EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSSMAG00000011047 (Gene tree)
Gene ID: -
Gene Symbol: nom1
Alias: si:ch211-266o5.1
Full Name: nucleolar protein with MIF4G domain 1
Gene Type: protein_coding
Species: Scophthalmus_maximus
Status: putative
Strand: Plus strand
Length: 6991 bases
Position: chr21:290032-297022
Accession: ZDB-GENE-060503-321
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSMAP00000018026	MA3	PF02847.17	5.5e-23	1	1
ENSSMAP00000018034	MA3	PF02847.17	6.6e-23	1	1
ENSSMAP00000018050	MA3	PF02847.17	6.6e-23	1	1
ENSSMAP00000018026	MIF4G	PF02854.19	6.5e-17	1	1
ENSSMAP00000018034	MIF4G	PF02854.19	7.4e-17	1	1
ENSSMAP00000018050	MIF4G	PF02854.19	7.4e-17	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSMAT00000018271	-	3363	-	ENSSMAP00000018050	845 (aa)	-	A0A2U9CXB4
ENSSMAT00000018247	-	3941	-	ENSSMAP00000018026	787 (aa)	-	-
ENSSMAT00000018255	-	3448	-	ENSSMAP00000018034	845 (aa)	-	A0A2U9CXB4

Gene Model

Click here to download ENSSMAG00000011047's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSMAG00000011047's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSMAG00000011047	nom1	98	54.481	ENSG00000146909	NOM1	95	53.684	Homo_sapiens
ENSSMAG00000011047	nom1	64	88.683	ENSAPOG00000012073	nom1	100	77.416	Acanthochromis_polyacanthus
ENSSMAG00000011047	nom1	81	58.739	ENSAMEG00000001412	NOM1	96	57.601	Ailuropoda_melanoleuca
ENSSMAG00000011047	nom1	87	88.359	ENSACIG00000018050	nom1	100	73.939	Amphilophus_citrinellus
ENSSMAG00000011047	nom1	64	88.662	ENSAOCG00000006229	nom1	100	77.921	Amphiprion_ocellaris
ENSSMAG00000011047	nom1	98	77.238	ENSAPEG00000015994	nom1	100	78.312	Amphiprion_percula
ENSSMAG00000011047	nom1	98	77.831	ENSATEG00000005405	nom1	100	78.225	Anabas_testudineus
ENSSMAG00000011047	nom1	78	58.027	ENSAPLG00000006585	NOM1	98	57.687	Anas_platyrhynchos
ENSSMAG00000011047	nom1	78	56.122	ENSACAG00000011192	NOM1	88	56.069	Anolis_carolinensis
ENSSMAG00000011047	nom1	98	76.867	ENSACLG00000000033	nom1	100	76.297	Astatotilapia_calliptera
ENSSMAG00000011047	nom1	62	75.094	ENSAMXG00000041486	nom1	98	58.864	Astyanax_mexicanus
ENSSMAG00000011047	nom1	98	52.218	ENSBTAG00000016435	NOM1	95	51.971	Bos_taurus
ENSSMAG00000011047	nom1	98	52.778	ENSCJAG00000004336	NOM1	95	53.434	Callithrix_jacchus
ENSSMAG00000011047	nom1	98	52.037	ENSCAFG00020005121	NOM1	96	51.168	Canis_lupus_dingo
ENSSMAG00000011047	nom1	81	58.129	ENSCHIG00000020102	NOM1	95	51.777	Capra_hircus
ENSSMAG00000011047	nom1	97	54.384	ENSTSYG00000000227	NOM1	95	54.022	Carlito_syrichta
ENSSMAG00000011047	nom1	61	69.674	ENSCAPG00000016273	NOM1	99	69.674	Cavia_aperea
ENSSMAG00000011047	nom1	98	51.458	ENSCPOG00000025538	NOM1	96	51.297	Cavia_porcellus
ENSSMAG00000011047	nom1	89	70.380	ENSCCAG00000014944	NOM1	100	67.877	Cebus_capucinus
ENSSMAG00000011047	nom1	81	57.864	ENSCLAG00000000267	NOM1	85	56.300	Chinchilla_lanigera
ENSSMAG00000011047	nom1	66	70.726	ENSCPBG00000018215	NOM1	88	52.878	Chrysemys_picta_bellii
ENSSMAG00000011047	nom1	85	37.426	ENSCING00000005248	-	97	36.951	Ciona_intestinalis
