EuRBPDB

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  • Description
  • RBDs
  • Transcripts
  • Gene Model
  • PPI
  • Orthologs
Description
Ensembl ID
ENSSMAG00000011267 (Gene tree)
Gene ID
-
Gene Symbol
lig4
Alias
zgc:165595
Full Name
ligase IV%2C DNA%2C ATP-dependent
Gene Type
protein_coding
Species
Scophthalmus_maximus
Status
putative
Strand
Plus strand
Length
8879 bases
Position
chr1:8372596-8381474
Accession
ZDB-GENE-070820-10
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
ENSSMAP00000018409RNA_ligasePF09414.101.8e-0911
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
ENSSMAT00000018636-6803-ENSSMAP00000018409888 (aa)-A0A2U9AW75
Gene Model
Click here to download ENSSMAG00000011267's gene model file
Protein-Protein Interaction (PPI)

Clik here to download ENSSMAG00000011267's network
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
ENSSMAG00000011267lig49964.230ENSG00000174405LIG410064.692Homo_sapiens
ENSSMAG00000011267lig410084.692ENSAPOG00000000866lig410084.692Acanthochromis_polyacanthus
ENSSMAG00000011267lig49962.611ENSAMEG00000019685LIG49962.611Ailuropoda_melanoleuca
ENSSMAG00000011267lig410084.505ENSACIG00000018309lig410084.505Amphilophus_citrinellus
ENSSMAG00000011267lig410084.912ENSAOCG00000011768lig410084.912Amphiprion_ocellaris
ENSSMAG00000011267lig410084.912ENSAPEG00000017815lig410084.912Amphiprion_percula
ENSSMAG00000011267lig410084.066ENSATEG00000005583lig410084.066Anabas_testudineus
ENSSMAG00000011267lig49663.813ENSAPLG00000001673LIG49963.813Anas_platyrhynchos
ENSSMAG00000011267lig49965.479ENSACAG00000014566LIG49965.479Anolis_carolinensis
ENSSMAG00000011267lig49963.344ENSANAG00000012446LIG49963.344Aotus_nancymaae
ENSSMAG00000011267lig410083.407ENSACLG00000027051lig410083.407Astatotilapia_calliptera
ENSSMAG00000011267lig410075.791ENSAMXG00000008192lig49575.791Astyanax_mexicanus
ENSSMAG00000011267lig49963.234ENSBTAG00000015868LIG49963.234Bos_taurus
ENSSMAG00000011267lig49962.791ENSCJAG00000014689LIG49962.791Callithrix_jacchus
ENSSMAG00000011267lig49962.791ENSCAFG00000006031LIG49962.791Canis_familiaris
ENSSMAG00000011267lig49962.791ENSCAFG00020021230LIG49962.791Canis_lupus_dingo
ENSSMAG00000011267lig49963.455ENSCHIG00000001019LIG49963.455Capra_hircus
ENSSMAG00000011267lig49962.237ENSCAPG00000006284LIG49962.237Cavia_aperea
ENSSMAG00000011267lig49962.126ENSCPOG00000014266LIG49962.126Cavia_porcellus
ENSSMAG00000011267lig49963.344ENSCCAG00000019971LIG49963.344Cebus_capucinus
ENSSMAG00000011267lig49963.476ENSCATG00000021075LIG49963.476Cercocebus_atys
ENSSMAG00000011267lig49962.583ENSCLAG00000003376LIG49962.583Chinchilla_lanigera
ENSSMAG00000011267lig49963.344ENSCSAG00000000211LIG49963.344Chlorocebus_sabaeus
ENSSMAG00000011267lig49966.371ENSCPBG00000023291LIG410065.755Chrysemys_picta_bellii
ENSSMAG00000011267lig47247.040ENSCING00000009536-9847.040Ciona_intestinalis
