
Accession: ZDB-GENE-161017-145
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSMAP00000017753	RRM_1	PF00076.22	3.2e-11	1	1
ENSSMAP00000017745	RRM_1	PF00076.22	3.2e-11	1	1
ENSSMAP00000017758	RRM_1	PF00076.22	5.4e-11	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSMAT00000017974	-	789	-	ENSSMAP00000017758	262 (aa)	-	-
ENSSMAT00000017961	-	594	-	ENSSMAP00000017745	197 (aa)	-	-
ENSSMAT00000017969	-	714	-	ENSSMAP00000017753	194 (aa)	-	A0A2U9B153

Gene Model

Click here to download ENSSMAG00000010871's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSMAG00000010871's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSSMAG00000010871	rbpms	91	71.196	ENSSMAG00000009743	rbpms2b	61	73.370

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSMAG00000010871	rbpms	99	84.536	ENSG00000157110	RBPMS	100	84.071	Homo_sapiens
ENSSMAG00000010871	rbpms	100	96.392	ENSAPOG00000022304	RBPMS	100	96.392	Acanthochromis_polyacanthus
ENSSMAG00000010871	rbpms	81	87.421	ENSAMEG00000001522	RBPMS	73	87.421	Ailuropoda_melanoleuca
ENSSMAG00000010871	rbpms	59	98.276	ENSACIG00000011395	RBPMS	63	97.436	Amphilophus_citrinellus
ENSSMAG00000010871	rbpms	100	96.392	ENSAOCG00000007731	RBPMS	100	96.392	Amphiprion_ocellaris
ENSSMAG00000010871	rbpms	100	96.392	ENSAPEG00000023543	RBPMS	100	96.392	Amphiprion_percula
ENSSMAG00000010871	rbpms	100	95.876	ENSATEG00000018184	RBPMS	100	95.876	Anabas_testudineus
ENSSMAG00000010871	rbpms	100	84.184	ENSACAG00000003012	RBPMS	100	82.653	Anolis_carolinensis
ENSSMAG00000010871	rbpms	99	84.536	ENSANAG00000028150	RBPMS	99	84.536	Aotus_nancymaae
ENSSMAG00000010871	rbpms	100	96.907	ENSACLG00000002926	RBPMS	100	96.907	Astatotilapia_calliptera
ENSSMAG00000010871	rbpms	99	91.146	ENSAMXG00000033491	rbpms	99	91.146	Astyanax_mexicanus
ENSSMAG00000010871	rbpms	99	84.536	ENSBTAG00000033727	RBPMS	80	85.143	Bos_taurus
ENSSMAG00000010871	rbpms	99	84.536	ENSCJAG00000012366	RBPMS	99	84.536	Callithrix_jacchus
ENSSMAG00000010871	rbpms	90	85.143	ENSCAFG00000006503	RBPMS	80	85.143	Canis_familiaris
ENSSMAG00000010871	rbpms	90	85.143	ENSCAFG00020001031	RBPMS	80	85.143	Canis_lupus_dingo
ENSSMAG00000010871	rbpms	99	78.462	ENSCHIG00000027156	RBPMS	99	78.462	Capra_hircus
ENSSMAG00000010871	rbpms	57	90.000	ENSTSYG00000013982	RBPMS	83	90.000	Carlito_syrichta
ENSSMAG00000010871	rbpms	99	85.052	ENSCPOG00000038597	RBPMS	99	85.052	Cavia_porcellus
ENSSMAG00000010871	rbpms	99	84.536	ENSCCAG00000033226	RBPMS	99	84.536	Cebus_capucinus