ENSSMAG00000011047	nom1	63	67.537	ENSCANG00000041984	NOM1	92	67.537	Colobus_angolensis_palliatus
ENSSMAG00000011047	nom1	81	57.001	ENSCGRG00001020293	Nom1	96	52.632	Cricetulus_griseus_chok1gshd
ENSSMAG00000011047	nom1	61	67.245	ENSCGRG00000005405	Nom1	97	67.245	Cricetulus_griseus_crigri
ENSSMAG00000011047	nom1	99	69.075	ENSCSEG00000000932	nom1	96	69.939	Cynoglossus_semilaevis
ENSSMAG00000011047	nom1	98	71.801	ENSCVAG00000007562	nom1	99	71.412	Cyprinodon_variegatus
ENSSMAG00000011047	nom1	100	62.850	ENSDARG00000060027	nom1	100	76.386	Danio_rerio
ENSSMAG00000011047	nom1	61	56.274	ENSDORG00000015682	Nom1	99	50.284	Dipodomys_ordii
ENSSMAG00000011047	nom1	62	37.773	FBgn0035336	CG9004	77	34.388	Drosophila_melanogaster
ENSSMAG00000011047	nom1	73	57.583	ENSETEG00000003104	NOM1	88	57.583	Echinops_telfairi
ENSSMAG00000011047	nom1	51	52.164	ENSEBUG00000010077	nom1	96	52.164	Eptatretus_burgeri
ENSSMAG00000011047	nom1	81	60.029	ENSEASG00005001489	NOM1	96	54.064	Equus_asinus_asinus
ENSSMAG00000011047	nom1	65	66.065	ENSECAG00000007596	NOM1	90	54.181	Equus_caballus
ENSSMAG00000011047	nom1	63	81.015	ENSELUG00000006266	nom1	98	67.494	Esox_lucius
ENSSMAG00000011047	nom1	81	59.078	ENSFCAG00000006467	NOM1	96	53.025	Felis_catus
ENSSMAG00000011047	nom1	80	58.345	ENSFALG00000006904	NOM1	99	56.612	Ficedula_albicollis
ENSSMAG00000011047	nom1	99	52.015	ENSFDAG00000016241	NOM1	98	50.520	Fukomys_damarensis
ENSSMAG00000011047	nom1	98	72.509	ENSFHEG00000015974	nom1	99	72.813	Fundulus_heteroclitus
ENSSMAG00000011047	nom1	94	61.519	ENSGMOG00000005129	nom1	100	61.146	Gadus_morhua
ENSSMAG00000011047	nom1	86	55.646	ENSGALG00000006437	NOM1	80	55.102	Gallus_gallus
ENSSMAG00000011047	nom1	98	72.879	ENSGAFG00000003211	nom1	99	72.515	Gambusia_affinis
ENSSMAG00000011047	nom1	82	58.757	ENSGAGG00000014347	NOM1	87	56.971	Gopherus_agassizii
ENSSMAG00000011047	nom1	65	66.968	ENSGGOG00000010920	NOM1	88	53.964	Gorilla_gorilla
ENSSMAG00000011047	nom1	98	76.840	ENSHBUG00000014616	nom1	100	75.797	Haplochromis_burtoni
ENSSMAG00000011047	nom1	98	54.064	ENSHGLG00000007392	NOM1	97	52.824	Heterocephalus_glaber_female
ENSSMAG00000011047	nom1	84	70.000	ENSHGLG00100014407	NOM1	96	68.153	Heterocephalus_glaber_male
ENSSMAG00000011047	nom1	62	72.348	ENSIPUG00000013980	nom1	98	60.744	Ictalurus_punctatus
ENSSMAG00000011047	nom1	63	67.669	ENSSTOG00000031736	NOM1	93	67.669	Ictidomys_tridecemlineatus
ENSSMAG00000011047	nom1	58	69.405	ENSJJAG00000011716	Nom1	98	69.405	Jaculus_jaculus
ENSSMAG00000011047	nom1	98	74.061	ENSLBEG00000009252	nom1	100	74.453	Labrus_bergylta
ENSSMAG00000011047	nom1	85	61.264	ENSLACG00000011777	NOM1	98	55.991	Latimeria_chalumnae
ENSSMAG00000011047	nom1	98	62.827	ENSLOCG00000012452	nom1	100	62.069	Lepisosteus_oculatus
ENSSMAG00000011047	nom1	98	48.391	ENSLAFG00000007119	NOM1	98	49.644	Loxodonta_africana
ENSSMAG00000011047	nom1	98	51.628	ENSMMUG00000039033	NOM1	95	52.706	Macaca_mulatta
ENSSMAG00000011047	nom1	62	69.202	ENSMLEG00000037062	NOM1	99	69.202	Mandrillus_leucophaeus
