EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSSMAG00000011147 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Scophthalmus_maximus
Status: putative
Strand: Minus strand
Length: 10741 bases
Position: chr7:3159571-3170311
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSMAP00000018264	RRM_1	PF00076.22	1.1e-12	1	1
ENSSMAP00000018193	RRM_1	PF00076.22	1.5e-12	1	1
ENSSMAP00000018211	RRM_1	PF00076.22	1.5e-12	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSMAT00000018436	-	3129	-	ENSSMAP00000018211	326 (aa)	-	-
ENSSMAT00000018418	-	3428	-	ENSSMAP00000018193	323 (aa)	-	-
ENSSMAT00000018490	-	819	-	ENSSMAP00000018264	272 (aa)	-	-

Gene Model

Click here to download ENSSMAG00000011147's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSMAG00000011147's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSSMAG00000011147	-	99	51.579	ENSSMAG00000005608	-	79	53.138
ENSSMAG00000011147	-	78	84.038	ENSSMAG00000013592	-	95	68.121
ENSSMAG00000011147	-	92	46.875	ENSSMAG00000001107	raly	86	47.692
ENSSMAG00000011147	-	96	50.936	ENSSMAG00000015907	-	73	54.795

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSMAG00000011147	-	76	58.768	ENSG00000184672	RALYL	99	72.619	Homo_sapiens
ENSSMAG00000011147	-	90	81.673	ENSAPOG00000006963	hnrnpc	95	70.847	Acanthochromis_polyacanthus
ENSSMAG00000011147	-	99	86.716	ENSACIG00000016568	-	99	87.823	Amphilophus_citrinellus
ENSSMAG00000011147	-	99	76.015	ENSACIG00000000270	-	99	75.000	Amphilophus_citrinellus
ENSSMAG00000011147	-	96	87.138	ENSAOCG00000021616	-	100	86.154	Amphiprion_ocellaris
ENSSMAG00000011147	-	81	90.455	ENSAOCG00000003896	-	95	70.508	Amphiprion_ocellaris
ENSSMAG00000011147	-	81	90.455	ENSAPEG00000001489	-	95	70.508	Amphiprion_percula
ENSSMAG00000011147	-	99	80.135	ENSAPEG00000019962	-	99	81.145	Amphiprion_percula
ENSSMAG00000011147	-	100	88.957	ENSATEG00000018006	-	100	86.810	Anabas_testudineus
ENSSMAG00000011147	-	97	74.286	ENSATEG00000011734	-	99	73.651	Anabas_testudineus
ENSSMAG00000011147	-	99	47.586	ENSAPLG00000015574	RALYL	78	54.585	Anas_platyrhynchos
ENSSMAG00000011147	-	77	54.867	ENSACAG00000028464	RALYL	77	55.459	Anolis_carolinensis
ENSSMAG00000011147	-	99	50.735	ENSANAG00000023383	RALYL	76	55.656	Aotus_nancymaae
ENSSMAG00000011147	-	82	92.857	ENSACLG00000005707	-	88	90.114	Astatotilapia_calliptera
ENSSMAG00000011147	-	77	85.167	ENSACLG00000013636	-	86	78.626	Astatotilapia_calliptera
ENSSMAG00000011147	-	79	84.862	ENSACLG00000000995	-	81	84.862	Astatotilapia_calliptera
ENSSMAG00000011147	-	89	64.460	ENSAMXG00000042946	hnrnpc	98	75.393	Astyanax_mexicanus
