EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSSMAG00000010918 (Gene tree)
Gene ID: -
Gene Symbol: pum1
Alias: fb96a03|si:ch211-285e16.1|wu:fb96a03|wu:fb96a08|zgc:63671
Full Name: pumilio RNA-binding family member 1
Gene Type: protein_coding
Species: Scophthalmus_maximus
Status: putative
Strand: Plus strand
Length: 22684 bases
Position: chr22:9634446-9657129
Accession: ZDB-GENE-030131-2074
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSMAP00000018015	PUF	PF00806.19	1.5e-70	1	8
ENSSMAP00000018015	PUF	PF00806.19	1.5e-70	2	8
ENSSMAP00000018015	PUF	PF00806.19	1.5e-70	3	8
ENSSMAP00000018015	PUF	PF00806.19	1.5e-70	4	8
ENSSMAP00000018015	PUF	PF00806.19	1.5e-70	5	8
ENSSMAP00000018015	PUF	PF00806.19	1.5e-70	6	8
ENSSMAP00000018015	PUF	PF00806.19	1.5e-70	7	8
ENSSMAP00000018015	PUF	PF00806.19	1.5e-70	8	8
ENSSMAP00000017941	PUF	PF00806.19	3e-69	1	8
ENSSMAP00000017941	PUF	PF00806.19	3e-69	2	8
ENSSMAP00000017941	PUF	PF00806.19	3e-69	3	8
ENSSMAP00000017941	PUF	PF00806.19	3e-69	4	8
ENSSMAP00000017941	PUF	PF00806.19	3e-69	5	8
ENSSMAP00000017941	PUF	PF00806.19	3e-69	6	8
ENSSMAP00000017941	PUF	PF00806.19	3e-69	7	8
ENSSMAP00000017941	PUF	PF00806.19	3e-69	8	8
ENSSMAP00000017975	PUF	PF00806.19	3e-69	1	8
ENSSMAP00000017975	PUF	PF00806.19	3e-69	2	8
ENSSMAP00000017975	PUF	PF00806.19	3e-69	3	8
ENSSMAP00000017975	PUF	PF00806.19	3e-69	4	8
ENSSMAP00000017975	PUF	PF00806.19	3e-69	5	8
ENSSMAP00000017975	PUF	PF00806.19	3e-69	6	8
ENSSMAP00000017975	PUF	PF00806.19	3e-69	7	8
ENSSMAP00000017975	PUF	PF00806.19	3e-69	8	8

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSMAT00000018233	-	2946	-	ENSSMAP00000018015	981 (aa)	-	-
ENSSMAT00000018192	-	7386	-	ENSSMAP00000017975	1163 (aa)	-	-
ENSSMAT00000018157	-	7409	-	ENSSMAP00000017941	1163 (aa)	-	-

Gene Model

Click here to download ENSSMAG00000010918's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSMAG00000010918's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSSMAG00000010918	pum1	97	64.286	ENSSMAG00000018236	pum2	74	84.578

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSMAG00000010918	pum1	100	91.525	ENSG00000134644	PUM1	98	91.566	Homo_sapiens
ENSSMAG00000010918	pum1	100	99.518	ENSAPOG00000021632	pum1	100	99.518	Acanthochromis_polyacanthus
ENSSMAG00000010918	pum1	100	91.084	ENSAMEG00000017656	PUM1	87	88.506	Ailuropoda_melanoleuca
ENSSMAG00000010918	pum1	100	96.561	ENSACIG00000021013	pum1	100	96.561	Amphilophus_citrinellus
ENSSMAG00000010918	pum1	100	99.518	ENSAOCG00000003944	pum1	100	97.592	Amphiprion_ocellaris
ENSSMAG00000010918	pum1	100	99.518	ENSAPEG00000014550	pum1	100	97.592	Amphiprion_percula
ENSSMAG00000010918	pum1	100	99.518	ENSATEG00000016004	pum1	100	97.248	Anabas_testudineus
ENSSMAG00000010918	pum1	100	91.566	ENSAPLG00000009351	PUM1	90	88.506	Anas_platyrhynchos