ENSSMAG00000011047	nom1	98	76.429	ENSMAMG00000004118	nom1	100	76.140	Mastacembelus_armatus
ENSSMAG00000011047	nom1	98	76.747	ENSMZEG00005000384	nom1	100	76.179	Maylandia_zebra
ENSSMAG00000011047	nom1	82	57.244	ENSMGAG00000005051	NOM1	99	55.895	Meleagris_gallopavo
ENSSMAG00000011047	nom1	98	52.986	ENSMAUG00000017988	Nom1	95	52.375	Mesocricetus_auratus
ENSSMAG00000011047	nom1	62	66.541	ENSMICG00000017531	NOM1	96	53.735	Microcebus_murinus
ENSSMAG00000011047	nom1	98	52.971	ENSMOCG00000015962	Nom1	95	53.239	Microtus_ochrogaster
ENSSMAG00000011047	nom1	98	73.548	ENSMMOG00000004419	nom1	99	70.964	Mola_mola
ENSSMAG00000011047	nom1	63	69.944	ENSMODG00000005177	NOM1	98	54.257	Monodelphis_domestica
ENSSMAG00000011047	nom1	98	75.938	ENSMALG00000008800	nom1	99	73.956	Monopterus_albus
ENSSMAG00000011047	nom1	98	52.086	MGP_CAROLIEiJ_G0027043	Nom1	94	52.106	Mus_caroli
ENSSMAG00000011047	nom1	98	52.324	ENSMUSG00000001569	Nom1	94	52.347	Mus_musculus
ENSSMAG00000011047	nom1	98	52.189	MGP_SPRETEiJ_G0028039	Nom1	94	52.148	Mus_spretus
ENSSMAG00000011047	nom1	81	55.908	ENSMPUG00000009745	NOM1	99	56.776	Mustela_putorius_furo
ENSSMAG00000011047	nom1	69	62.353	ENSMLUG00000009129	NOM1	91	65.399	Myotis_lucifugus
ENSSMAG00000011047	nom1	98	76.471	ENSNBRG00000016429	nom1	95	87.335	Neolamprologus_brichardi
ENSSMAG00000011047	nom1	98	53.052	ENSNLEG00000000238	NOM1	95	53.357	Nomascus_leucogenys
ENSSMAG00000011047	nom1	67	57.210	ENSMEUG00000001108	NOM1	75	54.978	Notamacropus_eugenii
ENSSMAG00000011047	nom1	52	57.667	ENSOPRG00000014676	NOM1	73	65.909	Ochotona_princeps
ENSSMAG00000011047	nom1	81	57.781	ENSODEG00000009399	NOM1	98	58.023	Octodon_degus
ENSSMAG00000011047	nom1	94	76.779	ENSONIG00000005958	nom1	100	77.792	Oreochromis_niloticus
ENSSMAG00000011047	nom1	53	70.913	ENSOANG00000006139	-	97	68.898	Ornithorhynchus_anatinus
ENSSMAG00000011047	nom1	96	45.953	ENSOCUG00000021448	-	92	52.783	Oryctolagus_cuniculus
ENSSMAG00000011047	nom1	98	55.095	ENSOCUG00000004071	-	95	54.309	Oryctolagus_cuniculus
ENSSMAG00000011047	nom1	100	70.979	ENSORLG00000010541	nom1	100	71.529	Oryzias_latipes
ENSSMAG00000011047	nom1	93	71.859	ENSORLG00020010789	nom1	99	72.506	Oryzias_latipes_hni
ENSSMAG00000011047	nom1	100	70.740	ENSORLG00015010475	nom1	100	71.479	Oryzias_latipes_hsok
ENSSMAG00000011047	nom1	100	72.047	ENSOMEG00000004219	nom1	100	72.588	Oryzias_melastigma
ENSSMAG00000011047	nom1	69	63.265	ENSOGAG00000001124	NOM1	90	66.000	Otolemur_garnettii
ENSSMAG00000011047	nom1	81	57.986	ENSOARG00000007261	NOM1	98	55.511	Ovis_aries
ENSSMAG00000011047	nom1	81	60.429	ENSPPAG00000041374	NOM1	95	53.450	Pan_paniscus
ENSSMAG00000011047	nom1	81	58.537	ENSPTIG00000013532	NOM1	95	58.840	Panthera_tigris_altaica
ENSSMAG00000011047	nom1	81	59.433	ENSPTRG00000019917	NOM1	95	53.567	Pan_troglodytes
ENSSMAG00000011047	nom1	98	54.152	ENSPANG00000007605	NOM1	95	54.953	Papio_anubis
ENSSMAG00000011047	nom1	100	59.552	ENSPKIG00000005825	nom1	100	59.102	Paramormyrops_kingsleyae