ENSSMAG00000011147	-	79	85.648	ENSAMXG00000034915	zgc:55733	87	77.291	Astyanax_mexicanus
ENSSMAG00000011147	-	99	50.735	ENSCJAG00000000402	RALYL	76	55.656	Callithrix_jacchus
ENSSMAG00000011147	-	99	48.097	ENSCPOG00000012314	RALYL	77	54.825	Cavia_porcellus
ENSSMAG00000011147	-	99	50.735	ENSCCAG00000025003	RALYL	82	72.619	Cebus_capucinus
ENSSMAG00000011147	-	76	58.768	ENSCATG00000042145	RALYL	76	55.656	Cercocebus_atys
ENSSMAG00000011147	-	83	48.621	ENSCLAG00000005228	RALYL	77	54.825	Chinchilla_lanigera
ENSSMAG00000011147	-	77	53.982	ENSCHOG00000013228	RALYL	77	50.424	Choloepus_hoffmanni
ENSSMAG00000011147	-	99	50.735	ENSCANG00000039144	RALYL	76	55.656	Colobus_angolensis_palliatus
ENSSMAG00000011147	-	99	47.735	ENSCGRG00001009241	Ralyl	77	54.585	Cricetulus_griseus_chok1gshd
ENSSMAG00000011147	-	79	76.256	ENSCSEG00000019769	-	73	73.973	Cynoglossus_semilaevis
ENSSMAG00000011147	-	81	88.739	ENSCSEG00000021349	-	96	71.617	Cynoglossus_semilaevis
ENSSMAG00000011147	-	96	58.271	ENSCVAG00000002797	-	84	63.529	Cyprinodon_variegatus
ENSSMAG00000011147	-	81	90.498	ENSCVAG00000016981	-	80	89.695	Cyprinodon_variegatus
ENSSMAG00000011147	-	79	84.404	ENSDARG00000053810	hnrnpc	99	71.914	Danio_rerio
ENSSMAG00000011147	-	79	87.963	ENSDARG00000103845	zgc:55733	92	75.875	Danio_rerio
ENSSMAG00000011147	-	99	48.772	ENSDORG00000003721	Ralyl	77	55.022	Dipodomys_ordii
ENSSMAG00000011147	-	60	55.172	ENSETEG00000014028	RALYL	83	59.146	Echinops_telfairi
ENSSMAG00000011147	-	77	50.235	ENSEBUG00000006049	RALYL	74	46.919	Eptatretus_burgeri
ENSSMAG00000011147	-	94	43.284	ENSEBUG00000012363	hnrnpc	69	44.770	Eptatretus_burgeri
ENSSMAG00000011147	-	77	54.867	ENSEEUG00000007202	RALYL	78	54.825	Erinaceus_europaeus
ENSSMAG00000011147	-	82	81.857	ENSELUG00000007714	-	93	75.000	Esox_lucius
ENSSMAG00000011147	-	97	76.972	ENSELUG00000004132	-	100	73.651	Esox_lucius
ENSSMAG00000011147	-	77	58.140	ENSFALG00000008647	RALYL	99	55.856	Ficedula_albicollis
ENSSMAG00000011147	-	96	70.896	ENSFHEG00000003605	-	95	66.781	Fundulus_heteroclitus
ENSSMAG00000011147	-	81	85.232	ENSFHEG00000007278	-	99	66.769	Fundulus_heteroclitus
ENSSMAG00000011147	-	76	59.155	ENSGALG00000036938	RALYL	76	55.022	Gallus_gallus
ENSSMAG00000011147	-	99	81.884	ENSGAFG00000020992	-	99	83.696	Gambusia_affinis
ENSSMAG00000011147	-	96	70.741	ENSGAFG00000020486	-	99	68.382	Gambusia_affinis
ENSSMAG00000011147	-	100	79.580	ENSGACG00000017772	-	97	89.723	Gasterosteus_aculeatus
ENSSMAG00000011147	-	79	75.463	ENSGACG00000018932	-	86	68.981	Gasterosteus_aculeatus