ENSSMAG00000010918	pum1	100	91.566	ENSACAG00000000682	PUM1	88	88.506	Anolis_carolinensis
ENSSMAG00000010918	pum1	100	91.283	ENSANAG00000027865	PUM1	100	91.325	Aotus_nancymaae
ENSSMAG00000010918	pum1	92	96.901	ENSACLG00000019354	pum1	100	96.901	Astatotilapia_calliptera
ENSSMAG00000010918	pum1	100	91.525	ENSBTAG00000018979	PUM1	100	92.048	Bos_taurus
ENSSMAG00000010918	pum1	100	91.084	ENSCJAG00000006035	PUM1	100	91.566	Callithrix_jacchus
ENSSMAG00000010918	pum1	100	91.084	ENSCAFG00020024616	PUM1	98	91.566	Canis_lupus_dingo
ENSSMAG00000010918	pum1	100	91.525	ENSCHIG00000012952	PUM1	100	91.566	Capra_hircus
ENSSMAG00000010918	pum1	100	91.084	ENSTSYG00000008868	PUM1	100	82.410	Carlito_syrichta
ENSSMAG00000010918	pum1	100	90.843	ENSCPOG00000031613	PUM1	100	80.817	Cavia_porcellus
ENSSMAG00000010918	pum1	94	91.566	ENSCATG00000017991	PUM1	93	92.048	Cercocebus_atys
ENSSMAG00000010918	pum1	100	90.843	ENSCLAG00000007662	PUM1	100	91.325	Chinchilla_lanigera
ENSSMAG00000010918	pum1	100	91.084	ENSCSAG00000001028	PUM1	90	88.506	Chlorocebus_sabaeus
ENSSMAG00000010918	pum1	99	67.182	ENSCHOG00000010245	PUM1	93	65.700	Choloepus_hoffmanni
ENSSMAG00000010918	pum1	100	91.807	ENSCPBG00000009288	PUM1	99	88.736	Chrysemys_picta_bellii
ENSSMAG00000010918	pum1	100	91.084	ENSCANG00000042606	PUM1	100	91.566	Colobus_angolensis_palliatus
ENSSMAG00000010918	pum1	100	90.799	ENSCGRG00001024949	Pum1	100	82.447	Cricetulus_griseus_chok1gshd
ENSSMAG00000010918	pum1	100	90.799	ENSCGRG00000014197	Pum1	100	82.447	Cricetulus_griseus_crigri
ENSSMAG00000010918	pum1	92	95.595	ENSCSEG00000015981	pum1	100	95.595	Cynoglossus_semilaevis
ENSSMAG00000010918	pum1	100	98.072	ENSCVAG00000007043	pum1	100	96.303	Cyprinodon_variegatus
ENSSMAG00000010918	pum1	100	83.489	ENSDARG00000099256	pum1	100	81.271	Danio_rerio
ENSSMAG00000010918	pum1	100	90.602	ENSDNOG00000010939	PUM1	90	88.046	Dasypus_novemcinctus
ENSSMAG00000010918	pum1	100	77.922	ENSDORG00000001875	Pum1	100	76.076	Dipodomys_ordii
ENSSMAG00000010918	pum1	98	77.957	ENSETEG00000004355	PUM1	87	75.765	Echinops_telfairi
ENSSMAG00000010918	pum1	100	90.602	ENSEASG00005010813	PUM1	90	88.046	Equus_asinus_asinus
ENSSMAG00000010918	pum1	100	90.602	ENSECAG00000021369	PUM1	90	88.046	Equus_caballus
ENSSMAG00000010918	pum1	76	90.843	ENSEEUG00000003871	PUM1	74	91.111	Erinaceus_europaeus
ENSSMAG00000010918	pum1	100	96.386	ENSELUG00000002409	pum1	100	94.068	Esox_lucius
ENSSMAG00000010918	pum1	100	91.084	ENSFCAG00000010374	PUM1	100	92.048	Felis_catus
ENSSMAG00000010918	pum1	100	91.566	ENSFALG00000001214	PUM1	87	88.506	Ficedula_albicollis
ENSSMAG00000010918	pum1	100	90.777	ENSFDAG00000011319	PUM1	100	80.817	Fukomys_damarensis
ENSSMAG00000010918	pum1	96	90.316	ENSGMOG00000010491	pum1	76	98.795	Gadus_morhua
