EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSSMAG00000010960 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Scophthalmus_maximus
Status: putative
Strand: Minus strand
Length: 8535 bases
Position: chr2:7728505-7737039
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSMAP00000017900	RRM_1	PF00076.22	6.1e-10	1	1
ENSSMAP00000017867	RRM_1	PF00076.22	6.3e-10	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSMAT00000018083	-	3119	-	ENSSMAP00000017867	627 (aa)	-	-
ENSSMAT00000018117	-	3155	-	ENSSMAP00000017900	639 (aa)	-	A0A2U9B187

Gene Model

Click here to download ENSSMAG00000010960's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSMAG00000010960's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSSMAG00000010960	-	75	36.782	ENSSMAG00000008147	si:dkey-33c12.4	51	42.373
ENSSMAG00000010960	-	59	33.210	ENSSMAG00000002904	zgc:123010	65	36.500

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSMAG00000010960	-	99	59.002	ENSAPOG00000022403	-	100	60.968	Acanthochromis_polyacanthus
ENSSMAG00000010960	-	60	40.260	ENSAPOG00000001034	-	63	40.260	Acanthochromis_polyacanthus
ENSSMAG00000010960	-	55	40.390	ENSAPOG00000005058	si:dkey-33c12.4	51	40.390	Acanthochromis_polyacanthus
ENSSMAG00000010960	-	99	60.423	ENSAOCG00000000431	-	100	62.387	Amphiprion_ocellaris
ENSSMAG00000010960	-	99	60.210	ENSAPEG00000023603	-	100	61.261	Amphiprion_percula
ENSSMAG00000010960	-	99	61.608	ENSATEG00000018302	-	99	62.853	Anabas_testudineus
ENSSMAG00000010960	-	63	40.394	ENSATEG00000018885	si:dkey-33c12.4	74	36.831	Anabas_testudineus
ENSSMAG00000010960	-	55	41.989	ENSACLG00000014192	si:dkey-33c12.4	77	34.766	Astatotilapia_calliptera
ENSSMAG00000010960	-	95	59.520	ENSACLG00000003019	-	99	60.800	Astatotilapia_calliptera
ENSSMAG00000010960	-	85	42.407	ENSAMXG00000010871	si:dkey-33c12.4	85	38.191	Astyanax_mexicanus
ENSSMAG00000010960	-	59	33.508	ENSCPBG00000024454	-	51	33.085	Chrysemys_picta_bellii
ENSSMAG00000010960	-	98	55.846	ENSCSEG00000002755	-	99	56.431	Cynoglossus_semilaevis
ENSSMAG00000010960	-	95	56.019	ENSCVAG00000004187	-	99	57.835	Cyprinodon_variegatus
ENSSMAG00000010960	-	74	42.769	ENSDARG00000057890	si:dkey-33c12.4	89	39.841	Danio_rerio
ENSSMAG00000010960	-	62	32.041	ENSEBUG00000001368	-	57	31.172	Eptatretus_burgeri
ENSSMAG00000010960	-	85	44.689	ENSELUG00000001633	-	88	43.023	Esox_lucius
ENSSMAG00000010960	-	80	40.840	ENSELUG00000002009	si:dkey-33c12.4	87	38.660	Esox_lucius
ENSSMAG00000010960	-	90	56.923	ENSFHEG00000009983	-	96	57.265	Fundulus_heteroclitus
ENSSMAG00000010960	-	52	39.193	ENSFHEG00000005521	si:dkey-33c12.4	72	35.853	Fundulus_heteroclitus
ENSSMAG00000010960	-	99	56.641	ENSGAFG00000016594	-	99	57.230	Gambusia_affinis
ENSSMAG00000010960	-	55	41.274	ENSHBUG00000010735	si:dkey-33c12.4	74	35.130	Haplochromis_burtoni
ENSSMAG00000010960	-	75	44.033	ENSIPUG00000005998	si:dkey-33c12.4	66	46.288	Ictalurus_punctatus
ENSSMAG00000010960	-	53	40.120	ENSKMAG00000016610	si:dkey-33c12.4	70	35.343	Kryptolebias_marmoratus
ENSSMAG00000010960	-	97	58.740	ENSKMAG00000006468	-	99	58.906	Kryptolebias_marmoratus
ENSSMAG00000010960	-	100	52.180	ENSLBEG00000028046	-	100	51.198	Labrus_bergylta