ENSSMAG00000011147	-	76	58.768	ENSGGOG00000000841	RALYL	76	55.656	Gorilla_gorilla
ENSSMAG00000011147	-	77	85.646	ENSHBUG00000018342	-	99	66.181	Haplochromis_burtoni
ENSSMAG00000011147	-	100	85.627	ENSHBUG00000010527	-	100	85.015	Haplochromis_burtoni
ENSSMAG00000011147	-	83	47.931	ENSHGLG00000004866	RALYL	77	54.386	Heterocephalus_glaber_female
ENSSMAG00000011147	-	83	47.931	ENSHGLG00100017480	RALYL	77	54.386	Heterocephalus_glaber_male
ENSSMAG00000011147	-	79	89.381	ENSHCOG00000012333	hnrnpc	89	83.942	Hippocampus_comes
ENSSMAG00000011147	-	80	86.239	ENSIPUG00000008666	zgc:55733	95	80.645	Ictalurus_punctatus
ENSSMAG00000011147	-	90	77.236	ENSIPUG00000011271	hnrnpc	99	78.261	Ictalurus_punctatus
ENSSMAG00000011147	-	99	48.070	ENSSTOG00000012583	RALYL	78	54.585	Ictidomys_tridecemlineatus
ENSSMAG00000011147	-	97	71.481	ENSKMAG00000011170	-	83	76.136	Kryptolebias_marmoratus
ENSSMAG00000011147	-	79	92.130	ENSKMAG00000018265	-	81	88.213	Kryptolebias_marmoratus
ENSSMAG00000011147	-	96	72.830	ENSLBEG00000006979	-	99	64.605	Labrus_bergylta
ENSSMAG00000011147	-	100	86.154	ENSLBEG00000006193	-	100	85.538	Labrus_bergylta
ENSSMAG00000011147	-	98	68.459	ENSLBEG00000024418	-	99	61.056	Labrus_bergylta
ENSSMAG00000011147	-	81	72.388	ENSLOCG00000002560	hnrnpc	89	70.455	Lepisosteus_oculatus
ENSSMAG00000011147	-	76	58.768	ENSMNEG00000033288	RALYL	76	55.656	Macaca_nemestrina
ENSSMAG00000011147	-	76	58.768	ENSMLEG00000038284	RALYL	76	55.656	Mandrillus_leucophaeus
ENSSMAG00000011147	-	95	76.527	ENSMAMG00000012236	-	99	71.478	Mastacembelus_armatus
ENSSMAG00000011147	-	79	93.953	ENSMAMG00000008033	-	100	83.951	Mastacembelus_armatus
ENSSMAG00000011147	-	100	85.627	ENSMZEG00005024249	-	100	85.015	Maylandia_zebra
ENSSMAG00000011147	-	79	84.475	ENSMZEG00005020460	-	86	77.821	Maylandia_zebra
ENSSMAG00000011147	-	99	47.735	ENSMAUG00000015149	Ralyl	77	54.585	Mesocricetus_auratus
ENSSMAG00000011147	-	99	49.817	ENSMICG00000005558	RALYL	85	72.619	Microcebus_murinus
ENSSMAG00000011147	-	99	48.264	ENSMOCG00000017371	Ralyl	77	54.585	Microtus_ochrogaster
ENSSMAG00000011147	-	80	86.175	ENSMMOG00000021465	-	90	79.008	Mola_mola
ENSSMAG00000011147	-	100	83.456	ENSMMOG00000019520	-	100	83.824	Mola_mola
ENSSMAG00000011147	-	92	80.400	ENSMALG00000014623	-	82	86.692	Monopterus_albus
ENSSMAG00000011147	-	78	81.517	ENSMALG00000007520	-	83	71.146	Monopterus_albus
ENSSMAG00000011147	-	99	47.387	ENSMUSG00000039717	Ralyl	99	71.429	Mus_musculus
ENSSMAG00000011147	-	76	56.696	ENSMPUG00000010724	RALYL	77	53.712	Mustela_putorius_furo