ENSSMAG00000010918	pum1	100	91.566	ENSGALG00000042598	PUM1	99	90.342	Gallus_gallus
ENSSMAG00000010918	pum1	100	96.819	ENSGAFG00000015617	pum1	100	96.819	Gambusia_affinis
ENSSMAG00000010918	pum1	100	98.795	ENSGACG00000005717	pum1	100	96.466	Gasterosteus_aculeatus
ENSSMAG00000010918	pum1	100	91.807	ENSGAGG00000001290	PUM1	99	90.543	Gopherus_agassizii
ENSSMAG00000010918	pum1	100	91.084	ENSGGOG00000011983	PUM1	100	91.566	Gorilla_gorilla
ENSSMAG00000010918	pum1	100	97.077	ENSHBUG00000018718	pum1	100	97.077	Haplochromis_burtoni
ENSSMAG00000010918	pum1	100	90.534	ENSHGLG00000013819	Pum1	100	80.693	Heterocephalus_glaber_female
ENSSMAG00000010918	pum1	100	90.534	ENSHGLG00100008621	Pum1	100	80.693	Heterocephalus_glaber_male
ENSSMAG00000010918	pum1	92	90.244	ENSHCOG00000005149	pum1	100	88.837	Hippocampus_comes
ENSSMAG00000010918	pum1	100	95.422	ENSIPUG00000020421	pum1	100	80.960	Ictalurus_punctatus
ENSSMAG00000010918	pum1	100	90.843	ENSSTOG00000010757	PUM1	100	81.064	Ictidomys_tridecemlineatus
ENSSMAG00000010918	pum1	100	91.084	ENSJJAG00000000530	Pum1	100	81.188	Jaculus_jaculus
ENSSMAG00000010918	pum1	100	98.554	ENSKMAG00000003481	pum1	100	96.733	Kryptolebias_marmoratus
ENSSMAG00000010918	pum1	100	99.518	ENSLBEG00000002527	pum1	100	97.420	Labrus_bergylta
ENSSMAG00000010918	pum1	100	75.848	ENSLACG00000017188	PUM1	99	73.510	Latimeria_chalumnae
ENSSMAG00000010918	pum1	100	82.083	ENSLOCG00000005210	pum1	99	81.250	Lepisosteus_oculatus
ENSSMAG00000010918	pum1	100	92.530	ENSLAFG00000003178	PUM1	90	89.425	Loxodonta_africana
ENSSMAG00000010918	pum1	100	91.084	ENSMFAG00000010291	PUM1	100	92.048	Macaca_fascicularis
ENSSMAG00000010918	pum1	100	91.084	ENSMMUG00000013520	PUM1	100	91.566	Macaca_mulatta
ENSSMAG00000010918	pum1	100	91.084	ENSMNEG00000034639	PUM1	100	91.566	Macaca_nemestrina
ENSSMAG00000010918	pum1	100	91.084	ENSMLEG00000038743	PUM1	100	91.566	Mandrillus_leucophaeus
ENSSMAG00000010918	pum1	100	97.248	ENSMAMG00000011606	pum1	100	97.248	Mastacembelus_armatus
ENSSMAG00000010918	pum1	100	97.077	ENSMZEG00005005834	pum1	100	97.077	Maylandia_zebra
ENSSMAG00000010918	pum1	100	91.566	ENSMGAG00000000724	PUM1	90	88.506	Meleagris_gallopavo
ENSSMAG00000010918	pum1	100	90.843	ENSMAUG00000022090	Pum1	100	82.921	Mesocricetus_auratus
ENSSMAG00000010918	pum1	100	90.843	ENSMICG00000007713	-	100	80.817	Microcebus_murinus
ENSSMAG00000010918	pum1	100	90.557	ENSMICG00000012213	-	100	88.675	Microcebus_murinus
ENSSMAG00000010918	pum1	100	90.843	ENSMOCG00000015463	Pum1	100	82.571	Microtus_ochrogaster
ENSSMAG00000010918	pum1	100	91.548	ENSMMOG00000019817	pum1	100	91.548	Mola_mola
ENSSMAG00000010918	pum1	100	91.325	ENSMODG00000017067	PUM1	100	74.772	Monodelphis_domestica
ENSSMAG00000010918	pum1	100	96.640	ENSMALG00000016399	pum1	100	99.518	Monopterus_albus