ENSSMAG00000011047	nom1	63	67.347	ENSPSIG00000017848	NOM1	89	67.347	Pelodiscus_sinensis
ENSSMAG00000011047	nom1	98	71.924	ENSPMGG00000002577	nom1	100	71.714	Periophthalmus_magnuspinnatus
ENSSMAG00000011047	nom1	98	53.612	ENSPEMG00000024180	Nom1	95	53.191	Peromyscus_maniculatus_bairdii
ENSSMAG00000011047	nom1	98	53.440	ENSPCIG00000027941	NOM1	95	54.296	Phascolarctos_cinereus
ENSSMAG00000011047	nom1	99	72.845	ENSPFOG00000015771	nom1	99	72.792	Poecilia_formosa
ENSSMAG00000011047	nom1	63	84.774	ENSPLAG00000007856	nom1	99	71.059	Poecilia_latipinna
ENSSMAG00000011047	nom1	99	72.963	ENSPMEG00000014155	nom1	99	72.909	Poecilia_mexicana
ENSSMAG00000011047	nom1	98	72.488	ENSPREG00000008850	nom1	99	72.609	Poecilia_reticulata
ENSSMAG00000011047	nom1	98	50.767	ENSPPYG00000018222	NOM1	95	51.122	Pongo_abelii
ENSSMAG00000011047	nom1	87	62.558	ENSPCAG00000000440	NOM1	84	62.558	Procavia_capensis
ENSSMAG00000011047	nom1	62	67.300	ENSPCOG00000015222	NOM1	99	67.300	Propithecus_coquereli
ENSSMAG00000011047	nom1	98	52.046	ENSPVAG00000014760	NOM1	95	51.402	Pteropus_vampyrus
ENSSMAG00000011047	nom1	98	76.506	ENSPNYG00000006975	nom1	98	85.240	Pundamilia_nyererei
ENSSMAG00000011047	nom1	66	71.942	ENSPNAG00000011085	nom1	98	58.656	Pygocentrus_nattereri
ENSSMAG00000011047	nom1	98	49.684	ENSRNOG00000048969	AABR07059041.1	99	50.120	Rattus_norvegicus
ENSSMAG00000011047	nom1	98	53.988	ENSRBIG00000037042	NOM1	96	54.759	Rhinopithecus_bieti
ENSSMAG00000011047	nom1	98	53.757	ENSRROG00000037293	NOM1	96	54.524	Rhinopithecus_roxellana
ENSSMAG00000011047	nom1	54	30.652	YLR336C	-	50	30.719	Saccharomyces_cerevisiae
ENSSMAG00000011047	nom1	65	68.535	ENSSHAG00000017998	-	99	59.497	Sarcophilus_harrisii
ENSSMAG00000011047	nom1	52	63.680	ENSSHAG00000002835	-	99	63.680	Sarcophilus_harrisii
ENSSMAG00000011047	nom1	58	73.457	ENSSFOG00015003196	nom1	100	73.457	Scleropages_formosus
ENSSMAG00000011047	nom1	98	82.091	ENSSDUG00000006834	nom1	100	82.290	Seriola_dumerili
ENSSMAG00000011047	nom1	98	82.048	ENSSLDG00000021812	nom1	100	82.130	Seriola_lalandi_dorsalis
ENSSMAG00000011047	nom1	89	47.315	ENSSPUG00000002556	NOM1	90	68.571	Sphenodon_punctatus
ENSSMAG00000011047	nom1	64	88.950	ENSSPAG00000000953	nom1	100	78.547	Stegastes_partitus
ENSSMAG00000011047	nom1	80	57.986	ENSTGUG00000000702	-	99	56.285	Taeniopygia_guttata
ENSSMAG00000011047	nom1	64	82.018	ENSTRUG00000010239	nom1	100	70.609	Takifugu_rubripes
ENSSMAG00000011047	nom1	98	68.916	ENSTNIG00000012783	nom1	100	69.250	Tetraodon_nigroviridis
ENSSMAG00000011047	nom1	80	58.671	ENSTTRG00000009691	NOM1	95	52.638	Tursiops_truncatus
ENSSMAG00000011047	nom1	81	58.381	ENSUAMG00000025450	NOM1	96	51.977	Ursus_americanus
ENSSMAG00000011047	nom1	81	58.501	ENSUMAG00000014275	NOM1	96	57.725	Ursus_maritimus
ENSSMAG00000011047	nom1	81	58.730	ENSVVUG00000002608	NOM1	96	52.241	Vulpes_vulpes
ENSSMAG00000011047	nom1	90	54.759	ENSXETG00000021611	nom1	82	74.146	Xenopus_tropicalis
ENSSMAG00000011047	nom1	100	73.294	ENSXMAG00000002451	nom1	99	73.703	Xiphophorus_maculatus