ENSSMAG00000011147	-	99	48.421	ENSNGAG00000013375	Ralyl	77	54.585	Nannospalax_galili
ENSSMAG00000011147	-	100	85.933	ENSNBRG00000015676	-	100	85.933	Neolamprologus_brichardi
ENSSMAG00000011147	-	79	86.111	ENSNBRG00000004912	-	94	78.166	Neolamprologus_brichardi
ENSSMAG00000011147	-	77	58.216	ENSNLEG00000002702	RALYL	72	55.656	Nomascus_leucogenys
ENSSMAG00000011147	-	66	50.000	ENSOPRG00000013650	-	98	47.644	Ochotona_princeps
ENSSMAG00000011147	-	99	47.387	ENSODEG00000001012	RALYL	77	54.386	Octodon_degus
ENSSMAG00000011147	-	100	85.627	ENSONIG00000018350	-	100	85.627	Oreochromis_niloticus
ENSSMAG00000011147	-	82	85.088	ENSONIG00000007859	-	92	80.970	Oreochromis_niloticus
ENSSMAG00000011147	-	78	74.766	ENSORLG00000009999	-	96	59.933	Oryzias_latipes
ENSSMAG00000011147	-	96	86.792	ENSORLG00000003144	-	100	82.229	Oryzias_latipes
ENSSMAG00000011147	-	78	74.299	ENSORLG00020018228	hnrnpc	96	59.596	Oryzias_latipes_hni
ENSSMAG00000011147	-	96	88.125	ENSORLG00015009460	-	100	82.635	Oryzias_latipes_hsok
ENSSMAG00000011147	-	78	74.766	ENSORLG00015019755	-	96	59.933	Oryzias_latipes_hsok
ENSSMAG00000011147	-	96	89.068	ENSOMEG00000022665	-	100	84.308	Oryzias_melastigma
ENSSMAG00000011147	-	78	76.168	ENSOMEG00000020488	-	95	61.279	Oryzias_melastigma
ENSSMAG00000011147	-	76	58.768	ENSPPAG00000038705	RALYL	76	55.656	Pan_paniscus
ENSSMAG00000011147	-	76	60.748	ENSPPRG00000018612	RALYL	76	56.561	Panthera_pardus
ENSSMAG00000011147	-	76	60.748	ENSPTIG00000020331	RALYL	76	56.561	Panthera_tigris_altaica
ENSSMAG00000011147	-	76	58.768	ENSPTRG00000020381	RALYL	76	55.656	Pan_troglodytes
ENSSMAG00000011147	-	76	58.768	ENSPANG00000029305	RALYL	76	55.656	Papio_anubis
ENSSMAG00000011147	-	79	85.253	ENSPKIG00000022837	-	97	68.301	Paramormyrops_kingsleyae
ENSSMAG00000011147	-	93	76.953	ENSPKIG00000008592	-	100	74.085	Paramormyrops_kingsleyae
ENSSMAG00000011147	-	76	55.357	ENSPSIG00000011135	RALYL	76	54.585	Pelodiscus_sinensis
ENSSMAG00000011147	-	96	82.443	ENSPMGG00000013144	-	99	79.554	Periophthalmus_magnuspinnatus
ENSSMAG00000011147	-	79	76.744	ENSPMGG00000017774	-	96	59.167	Periophthalmus_magnuspinnatus
ENSSMAG00000011147	-	99	47.735	ENSPEMG00000016447	Ralyl	77	54.585	Peromyscus_maniculatus_bairdii
ENSSMAG00000011147	-	77	53.744	ENSPMAG00000002407	RALYL	99	51.948	Petromyzon_marinus
ENSSMAG00000011147	-	96	70.370	ENSPFOG00000001583	-	84	74.809	Poecilia_formosa
ENSSMAG00000011147	-	96	83.548	ENSPFOG00000002643	-	100	79.938	Poecilia_formosa
ENSSMAG00000011147	-	96	87.025	ENSPLAG00000000061	-	100	82.154	Poecilia_latipinna
ENSSMAG00000011147	-	96	70.260	ENSPLAG00000015305	-	84	73.180	Poecilia_latipinna