ENSSMAG00000011267lig48544.605ENSCSAVG00000010336-9844.605Ciona_savignyi
ENSSMAG00000011267lig49963.234ENSCANG00000005805LIG49963.234Colobus_angolensis_palliatus
ENSSMAG00000011267lig49962.721ENSCGRG00001012072Lig49962.721Cricetulus_griseus_chok1gshd
ENSSMAG00000011267lig49962.721ENSCGRG00000013417Lig49962.721Cricetulus_griseus_crigri
ENSSMAG00000011267lig49781.511ENSCSEG00000013905lig49681.511Cynoglossus_semilaevis
ENSSMAG00000011267lig410083.700ENSCVAG00000007896lig410083.700Cyprinodon_variegatus
ENSSMAG00000011267lig410074.697ENSDARG00000060620lig410074.697Danio_rerio
ENSSMAG00000011267lig49962.500ENSDNOG00000000513LIG49962.500Dasypus_novemcinctus
ENSSMAG00000011267lig49963.012ENSDORG00000027303Lig49963.012Dipodomys_ordii
ENSSMAG00000011267lig48531.360FBgn0030506Lig48531.360Drosophila_melanogaster
ENSSMAG00000011267lig49861.197ENSETEG00000015563LIG410061.419Echinops_telfairi
ENSSMAG00000011267lig49942.389ENSEBUG00000014243lig49942.389Eptatretus_burgeri
ENSSMAG00000011267lig49962.458ENSEASG00005022073LIG49962.458Equus_asinus_asinus
ENSSMAG00000011267lig49962.680ENSECAG00000003257LIG49962.680Equus_caballus
ENSSMAG00000011267lig49879.422ENSELUG00000006787lig49979.422Esox_lucius
ENSSMAG00000011267lig49963.012ENSFCAG00000031985LIG49963.012Felis_catus
ENSSMAG00000011267lig48768.442ENSFALG00000004214LIG49468.442Ficedula_albicollis
ENSSMAG00000011267lig49961.573ENSFDAG00000008973LIG49961.573Fukomys_damarensis
ENSSMAG00000011267lig410082.766ENSFHEG00000007398lig49182.766Fundulus_heteroclitus
ENSSMAG00000011267lig48577.207ENSGMOG00000012843lig49777.207Gadus_morhua
ENSSMAG00000011267lig410062.719ENSGALG00000016854LIG410062.719Gallus_gallus
ENSSMAG00000011267lig49981.818ENSGAFG00000019779lig49682.366Gambusia_affinis
ENSSMAG00000011267lig49979.691ENSGACG00000014135lig49979.691Gasterosteus_aculeatus
ENSSMAG00000011267lig49964.009ENSGGOG00000027771LIG49964.009Gorilla_gorilla
ENSSMAG00000011267lig410083.187ENSHBUG00000006245lig410083.187Haplochromis_burtoni
ENSSMAG00000011267lig49962.126ENSHGLG00000000718LIG49962.126Heterocephalus_glaber_female
ENSSMAG00000011267lig49962.126ENSHGLG00100003265LIG49962.126Heterocephalus_glaber_male
ENSSMAG00000011267lig410078.070ENSHCOG00000012010lig410078.070Hippocampus_comes
ENSSMAG00000011267lig410074.367ENSIPUG00000013748lig410074.367Ictalurus_punctatus
ENSSMAG00000011267lig49962.901ENSSTOG00000024303LIG49962.901Ictidomys_tridecemlineatus
ENSSMAG00000011267lig49962.680ENSJJAG00000006750Lig49962.680Jaculus_jaculus
ENSSMAG00000011267lig410080.088ENSKMAG00000001149lig410080.088Kryptolebias_marmoratus
ENSSMAG00000011267lig49183.797ENSLBEG00000014578lig410083.797Labrus_bergylta
ENSSMAG00000011267lig410065.351ENSLACG00000003282LIG410065.351Latimeria_chalumnae
ENSSMAG00000011267lig410070.646ENSLOCG00000008901lig49970.646Lepisosteus_oculatus