ENSSMAG00000010918	pum1	100	91.525	MGP_CAROLIEiJ_G0026549	Pum1	100	80.693	Mus_caroli
ENSSMAG00000010918	pum1	100	91.283	ENSMUSG00000028580	Pum1	100	80.569	Mus_musculus
ENSSMAG00000010918	pum1	100	91.283	MGP_PahariEiJ_G0028881	Pum1	100	80.569	Mus_pahari
ENSSMAG00000010918	pum1	100	91.283	MGP_SPRETEiJ_G0027529	Pum1	100	80.569	Mus_spretus
ENSSMAG00000010918	pum1	100	91.566	ENSMPUG00000015454	PUM1	90	88.506	Mustela_putorius_furo
ENSSMAG00000010918	pum1	100	91.525	ENSMLUG00000006490	PUM1	90	88.915	Myotis_lucifugus
ENSSMAG00000010918	pum1	100	90.843	ENSNGAG00000002378	Pum1	100	81.064	Nannospalax_galili
ENSSMAG00000010918	pum1	79	98.000	ENSNBRG00000010689	pum1	100	98.000	Neolamprologus_brichardi
ENSSMAG00000010918	pum1	100	87.952	ENSNLEG00000001151	PUM1	100	88.434	Nomascus_leucogenys
ENSSMAG00000010918	pum1	73	78.621	ENSMEUG00000000976	-	67	80.608	Notamacropus_eugenii
ENSSMAG00000010918	pum1	82	91.589	ENSOPRG00000001776	PUM1	75	91.589	Ochotona_princeps
ENSSMAG00000010918	pum1	100	90.843	ENSODEG00000003465	PUM1	100	80.817	Octodon_degus
ENSSMAG00000010918	pum1	100	99.277	ENSONIG00000002290	pum1	100	97.420	Oreochromis_niloticus
ENSSMAG00000010918	pum1	92	64.191	ENSOANG00000004902	-	100	60.830	Ornithorhynchus_anatinus
ENSSMAG00000010918	pum1	99	91.241	ENSOCUG00000008641	PUM1	89	88.631	Oryctolagus_cuniculus
ENSSMAG00000010918	pum1	100	98.072	ENSORLG00000011482	pum1	100	96.401	Oryzias_latipes
ENSSMAG00000010918	pum1	100	98.072	ENSORLG00020019461	pum1	100	96.401	Oryzias_latipes_hni
ENSSMAG00000010918	pum1	100	98.072	ENSORLG00015011375	pum1	100	96.401	Oryzias_latipes_hsok
ENSSMAG00000010918	pum1	100	93.807	ENSOMEG00000009312	pum1	100	93.807	Oryzias_melastigma
ENSSMAG00000010918	pum1	100	83.453	ENSOGAG00000011063	PUM1	100	71.997	Otolemur_garnettii
ENSSMAG00000010918	pum1	100	91.084	ENSOARG00000001899	PUM1	100	91.566	Ovis_aries
ENSSMAG00000010918	pum1	100	91.084	ENSPPAG00000044003	PUM1	100	91.566	Pan_paniscus
ENSSMAG00000010918	pum1	100	91.084	ENSPPRG00000001370	PUM1	100	81.188	Panthera_pardus
ENSSMAG00000010918	pum1	100	91.084	ENSPTIG00000010798	PUM1	100	81.559	Panthera_tigris_altaica
ENSSMAG00000010918	pum1	100	91.084	ENSPTRG00000000453	PUM1	100	91.566	Pan_troglodytes
ENSSMAG00000010918	pum1	100	91.084	ENSPANG00000016338	PUM1	100	92.048	Papio_anubis
ENSSMAG00000010918	pum1	100	92.530	ENSPKIG00000010578	pum1	100	85.138	Paramormyrops_kingsleyae
ENSSMAG00000010918	pum1	100	91.807	ENSPSIG00000014118	PUM1	90	88.736	Pelodiscus_sinensis
ENSSMAG00000010918	pum1	79	97.458	ENSPMGG00000005836	pum1	100	97.458	Periophthalmus_magnuspinnatus
ENSSMAG00000010918	pum1	100	90.843	ENSPEMG00000010009	Pum1	100	82.921	Peromyscus_maniculatus_bairdii
ENSSMAG00000010918	pum1	100	91.325	ENSPCIG00000014151	PUM1	100	91.566	Phascolarctos_cinereus