ENSSMAG00000010960	-	58	39.130	ENSLBEG00000021088	-	54	40.058	Labrus_bergylta
ENSSMAG00000010960	-	58	39.402	ENSLBEG00000017203	-	55	40.233	Labrus_bergylta
ENSSMAG00000010960	-	67	42.210	ENSLACG00000004602	-	57	47.200	Latimeria_chalumnae
ENSSMAG00000010960	-	80	42.939	ENSLOCG00000001861	-	69	43.611	Lepisosteus_oculatus
ENSSMAG00000010960	-	58	32.927	ENSLOCG00000008967	zgc:123010	67	33.333	Lepisosteus_oculatus
ENSSMAG00000010960	-	75	36.570	ENSMAMG00000000111	si:dkey-33c12.4	74	36.842	Mastacembelus_armatus
ENSSMAG00000010960	-	95	59.061	ENSMAMG00000004311	-	99	58.199	Mastacembelus_armatus
ENSSMAG00000010960	-	55	41.713	ENSMZEG00005014276	si:dkey-33c12.4	74	35.029	Maylandia_zebra
ENSSMAG00000010960	-	95	59.230	ENSMZEG00005000585	-	99	60.960	Maylandia_zebra
ENSSMAG00000010960	-	100	60.656	ENSMALG00000003167	-	100	59.762	Monopterus_albus
ENSSMAG00000010960	-	51	43.675	ENSMALG00000002265	si:dkey-33c12.4	74	36.907	Monopterus_albus
ENSSMAG00000010960	-	98	60.465	ENSONIG00000007538	-	96	82.353	Oreochromis_niloticus
ENSSMAG00000010960	-	53	39.640	ENSORLG00000029651	si:dkey-33c12.4	51	39.881	Oryzias_latipes
ENSSMAG00000010960	-	97	55.000	ENSORLG00000030385	-	97	54.219	Oryzias_latipes
ENSSMAG00000010960	-	98	53.988	ENSORLG00015008400	-	99	53.221	Oryzias_latipes_hsok
ENSSMAG00000010960	-	98	55.988	ENSOMEG00000009428	-	99	55.146	Oryzias_melastigma
ENSSMAG00000010960	-	67	33.405	ENSOMEG00000008913	-	74	32.400	Oryzias_melastigma
ENSSMAG00000010960	-	81	42.750	ENSPKIG00000011819	-	64	42.495	Paramormyrops_kingsleyae
ENSSMAG00000010960	-	76	62.708	ENSPFOG00000017092	-	98	62.190	Poecilia_formosa
ENSSMAG00000010960	-	52	40.816	ENSPFOG00000009143	si:dkey-33c12.4	70	36.326	Poecilia_formosa
ENSSMAG00000010960	-	52	40.816	ENSPLAG00000022537	si:dkey-33c12.4	72	36.326	Poecilia_latipinna
ENSSMAG00000010960	-	96	58.452	ENSPMEG00000009905	-	99	58.242	Poecilia_mexicana
ENSSMAG00000010960	-	52	40.525	ENSPMEG00000015590	si:dkey-33c12.4	50	40.286	Poecilia_mexicana
ENSSMAG00000010960	-	96	58.095	ENSPREG00000016861	-	99	58.517	Poecilia_reticulata
ENSSMAG00000010960	-	55	41.713	ENSPNYG00000018262	si:dkey-33c12.4	74	35.050	Pundamilia_nyererei
ENSSMAG00000010960	-	95	58.909	ENSPNYG00000001047	-	99	60.640	Pundamilia_nyererei
ENSSMAG00000010960	-	62	47.680	ENSPNAG00000018386	si:dkey-33c12.4	68	44.635	Pygocentrus_nattereri
ENSSMAG00000010960	-	63	46.819	ENSSFOG00015005186	-	62	46.262	Scleropages_formosus
ENSSMAG00000010960	-	67	44.000	ENSSFOG00015009199	-	71	41.970	Scleropages_formosus
ENSSMAG00000010960	-	95	72.947	ENSSDUG00000010976	-	99	72.464	Seriola_dumerili
ENSSMAG00000010960	-	63	40.244	ENSSDUG00000003213	si:dkey-33c12.4	55	42.407	Seriola_dumerili
ENSSMAG00000010960	-	63	40.488	ENSSLDG00000009448	si:dkey-33c12.4	51	42.693	Seriola_lalandi_dorsalis
ENSSMAG00000010960	-	91	71.906	ENSSLDG00000012846	-	99	72.333	Seriola_lalandi_dorsalis
ENSSMAG00000010960	-	99	60.790	ENSSPAG00000004843	-	100	63.182	Stegastes_partitus
ENSSMAG00000010960	-	52	41.265	ENSSPAG00000022577	-	50	40.845	Stegastes_partitus
ENSSMAG00000010960	-	99	42.790	ENSTRUG00000000057	-	100	41.850	Takifugu_rubripes
ENSSMAG00000010960	-	52	40.525	ENSXMAG00000018535	si:dkey-33c12.4	70	36.518	Xiphophorus_maculatus