EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSSMAG00000011169 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Scophthalmus_maximus
Status: putative
Strand: Minus strand
Length: 6100 bases
Position: chr8:20907001-20913100
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSMAP00000018278	RRM_1	PF00076.22	9.2e-17	1	1
ENSSMAP00000018271	RRM_1	PF00076.22	5.7e-16	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSMAT00000018497	-	543	-	ENSSMAP00000018271	180 (aa)	-	-
ENSSMAT00000018504	-	1309	-	ENSSMAP00000018278	260 (aa)	-	A0A2U9BQ29

Gene Model

Click here to download ENSSMAG00000011169's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSMAG00000011169's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSSMAG00000011169	-	100	55.721	ENSSMAG00000009283	alyref	100	50.530

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSMAG00000011169	-	100	75.000	ENSAPOG00000000183	-	100	71.538	Acanthochromis_polyacanthus
ENSSMAG00000011169	-	100	53.234	ENSACIG00000006351	alyref	97	51.625	Amphilophus_citrinellus
ENSSMAG00000011169	-	100	63.736	ENSACIG00000020351	-	100	61.993	Amphilophus_citrinellus
ENSSMAG00000011169	-	100	54.774	ENSAOCG00000014012	alyref	100	50.534	Amphiprion_ocellaris
ENSSMAG00000011169	-	100	73.077	ENSAOCG00000019305	-	100	70.769	Amphiprion_ocellaris
ENSSMAG00000011169	-	100	74.231	ENSAPEG00000013527	-	100	70.385	Amphiprion_percula
ENSSMAG00000011169	-	100	54.774	ENSAPEG00000014603	alyref	100	50.534	Amphiprion_percula
ENSSMAG00000011169	-	100	54.726	ENSATEG00000004307	alyref	100	50.352	Anabas_testudineus
ENSSMAG00000011169	-	100	74.717	ENSATEG00000000382	-	100	73.208	Anabas_testudineus
ENSSMAG00000011169	-	53	59.420	ENSAPLG00000014745	-	96	57.241	Anas_platyrhynchos
ENSSMAG00000011169	-	100	67.910	ENSACLG00000010184	-	100	66.045	Astatotilapia_calliptera
ENSSMAG00000011169	-	100	52.764	ENSACLG00000008432	alyref	100	49.823	Astatotilapia_calliptera
ENSSMAG00000011169	-	100	53.659	ENSAMXG00000007359	alyref	100	51.379	Astyanax_mexicanus
ENSSMAG00000011169	-	98	44.403	ENSCING00000013568	-	99	43.796	Ciona_intestinalis
ENSSMAG00000011169	-	92	48.588	ENSCSAVG00000003324	-	99	41.852	Ciona_savignyi
ENSSMAG00000011169	-	100	54.592	ENSCSEG00000017800	alyref	100	50.903	Cynoglossus_semilaevis
ENSSMAG00000011169	-	100	65.399	ENSCVAG00000007789	-	100	66.920	Cyprinodon_variegatus
ENSSMAG00000011169	-	100	56.566	ENSCVAG00000014869	alyref	100	51.601	Cyprinodon_variegatus
ENSSMAG00000011169	-	100	52.885	ENSDARG00000077732	alyref	100	50.342	Danio_rerio
ENSSMAG00000011169	-	97	42.857	FBgn0010774	Ref1	65	43.316	Drosophila_melanogaster
ENSSMAG00000011169	-	97	47.716	ENSEBUG00000008253	alyref	95	42.446	Eptatretus_burgeri
ENSSMAG00000011169	-	100	40.293	ENSEBUG00000006305	alyref	100	43.866	Eptatretus_burgeri
ENSSMAG00000011169	-	100	54.229	ENSELUG00000017178	alyref	100	50.704	Esox_lucius
ENSSMAG00000011169	-	100	59.341	ENSELUG00000008849	-	100	59.551	Esox_lucius
ENSSMAG00000011169	-	62	61.963	ENSFALG00000011923	-	97	59.763	Ficedula_albicollis
ENSSMAG00000011169	-	92	76.923	ENSFHEG00000004698	-	100	69.962	Fundulus_heteroclitus
ENSSMAG00000011169	-	100	55.000	ENSFHEG00000019426	alyref	100	52.297	Fundulus_heteroclitus