ENSSMAG00000010871	rbpms	99	84.536	ENSCATG00000036486	RBPMS	99	84.536	Cercocebus_atys
ENSSMAG00000010871	rbpms	89	87.931	ENSCLAG00000001518	RBPMS	100	87.931	Chinchilla_lanigera
ENSSMAG00000010871	rbpms	90	85.143	ENSCSAG00000015838	RBPMS	80	85.143	Chlorocebus_sabaeus
ENSSMAG00000010871	rbpms	79	89.032	ENSCHOG00000008745	RBPMS	79	89.032	Choloepus_hoffmanni
ENSSMAG00000010871	rbpms	100	82.564	ENSCPBG00000013437	RBPMS	100	82.564	Chrysemys_picta_bellii
ENSSMAG00000010871	rbpms	89	87.931	ENSCANG00000034997	RBPMS	100	87.931	Colobus_angolensis_palliatus
ENSSMAG00000010871	rbpms	100	79.695	ENSCGRG00001002814	Rbpms	100	83.756	Cricetulus_griseus_chok1gshd
ENSSMAG00000010871	rbpms	89	82.857	ENSCGRG00000006095	Rbpms	100	87.429	Cricetulus_griseus_crigri
ENSSMAG00000010871	rbpms	100	95.361	ENSCSEG00000002777	rbpms	99	96.685	Cynoglossus_semilaevis
ENSSMAG00000010871	rbpms	100	96.392	ENSCVAG00000013975	RBPMS	100	96.392	Cyprinodon_variegatus
ENSSMAG00000010871	rbpms	87	71.598	ENSDARG00000099396	rbpms	100	71.598	Danio_rerio
ENSSMAG00000010871	rbpms	90	84.000	ENSDNOG00000008126	RBPMS	80	84.000	Dasypus_novemcinctus
ENSSMAG00000010871	rbpms	90	85.714	ENSETEG00000017582	RBPMS	80	85.714	Echinops_telfairi
ENSSMAG00000010871	rbpms	79	89.032	ENSEASG00005016962	RBPMS	78	89.610	Equus_asinus_asinus
ENSSMAG00000010871	rbpms	90	85.143	ENSECAG00000020735	RBPMS	78	89.610	Equus_caballus
ENSSMAG00000010871	rbpms	100	92.268	ENSELUG00000009787	rbpms	100	92.268	Esox_lucius
ENSSMAG00000010871	rbpms	99	84.536	ENSFCAG00000025639	-	99	84.536	Felis_catus
ENSSMAG00000010871	rbpms	88	52.907	ENSFCAG00000022292	-	93	47.959	Felis_catus
ENSSMAG00000010871	rbpms	89	87.931	ENSFDAG00000012078	RBPMS	100	87.931	Fukomys_damarensis
ENSSMAG00000010871	rbpms	100	96.907	ENSFHEG00000000618	rbpms	100	96.907	Fundulus_heteroclitus
ENSSMAG00000010871	rbpms	77	60.000	ENSGMOG00000009646	-	100	60.000	Gadus_morhua
ENSSMAG00000010871	rbpms	100	96.392	ENSGAFG00000016566	RBPMS	100	96.392	Gambusia_affinis
ENSSMAG00000010871	rbpms	100	86.082	ENSGACG00000019471	rbpms	100	86.082	Gasterosteus_aculeatus
ENSSMAG00000010871	rbpms	60	85.345	ENSGAGG00000023634	RBPMS	54	83.065	Gopherus_agassizii
ENSSMAG00000010871	rbpms	100	96.907	ENSHBUG00000005888	RBPMS	100	96.907	Haplochromis_burtoni
ENSSMAG00000010871	rbpms	99	84.536	ENSHGLG00000002303	RBPMS	99	84.536	Heterocephalus_glaber_female
ENSSMAG00000010871	rbpms	89	87.931	ENSHGLG00100008787	RBPMS	100	87.931	Heterocephalus_glaber_male
ENSSMAG00000010871	rbpms	98	96.335	ENSHCOG00000005774	rbpms	99	96.335	Hippocampus_comes