ENSSMAG00000011267lig49961.921ENSLAFG00000031152LIG49961.921Loxodonta_africana
ENSSMAG00000011267lig49963.455ENSMFAG00000037235LIG49963.455Macaca_fascicularis
ENSSMAG00000011267lig49963.344ENSMMUG00000008874LIG49963.344Macaca_mulatta
ENSSMAG00000011267lig49963.455ENSMNEG00000023575LIG49963.455Macaca_nemestrina
ENSSMAG00000011267lig49963.455ENSMLEG00000026720LIG49963.455Mandrillus_leucophaeus
ENSSMAG00000011267lig410084.835ENSMAMG00000008472lig49984.835Mastacembelus_armatus
ENSSMAG00000011267lig410083.297ENSMZEG00005001855lig410083.297Maylandia_zebra
ENSSMAG00000011267lig410062.829ENSMGAG00000015532LIG410062.829Meleagris_gallopavo
ENSSMAG00000011267lig49961.905ENSMOCG00000019000Lig49961.905Microtus_ochrogaster
ENSSMAG00000011267lig410082.527ENSMMOG00000004390lig410082.527Mola_mola
ENSSMAG00000011267lig49964.159ENSMODG00000025064LIG49964.159Monodelphis_domestica
ENSSMAG00000011267lig410084.176ENSMALG00000008555lig410084.176Monopterus_albus
ENSSMAG00000011267lig49962.569MGP_CAROLIEiJ_G0030809Lig49962.569Mus_caroli
ENSSMAG00000011267lig49962.348ENSMUSG00000049717Lig49962.348Mus_musculus
ENSSMAG00000011267lig49962.680MGP_PahariEiJ_G0021270Lig49962.680Mus_pahari
ENSSMAG00000011267lig49962.569MGP_SPRETEiJ_G0031917Lig49962.569Mus_spretus
ENSSMAG00000011267lig49962.942ENSMPUG00000018675LIG49962.942Mustela_putorius_furo
ENSSMAG00000011267lig49963.234ENSMLUG00000001267LIG49963.234Myotis_lucifugus
ENSSMAG00000011267lig49963.123ENSNGAG00000013258Lig49963.123Nannospalax_galili
ENSSMAG00000011267lig410083.297ENSNBRG00000021252lig410083.297Neolamprologus_brichardi
ENSSMAG00000011267lig49963.566ENSNLEG00000007888LIG49963.566Nomascus_leucogenys
ENSSMAG00000011267lig49961.794ENSOPRG00000005765LIG49961.794Ochotona_princeps
ENSSMAG00000011267lig49961.905ENSODEG00000019683LIG49961.905Octodon_degus
ENSSMAG00000011267lig410083.626ENSONIG00000011969lig49983.626Oreochromis_niloticus
ENSSMAG00000011267lig49962.680ENSOCUG00000015734LIG49962.680Oryctolagus_cuniculus
ENSSMAG00000011267lig49979.451ENSORLG00000004041lig49979.780Oryzias_latipes
ENSSMAG00000011267lig49979.560ENSORLG00020019607lig49979.890Oryzias_latipes_hni
ENSSMAG00000011267lig49979.451ENSORLG00015017754lig49979.780Oryzias_latipes_hsok
ENSSMAG00000011267lig47786.754ENSOMEG00000003459lig49986.754Oryzias_melastigma
ENSSMAG00000011267lig49863.193ENSOGAG00000032120LIG49963.193Otolemur_garnettii
ENSSMAG00000011267lig48368.521ENSOARG00000005590LIG49768.521Ovis_aries
ENSSMAG00000011267lig49963.787ENSPPAG00000032998LIG49963.787Pan_paniscus
ENSSMAG00000011267lig49963.455ENSPPRG00000017804LIG49963.455Panthera_pardus
ENSSMAG00000011267lig49963.344ENSPTIG00000010051LIG49963.344Panthera_tigris_altaica
ENSSMAG00000011267lig49963.898ENSPTRG00000006025LIG49963.898Pan_troglodytes
ENSSMAG00000011267lig49963.586ENSPANG00000007562LIG49963.586Papio_anubis
ENSSMAG00000011267lig410075.688ENSPKIG00000011645lig49975.688Paramormyrops_kingsleyae