ENSSMAG00000011169	-	73	68.063	ENSGMOG00000013122	-	100	68.063	Gadus_morhua
ENSSMAG00000011169	-	100	57.143	ENSGMOG00000009882	alyref	100	50.362	Gadus_morhua
ENSSMAG00000011169	-	100	65.779	ENSGAFG00000007573	-	100	65.779	Gambusia_affinis
ENSSMAG00000011169	-	100	54.187	ENSGAFG00000006014	alyref	100	50.877	Gambusia_affinis
ENSSMAG00000011169	-	100	68.148	ENSHBUG00000001454	-	100	65.556	Haplochromis_burtoni
ENSSMAG00000011169	-	100	52.764	ENSHBUG00000020196	alyref	100	49.823	Haplochromis_burtoni
ENSSMAG00000011169	-	98	71.484	ENSHCOG00000012825	-	95	69.531	Hippocampus_comes
ENSSMAG00000011169	-	100	55.941	ENSIPUG00000009469	alyref	100	50.871	Ictalurus_punctatus
ENSSMAG00000011169	-	79	51.429	ENSSTOG00000016570	-	92	51.232	Ictidomys_tridecemlineatus
ENSSMAG00000011169	-	100	51.000	ENSKMAG00000008912	alyref	100	52.297	Kryptolebias_marmoratus
ENSSMAG00000011169	-	100	68.061	ENSKMAG00000006462	-	100	68.821	Kryptolebias_marmoratus
ENSSMAG00000011169	-	92	82.738	ENSLBEG00000005387	-	100	73.260	Labrus_bergylta
ENSSMAG00000011169	-	98	74.231	ENSLBEG00000012930	-	99	70.930	Labrus_bergylta
ENSSMAG00000011169	-	100	58.011	ENSLBEG00000023118	alyref	88	53.725	Labrus_bergylta
ENSSMAG00000011169	-	84	54.018	ENSLOCG00000013879	alyref	83	54.976	Lepisosteus_oculatus
ENSSMAG00000011169	-	100	55.556	ENSMAMG00000003034	alyref	100	53.047	Mastacembelus_armatus
ENSSMAG00000011169	-	100	76.628	ENSMAMG00000005464	-	100	75.479	Mastacembelus_armatus
ENSSMAG00000011169	-	100	67.164	ENSMZEG00005012096	-	100	65.672	Maylandia_zebra
ENSSMAG00000011169	-	100	52.764	ENSMZEG00005008639	alyref	100	49.823	Maylandia_zebra
ENSSMAG00000011169	-	100	53.266	ENSMMOG00000012458	alyref	96	50.909	Mola_mola
ENSSMAG00000011169	-	92	70.175	ENSMMOG00000007032	-	97	59.846	Mola_mola
ENSSMAG00000011169	-	100	77.778	ENSMALG00000006054	-	100	76.538	Monopterus_albus
ENSSMAG00000011169	-	100	48.980	ENSMLUG00000004098	-	100	48.551	Myotis_lucifugus
ENSSMAG00000011169	-	100	45.455	ENSMLUG00000014372	-	69	54.950	Myotis_lucifugus
ENSSMAG00000011169	-	100	47.887	ENSMLUG00000006521	-	100	46.975	Myotis_lucifugus
ENSSMAG00000011169	-	99	46.117	ENSMLUG00000022467	-	98	41.958	Myotis_lucifugus
ENSSMAG00000011169	-	97	44.949	ENSMLUG00000022178	-	98	41.844	Myotis_lucifugus
ENSSMAG00000011169	-	76	51.010	ENSMLUG00000030671	-	98	39.796	Myotis_lucifugus
ENSSMAG00000011169	-	97	49.733	ENSMLUG00000009247	-	98	41.877	Myotis_lucifugus
ENSSMAG00000011169	-	76	50.254	ENSMLUG00000028605	-	67	47.549	Myotis_lucifugus
ENSSMAG00000011169	-	100	52.222	ENSNGAG00000022014	-	100	49.621	Nannospalax_galili
ENSSMAG00000011169	-	100	67.910	ENSNBRG00000017460	-	100	66.045	Neolamprologus_brichardi
ENSSMAG00000011169	-	100	52.239	ENSNBRG00000001747	alyref	100	49.825	Neolamprologus_brichardi
ENSSMAG00000011169	-	100	69.549	ENSONIG00000003296	-	100	66.541	Oreochromis_niloticus
ENSSMAG00000011169	-	100	52.239	ENSONIG00000019434	alyref	100	50.699	Oreochromis_niloticus
ENSSMAG00000011169	-	96	73.563	ENSORLG00000001620	-	88	55.853	Oryzias_latipes
ENSSMAG00000011169	-	96	73.563	ENSORLG00020015673	-	100	68.966	Oryzias_latipes_hni
ENSSMAG00000011169	-	100	52.736	ENSORLG00020011942	alyref	100	50.530	Oryzias_latipes_hni