ENSSMAG00000010871	rbpms	100	87.692	ENSIPUG00000012459	RBPMS	100	87.692	Ictalurus_punctatus
ENSSMAG00000010871	rbpms	99	84.536	ENSSTOG00000026546	RBPMS	99	84.536	Ictidomys_tridecemlineatus
ENSSMAG00000010871	rbpms	99	84.536	ENSJJAG00000014024	Rbpms	99	84.536	Jaculus_jaculus
ENSSMAG00000010871	rbpms	89	78.286	ENSKMAG00000006377	RBPMS	88	81.143	Kryptolebias_marmoratus
ENSSMAG00000010871	rbpms	100	95.876	ENSLBEG00000027989	RBPMS	97	99.422	Labrus_bergylta
ENSSMAG00000010871	rbpms	90	92.000	ENSLOCG00000013199	RBPMS	96	92.000	Lepisosteus_oculatus
ENSSMAG00000010871	rbpms	90	85.714	ENSLAFG00000000209	RBPMS	80	85.714	Loxodonta_africana
ENSSMAG00000010871	rbpms	99	84.536	ENSMFAG00000036911	RBPMS	99	84.536	Macaca_fascicularis
ENSSMAG00000010871	rbpms	99	84.536	ENSMMUG00000000458	RBPMS	99	84.536	Macaca_mulatta
ENSSMAG00000010871	rbpms	99	84.536	ENSMNEG00000043805	RBPMS	99	84.536	Macaca_nemestrina
ENSSMAG00000010871	rbpms	89	87.931	ENSMLEG00000015635	RBPMS	100	87.931	Mandrillus_leucophaeus
ENSSMAG00000010871	rbpms	100	71.649	ENSMAMG00000004604	RBPMS	94	74.054	Mastacembelus_armatus
ENSSMAG00000010871	rbpms	100	96.907	ENSMZEG00005000698	RBPMS	100	96.907	Maylandia_zebra
ENSSMAG00000010871	rbpms	90	85.143	ENSMGAG00000005088	RBPMS	90	85.143	Meleagris_gallopavo
ENSSMAG00000010871	rbpms	100	79.695	ENSMAUG00000018892	Rbpms	100	83.756	Mesocricetus_auratus
ENSSMAG00000010871	rbpms	99	79.897	ENSMICG00000001295	RBPMS	99	83.505	Microcebus_murinus
ENSSMAG00000010871	rbpms	100	79.695	ENSMOCG00000014009	Rbpms	100	83.756	Microtus_ochrogaster
ENSSMAG00000010871	rbpms	82	95.597	ENSMMOG00000012036	RBPMS	71	97.024	Mola_mola
ENSSMAG00000010871	rbpms	97	84.656	ENSMODG00000019006	RBPMS	89	84.656	Monodelphis_domestica
ENSSMAG00000010871	rbpms	100	93.814	ENSMALG00000003261	RBPMS	100	93.814	Monopterus_albus
ENSSMAG00000010871	rbpms	100	79.188	MGP_CAROLIEiJ_G0030970	Rbpms	100	83.249	Mus_caroli
ENSSMAG00000010871	rbpms	100	79.188	ENSMUSG00000031586	Rbpms	100	83.249	Mus_musculus
ENSSMAG00000010871	rbpms	100	79.695	MGP_PahariEiJ_G0021439	Rbpms	100	83.756	Mus_pahari
ENSSMAG00000010871	rbpms	100	79.188	MGP_SPRETEiJ_G0032087	Rbpms	100	83.249	Mus_spretus
ENSSMAG00000010871	rbpms	81	87.421	ENSMPUG00000011314	RBPMS	73	87.421	Mustela_putorius_furo
ENSSMAG00000010871	rbpms	99	84.021	ENSMLUG00000009391	RBPMS	99	85.256	Myotis_lucifugus
ENSSMAG00000010871	rbpms	90	85.143	ENSNGAG00000011141	Rbpms	80	85.143	Nannospalax_galili
ENSSMAG00000010871	rbpms	90	99.425	ENSNBRG00000003313	RBPMS	97	99.425	Neolamprologus_brichardi