ENSSMAG00000010918	pum1	100	98.072	ENSPFOG00000007289	pum1	99	97.222	Poecilia_formosa
ENSSMAG00000010918	pum1	100	98.072	ENSPLAG00000007256	pum1	100	96.190	Poecilia_latipinna
ENSSMAG00000010918	pum1	100	98.072	ENSPMEG00000019543	pum1	99	95.892	Poecilia_mexicana
ENSSMAG00000010918	pum1	100	98.072	ENSPREG00000005195	pum1	100	96.733	Poecilia_reticulata
ENSSMAG00000010918	pum1	100	91.084	ENSPPYG00000001621	PUM1	90	88.506	Pongo_abelii
ENSSMAG00000010918	pum1	81	92.901	ENSPCAG00000001979	PUM1	73	93.519	Procavia_capensis
ENSSMAG00000010918	pum1	100	90.843	ENSPCOG00000004398	PUM1	100	80.817	Propithecus_coquereli
ENSSMAG00000010918	pum1	100	85.301	ENSPVAG00000005207	PUM1	87	82.989	Pteropus_vampyrus
ENSSMAG00000010918	pum1	100	97.163	ENSPNYG00000009518	pum1	100	97.163	Pundamilia_nyererei
ENSSMAG00000010918	pum1	100	82.542	ENSPNAG00000026728	pum1	100	81.949	Pygocentrus_nattereri
ENSSMAG00000010918	pum1	100	82.664	ENSRNOG00000011709	Pum1	90	88.684	Rattus_norvegicus
ENSSMAG00000010918	pum1	100	91.084	ENSRBIG00000042521	PUM1	100	92.048	Rhinopithecus_bieti
ENSSMAG00000010918	pum1	100	91.525	ENSRROG00000020156	PUM1	100	91.566	Rhinopithecus_roxellana
ENSSMAG00000010918	pum1	100	91.084	ENSSBOG00000032037	PUM1	100	91.566	Saimiri_boliviensis_boliviensis
ENSSMAG00000010918	pum1	100	91.325	ENSSHAG00000010918	PUM1	89	88.046	Sarcophilus_harrisii
ENSSMAG00000010918	pum1	100	99.518	ENSSDUG00000009021	pum1	100	98.022	Seriola_dumerili
ENSSMAG00000010918	pum1	94	97.884	ENSSLDG00000009667	pum1	100	97.884	Seriola_lalandi_dorsalis
ENSSMAG00000010918	pum1	92	91.084	ENSSARG00000003055	PUM1	81	88.506	Sorex_araneus
ENSSMAG00000010918	pum1	100	91.566	ENSSPUG00000006267	PUM1	90	88.506	Sphenodon_punctatus
ENSSMAG00000010918	pum1	100	99.518	ENSSPAG00000016636	pum1	100	97.678	Stegastes_partitus
ENSSMAG00000010918	pum1	100	91.525	ENSSSCG00000003591	PUM1	100	92.048	Sus_scrofa
ENSSMAG00000010918	pum1	100	97.248	ENSTRUG00000013121	pum1	100	98.500	Takifugu_rubripes
ENSSMAG00000010918	pum1	100	96.325	ENSTNIG00000016983	pum1	99	96.325	Tetraodon_nigroviridis
ENSSMAG00000010918	pum1	87	90.244	ENSTBEG00000013810	PUM1	89	90.244	Tupaia_belangeri
ENSSMAG00000010918	pum1	100	90.602	ENSTTRG00000007436	PUM1	87	88.046	Tursiops_truncatus
ENSSMAG00000010918	pum1	98	90.615	ENSUAMG00000018262	-	89	87.234	Ursus_americanus
ENSSMAG00000010918	pum1	94	91.566	ENSUMAG00000009211	PUM1	100	92.048	Ursus_maritimus
ENSSMAG00000010918	pum1	91	91.084	ENSVPAG00000005902	PUM1	92	81.559	Vicugna_pacos
ENSSMAG00000010918	pum1	100	91.525	ENSVVUG00000014631	PUM1	100	92.048	Vulpes_vulpes
ENSSMAG00000010918	pum1	100	72.832	ENSXETG00000012904	pum1	99	71.795	Xenopus_tropicalis
ENSSMAG00000010918	pum1	100	96.475	ENSXMAG00000002945	pum1	100	96.508	Xiphophorus_maculatus