ENSSMAG00000011169	-	100	53.266	ENSORLG00015022664	alyref	100	50.890	Oryzias_latipes_hsok
ENSSMAG00000011169	-	100	69.847	ENSORLG00015015143	-	100	68.199	Oryzias_latipes_hsok
ENSSMAG00000011169	-	100	52.000	ENSOMEG00000019176	alyref	100	49.822	Oryzias_melastigma
ENSSMAG00000011169	-	92	73.810	ENSOMEG00000007158	-	99	61.686	Oryzias_melastigma
ENSSMAG00000011169	-	73	56.316	ENSPPAG00000036403	-	68	56.633	Pan_paniscus
ENSSMAG00000011169	-	100	57.754	ENSPKIG00000006233	-	79	54.406	Paramormyrops_kingsleyae
ENSSMAG00000011169	-	100	57.000	ENSPKIG00000007070	alyref	100	52.465	Paramormyrops_kingsleyae
ENSSMAG00000011169	-	100	58.376	ENSPMGG00000016600	alyref	90	53.309	Periophthalmus_magnuspinnatus
ENSSMAG00000011169	-	97	63.128	ENSPMGG00000012994	-	98	57.955	Periophthalmus_magnuspinnatus
ENSSMAG00000011169	-	100	55.000	ENSPEMG00000016628	-	100	51.515	Peromyscus_maniculatus_bairdii
ENSSMAG00000011169	-	100	54.902	ENSPFOG00000022825	alyref	99	52.982	Poecilia_formosa
ENSSMAG00000011169	-	100	65.909	ENSPFOG00000017094	-	100	67.424	Poecilia_formosa
ENSSMAG00000011169	-	100	55.665	ENSPLAG00000006948	alyref	100	53.169	Poecilia_latipinna
ENSSMAG00000011169	-	100	65.909	ENSPLAG00000014380	-	100	67.424	Poecilia_latipinna
ENSSMAG00000011169	-	100	54.902	ENSPMEG00000003547	alyref	100	52.982	Poecilia_mexicana
ENSSMAG00000011169	-	100	65.909	ENSPMEG00000023039	-	100	67.424	Poecilia_mexicana
ENSSMAG00000011169	-	100	55.172	ENSPREG00000015795	alyref	100	52.817	Poecilia_reticulata
ENSSMAG00000011169	-	100	65.152	ENSPREG00000003649	-	100	67.045	Poecilia_reticulata
ENSSMAG00000011169	-	100	52.764	ENSPNYG00000017498	alyref	100	49.823	Pundamilia_nyererei
ENSSMAG00000011169	-	98	66.031	ENSPNYG00000002879	-	97	63.218	Pundamilia_nyererei
ENSSMAG00000011169	-	100	54.229	ENSPNAG00000002531	alyref	100	50.877	Pygocentrus_nattereri
ENSSMAG00000011169	-	95	50.407	ENSSBOG00000030924	-	87	57.282	Saimiri_boliviensis_boliviensis
ENSSMAG00000011169	-	100	47.778	ENSSHAG00000000609	-	98	44.061	Sarcophilus_harrisii
ENSSMAG00000011169	-	100	46.154	ENSSHAG00000012866	-	100	42.125	Sarcophilus_harrisii
ENSSMAG00000011169	-	84	57.919	ENSSFOG00015003923	alyref	71	57.000	Scleropages_formosus
ENSSMAG00000011169	-	73	56.995	ENSSFOG00015003678	alyref	83	56.995	Scleropages_formosus
ENSSMAG00000011169	-	100	54.774	ENSSDUG00000016158	alyref	100	50.534	Seriola_dumerili
ENSSMAG00000011169	-	100	54.774	ENSSLDG00000017803	alyref	100	51.957	Seriola_lalandi_dorsalis
ENSSMAG00000011169	-	98	77.953	ENSSPAG00000017028	-	95	74.016	Stegastes_partitus
ENSSMAG00000011169	-	98	69.101	ENSTRUG00000003051	-	100	66.288	Takifugu_rubripes
ENSSMAG00000011169	-	100	64.504	ENSTNIG00000014136	-	100	61.303	Tetraodon_nigroviridis
ENSSMAG00000011169	-	100	56.906	ENSTNIG00000011595	alyref	100	47.842	Tetraodon_nigroviridis
ENSSMAG00000011169	-	76	58.376	ENSVVUG00000000272	-	82	58.500	Vulpes_vulpes
ENSSMAG00000011169	-	100	54.680	ENSXCOG00000018047	alyref	97	50.179	Xiphophorus_couchianus
ENSSMAG00000011169	-	100	55.172	ENSXMAG00000012218	alyref	97	50.538	Xiphophorus_maculatus
ENSSMAG00000011169	-	100	65.399	ENSXMAG00000018086	-	100	66.920	Xiphophorus_maculatus