ENSSMAG00000010871	rbpms	99	84.021	ENSNLEG00000036183	-	99	84.021	Nomascus_leucogenys
ENSSMAG00000010871	rbpms	67	84.615	ENSOPRG00000013151	RBPMS	59	84.615	Ochotona_princeps
ENSSMAG00000010871	rbpms	99	84.536	ENSODEG00000006700	RBPMS	99	84.536	Octodon_degus
ENSSMAG00000010871	rbpms	90	99.425	ENSONIG00000007546	RBPMS	100	99.425	Oreochromis_niloticus
ENSSMAG00000010871	rbpms	90	85.143	ENSOCUG00000008572	RBPMS	80	85.143	Oryctolagus_cuniculus
ENSSMAG00000010871	rbpms	100	96.392	ENSORLG00000004135	-	100	96.392	Oryzias_latipes
ENSSMAG00000010871	rbpms	100	96.907	ENSORLG00020016179	RBPMS	100	96.907	Oryzias_latipes_hni
ENSSMAG00000010871	rbpms	100	96.907	ENSORLG00015013770	RBPMS	100	96.907	Oryzias_latipes_hsok
ENSSMAG00000010871	rbpms	100	96.392	ENSOMEG00000005044	RBPMS	100	96.392	Oryzias_melastigma
ENSSMAG00000010871	rbpms	92	83.799	ENSOGAG00000030298	RBPMS	80	83.799	Otolemur_garnettii
ENSSMAG00000010871	rbpms	65	83.333	ENSOARG00000010366	RBPMS	89	83.333	Ovis_aries
ENSSMAG00000010871	rbpms	89	87.931	ENSPPAG00000033108	RBPMS	100	87.931	Pan_paniscus
ENSSMAG00000010871	rbpms	99	84.536	ENSPPRG00000004836	RBPMS	99	84.536	Panthera_pardus
ENSSMAG00000010871	rbpms	89	87.931	ENSPTIG00000015964	RBPMS	89	87.931	Panthera_tigris_altaica
ENSSMAG00000010871	rbpms	99	84.536	ENSPTRG00000020135	RBPMS	99	84.536	Pan_troglodytes
ENSSMAG00000010871	rbpms	99	84.536	ENSPANG00000008143	RBPMS	99	84.536	Papio_anubis
ENSSMAG00000010871	rbpms	97	87.831	ENSPKIG00000004836	rbpms	100	87.831	Paramormyrops_kingsleyae
ENSSMAG00000010871	rbpms	100	90.206	ENSPKIG00000000535	-	100	90.206	Paramormyrops_kingsleyae
ENSSMAG00000010871	rbpms	89	86.207	ENSPSIG00000006136	RBPMS	99	86.207	Pelodiscus_sinensis
ENSSMAG00000010871	rbpms	81	97.468	ENSPMGG00000018012	RBPMS	74	97.468	Periophthalmus_magnuspinnatus
ENSSMAG00000010871	rbpms	100	79.798	ENSPEMG00000021130	Rbpms	100	83.333	Peromyscus_maniculatus_bairdii
ENSSMAG00000010871	rbpms	92	85.556	ENSPCIG00000019298	-	71	83.041	Phascolarctos_cinereus
ENSSMAG00000010871	rbpms	100	96.392	ENSPFOG00000017158	RBPMS	100	96.392	Poecilia_formosa
ENSSMAG00000010871	rbpms	100	96.392	ENSPLAG00000010767	RBPMS	100	96.392	Poecilia_latipinna
ENSSMAG00000010871	rbpms	100	96.392	ENSPMEG00000009788	RBPMS	100	96.392	Poecilia_mexicana
ENSSMAG00000010871	rbpms	100	96.392	ENSPREG00000016959	RBPMS	100	96.392	Poecilia_reticulata
ENSSMAG00000010871	rbpms	90	85.143	ENSPPYG00000018487	RBPMS	94	77.500	Pongo_abelii