ENSSMAG00000011147	-	96	72.222	ENSPMEG00000004802	-	84	74.809	Poecilia_mexicana
ENSSMAG00000011147	-	96	82.903	ENSPMEG00000016524	-	100	79.630	Poecilia_mexicana
ENSSMAG00000011147	-	81	91.364	ENSPREG00000001852	-	87	89.695	Poecilia_reticulata
ENSSMAG00000011147	-	77	81.905	ENSPREG00000007928	-	84	74.046	Poecilia_reticulata
ENSSMAG00000011147	-	76	53.812	ENSPVAG00000010821	RALYL	80	52.500	Pteropus_vampyrus
ENSSMAG00000011147	-	78	84.834	ENSPNYG00000020293	-	86	79.688	Pundamilia_nyererei
ENSSMAG00000011147	-	100	81.250	ENSPNYG00000003747	-	97	82.292	Pundamilia_nyererei
ENSSMAG00000011147	-	79	82.870	ENSPNAG00000015686	hnrnpc	87	77.186	Pygocentrus_nattereri
ENSSMAG00000011147	-	93	70.261	ENSPNAG00000019200	zgc:55733	83	77.255	Pygocentrus_nattereri
ENSSMAG00000011147	-	76	58.768	ENSRROG00000023925	RALYL	87	70.930	Rhinopithecus_roxellana
ENSSMAG00000011147	-	96	77.947	ENSSFOG00015012015	-	100	75.092	Scleropages_formosus
ENSSMAG00000011147	-	79	85.909	ENSSFOG00015012924	-	81	97.500	Scleropages_formosus
ENSSMAG00000011147	-	100	87.037	ENSSDUG00000006730	-	100	86.111	Seriola_dumerili
ENSSMAG00000011147	-	96	75.472	ENSSDUG00000001723	-	77	94.558	Seriola_dumerili
ENSSMAG00000011147	-	82	89.888	ENSSLDG00000007474	-	90	87.786	Seriola_lalandi_dorsalis
ENSSMAG00000011147	-	96	75.849	ENSSLDG00000007454	-	84	80.916	Seriola_lalandi_dorsalis
ENSSMAG00000011147	-	71	71.845	ENSSARG00000002374	RALYL	77	46.154	Sorex_araneus
ENSSMAG00000011147	-	96	74.532	ENSSPAG00000023204	-	95	71.186	Stegastes_partitus
ENSSMAG00000011147	-	100	88.379	ENSSPAG00000013996	-	100	87.462	Stegastes_partitus
ENSSMAG00000011147	-	97	47.703	ENSTGUG00000011689	RALYL	81	53.361	Taeniopygia_guttata
ENSSMAG00000011147	-	79	85.185	ENSTRUG00000020158	-	97	66.441	Takifugu_rubripes
ENSSMAG00000011147	-	79	80.556	ENSTNIG00000000334	-	92	78.656	Tetraodon_nigroviridis
ENSSMAG00000011147	-	80	75.096	ENSTNIG00000007427	-	82	75.000	Tetraodon_nigroviridis
ENSSMAG00000011147	-	93	44.485	ENSTBEG00000005551	RALYL	88	48.472	Tupaia_belangeri
ENSSMAG00000011147	-	83	46.853	ENSTTRG00000015762	RALYL	76	52.915	Tursiops_truncatus
ENSSMAG00000011147	-	76	54.717	ENSVPAG00000008501	RALYL	76	51.818	Vicugna_pacos
ENSSMAG00000011147	-	97	63.971	ENSXCOG00000006552	-	80	68.775	Xiphophorus_couchianus
ENSSMAG00000011147	-	56	90.683	ENSXCOG00000019434	-	66	89.103	Xiphophorus_couchianus
ENSSMAG00000011147	-	96	69.776	ENSXMAG00000009333	-	95	65.646	Xiphophorus_maculatus
ENSSMAG00000011147	-	81	91.364	ENSXMAG00000022849	-	85	89.695	Xiphophorus_maculatus