ENSSMAG00000011267lig410066.009ENSPSIG00000001504LIG410066.009Pelodiscus_sinensis
ENSSMAG00000011267lig49876.906ENSPMGG00000013486lig410076.232Periophthalmus_magnuspinnatus
ENSSMAG00000011267lig49962.389ENSPEMG00000000076Lig49962.389Peromyscus_maniculatus_bairdii
ENSSMAG00000011267lig49963.385ENSPCIG00000021882LIG49963.385Phascolarctos_cinereus
ENSSMAG00000011267lig410082.785ENSPFOG00000000797lig410083.333Poecilia_formosa
ENSSMAG00000011267lig410082.675ENSPLAG00000001196lig410083.224Poecilia_latipinna
ENSSMAG00000011267lig410082.675ENSPMEG00000021353lig410083.224Poecilia_mexicana
ENSSMAG00000011267lig410082.346ENSPREG00000007323lig410082.895Poecilia_reticulata
ENSSMAG00000011267lig49963.344ENSPPYG00000005540LIG49963.344Pongo_abelii
ENSSMAG00000011267lig49962.237ENSPVAG00000016403LIG49962.237Pteropus_vampyrus
ENSSMAG00000011267lig410083.407ENSPNYG00000009660lig410083.407Pundamilia_nyererei
ENSSMAG00000011267lig49977.902ENSPNAG00000028069LIG49977.902Pygocentrus_nattereri
ENSSMAG00000011267lig49977.902ENSPNAG00000028056lig49977.902Pygocentrus_nattereri
ENSSMAG00000011267lig49962.458ENSRNOG00000014605Lig49962.458Rattus_norvegicus
ENSSMAG00000011267lig49962.791ENSRBIG00000039962LIG49962.791Rhinopithecus_bieti
ENSSMAG00000011267lig49963.344ENSRROG00000006040LIG49963.344Rhinopithecus_roxellana
ENSSMAG00000011267lig49962.901ENSSBOG00000019029LIG49962.901Saimiri_boliviensis_boliviensis
ENSSMAG00000011267lig49961.504ENSSHAG00000009525LIG49961.615Sarcophilus_harrisii
ENSSMAG00000011267lig410077.118ENSSFOG00015012835lig410077.118Scleropages_formosus
ENSSMAG00000011267lig410084.902ENSSDUG00000010343lig410084.902Seriola_dumerili
ENSSMAG00000011267lig410083.698ENSSLDG00000003239lig410083.698Seriola_lalandi_dorsalis
ENSSMAG00000011267lig49961.716ENSSARG00000006573LIG49961.716Sorex_araneus
ENSSMAG00000011267lig49265.952ENSSPUG00000002444LIG410065.952Sphenodon_punctatus
ENSSMAG00000011267lig410083.736ENSSPAG00000001609lig410083.736Stegastes_partitus
ENSSMAG00000011267lig49962.639ENSSSCG00000009540LIG49962.639Sus_scrofa
ENSSMAG00000011267lig49963.960ENSTGUG00000010795LIG49963.960Taeniopygia_guttata
ENSSMAG00000011267lig410081.648ENSTRUG00000009984lig410081.648Takifugu_rubripes
ENSSMAG00000011267lig410080.333ENSTNIG00000010348lig410080.556Tetraodon_nigroviridis
ENSSMAG00000011267lig49963.012ENSTBEG00000017741LIG49963.012Tupaia_belangeri
ENSSMAG00000011267lig49962.237ENSTTRG00000012660LIG49962.237Tursiops_truncatus
ENSSMAG00000011267lig49962.058ENSUAMG00000003773LIG49962.058Ursus_americanus
ENSSMAG00000011267lig410064.474ENSXETG00000002654lig410064.474Xenopus_tropicalis
ENSSMAG00000011267lig410082.675ENSXCOG00000017401lig410083.224Xiphophorus_couchianus
ENSSMAG00000011267lig410082.675ENSXMAG00000015142lig49983.224Xiphophorus_maculatus

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