ENSSMAG00000010871	rbpms	57	90.000	ENSPCAG00000013493	-	100	90.000	Procavia_capensis
ENSSMAG00000010871	rbpms	92	69.274	ENSPCOG00000015948	RBPMS	75	86.154	Propithecus_coquereli
ENSSMAG00000010871	rbpms	90	85.143	ENSPVAG00000001661	RBPMS	80	85.143	Pteropus_vampyrus
ENSSMAG00000010871	rbpms	100	96.907	ENSPNYG00000001172	RBPMS	100	96.907	Pundamilia_nyererei
ENSSMAG00000010871	rbpms	99	93.750	ENSPNAG00000029160	RBPMS	99	93.750	Pygocentrus_nattereri
ENSSMAG00000010871	rbpms	92	78.571	ENSRNOG00000013328	Rbpms	88	82.967	Rattus_norvegicus
ENSSMAG00000010871	rbpms	89	87.931	ENSRBIG00000038218	RBPMS	100	87.931	Rhinopithecus_bieti
ENSSMAG00000010871	rbpms	99	84.536	ENSRROG00000042518	RBPMS	99	84.536	Rhinopithecus_roxellana
ENSSMAG00000010871	rbpms	99	84.021	ENSSBOG00000026670	RBPMS	99	84.021	Saimiri_boliviensis_boliviensis
ENSSMAG00000010871	rbpms	91	86.517	ENSSHAG00000010114	RBPMS	92	86.517	Sarcophilus_harrisii
ENSSMAG00000010871	rbpms	90	89.655	ENSSFOG00015017481	-	100	85.714	Scleropages_formosus
ENSSMAG00000010871	rbpms	100	90.722	ENSSFOG00015000417	rbpms	100	90.722	Scleropages_formosus
ENSSMAG00000010871	rbpms	100	96.392	ENSSDUG00000010894	RBPMS	100	96.392	Seriola_dumerili
ENSSMAG00000010871	rbpms	100	96.392	ENSSLDG00000012916	RBPMS	100	96.392	Seriola_lalandi_dorsalis
ENSSMAG00000010871	rbpms	90	81.356	ENSSARG00000000274	RBPMS	81	81.356	Sorex_araneus
ENSSMAG00000010871	rbpms	100	78.974	ENSSPUG00000017525	RBPMS	75	78.974	Sphenodon_punctatus
ENSSMAG00000010871	rbpms	79	92.903	ENSSPAG00000004777	rbpms	95	92.903	Stegastes_partitus
ENSSMAG00000010871	rbpms	99	84.536	ENSSSCG00000015846	RBPMS	99	84.536	Sus_scrofa
ENSSMAG00000010871	rbpms	97	82.105	ENSTGUG00000001776	RBPMS	100	82.105	Taeniopygia_guttata
ENSSMAG00000010871	rbpms	100	95.361	ENSTRUG00000000041	RBPMS	100	95.361	Takifugu_rubripes
ENSSMAG00000010871	rbpms	90	85.632	ENSTTRG00000012451	RBPMS	80	85.632	Tursiops_truncatus
ENSSMAG00000010871	rbpms	60	86.207	ENSUAMG00000026353	RBPMS	76	87.179	Ursus_americanus
ENSSMAG00000010871	rbpms	85	86.667	ENSUMAG00000007347	RBPMS	76	88.462	Ursus_maritimus
ENSSMAG00000010871	rbpms	79	89.032	ENSVPAG00000010991	RBPMS	79	89.032	Vicugna_pacos
ENSSMAG00000010871	rbpms	99	84.536	ENSVVUG00000019770	RBPMS	99	84.536	Vulpes_vulpes
ENSSMAG00000010871	rbpms	89	87.931	ENSXETG00000011290	rbpms	100	87.931	Xenopus_tropicalis
ENSSMAG00000010871	rbpms	90	93.103	ENSXCOG00000002436	RBPMS	90	93.103	Xiphophorus_couchianus
ENSSMAG00000010871	rbpms	100	96.392	ENSXMAG00000027637	RBPMS	100	96.392	Xiphophorus_maculatus