EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSSMAG00000011280 (Gene tree)
Gene ID: -
Gene Symbol: ddx56
Alias: noh61|zgc:110078
Full Name: DEAD (Asp-Glu-Ala-Asp) box helicase 56
Gene Type: protein_coding
Species: Scophthalmus_maximus
Status: putative
Strand: Plus strand
Length: 10134 bases
Position: chr4:24810609-24820742
Accession: ZDB-GENE-040825-3
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSMAP00000018524	ResIII	PF04851.15	3.4e-07	1	1
ENSSMAP00000018478	ResIII	PF04851.15	3.6e-07	1	1
ENSSMAP00000018501	ResIII	PF04851.15	3.6e-07	1	1
ENSSMAP00000018566	ResIII	PF04851.15	7.9e-07	1	1
ENSSMAP00000018524	DEAD	PF00270.29	8.7e-40	1	1
ENSSMAP00000018478	DEAD	PF00270.29	9.5e-40	1	1
ENSSMAP00000018501	DEAD	PF00270.29	9.5e-40	1	1
ENSSMAP00000018566	DEAD	PF00270.29	5.2e-38	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSMAT00000018731	-	1738	-	ENSSMAP00000018501	563 (aa)	-	A0A2U9B9T9
ENSSMAT00000018707	-	1836	-	ENSSMAP00000018478	563 (aa)	-	A0A2U9B9T9
ENSSMAT00000018795	-	1701	-	ENSSMAP00000018566	566 (aa)	-	-
ENSSMAT00000018753	-	1780	-	ENSSMAP00000018524	542 (aa)	-	-

Gene Model

Click here to download ENSSMAG00000011280's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSMAG00000011280's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSSMAG00000011280	ddx56	75	31.773	ENSSMAG00000004179	ddx47	73	31.773
ENSSMAG00000011280	ddx56	75	30.993	ENSSMAG00000009788	ddx52	54	31.540

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSMAG00000011280	ddx56	98	64.493	ENSG00000136271	DDX56	98	68.508	Homo_sapiens
ENSSMAG00000011280	ddx56	99	91.231	ENSAPOG00000017113	ddx56	100	89.165	Acanthochromis_polyacanthus
ENSSMAG00000011280	ddx56	99	61.744	ENSAMEG00000017711	DDX56	99	62.679	Ailuropoda_melanoleuca
ENSSMAG00000011280	ddx56	99	75.556	ENSACIG00000013747	ddx56	99	86.413	Amphilophus_citrinellus
ENSSMAG00000011280	ddx56	90	91.581	ENSAOCG00000015447	-	87	91.581	Amphiprion_ocellaris
ENSSMAG00000011280	ddx56	92	91.800	ENSAOCG00000018059	ddx56	94	91.800	Amphiprion_ocellaris
ENSSMAG00000011280	ddx56	99	89.925	ENSAPEG00000007267	ddx56	100	88.099	Amphiprion_percula
ENSSMAG00000011280	ddx56	99	88.993	ENSATEG00000005279	ddx56	99	87.299	Anabas_testudineus
ENSSMAG00000011280	ddx56	99	86.007	ENSACLG00000020113	ddx56	100	84.547	Astatotilapia_calliptera
ENSSMAG00000011280	ddx56	99	78.108	ENSAMXG00000019357	ddx56	99	76.744	Astyanax_mexicanus
ENSSMAG00000011280	ddx56	98	65.399	ENSBTAG00000010602	DDX56	97	65.217	Bos_taurus
ENSSMAG00000011280	ddx56	97	40.675	WBGene00016073	C24H12.4	86	39.858	Caenorhabditis_elegans
ENSSMAG00000011280	ddx56	97	66.168	ENSCJAG00000012233	DDX56	99	64.337	Callithrix_jacchus
ENSSMAG00000011280	ddx56	76	65.301	ENSCAFG00000029295	DDX56	99	60.652	Canis_familiaris
ENSSMAG00000011280	ddx56	98	63.216	ENSCAFG00020019695	DDX56	93	66.468	Canis_lupus_dingo
ENSSMAG00000011280	ddx56	98	65.642	ENSCHIG00000014261	DDX56	97	65.217	Capra_hircus
ENSSMAG00000011280	ddx56	98	63.849	ENSTSYG00000008048	DDX56	99	63.978	Carlito_syrichta
ENSSMAG00000011280	ddx56	86	64.468	ENSCAPG00000006286	DDX56	98	61.368	Cavia_aperea
ENSSMAG00000011280	ddx56	99	65.746	ENSCPOG00000003359	DDX56	98	62.982	Cavia_porcellus
ENSSMAG00000011280	ddx56	98	63.489	ENSCCAG00000025303	DDX56	99	63.506	Cebus_capucinus
ENSSMAG00000011280	ddx56	98	64.130	ENSCATG00000039389	DDX56	97	63.949	Cercocebus_atys
ENSSMAG00000011280	ddx56	99	65.074	ENSCLAG00000007666	DDX56	99	62.456	Chinchilla_lanigera
ENSSMAG00000011280	ddx56	98	64.312	ENSCSAG00000015636	DDX56	97	64.312	Chlorocebus_sabaeus
ENSSMAG00000011280	ddx56	96	71.078	ENSCPBG00000024556	DDX56	99	68.861	Chrysemys_picta_bellii
ENSSMAG00000011280	ddx56	93	60.861	ENSCING00000005185	-	98	60.827	Ciona_intestinalis
ENSSMAG00000011280	ddx56	92	60.317	ENSCSAVG00000011266	-	99	60.400	Ciona_savignyi
ENSSMAG00000011280	ddx56	98	64.312	ENSCANG00000028187	DDX56	98	64.079	Colobus_angolensis_palliatus
ENSSMAG00000011280	ddx56	99	65.116	ENSCGRG00001019019	Ddx56	98	64.758	Cricetulus_griseus_chok1gshd
ENSSMAG00000011280	ddx56	99	65.116	ENSCGRG00000011870	Ddx56	98	64.758	Cricetulus_griseus_crigri
ENSSMAG00000011280	ddx56	100	84.397	ENSCSEG00000008368	ddx56	100	84.014	Cynoglossus_semilaevis
ENSSMAG00000011280	ddx56	99	84.888	ENSCVAG00000006499	ddx56	100	83.126	Cyprinodon_variegatus
ENSSMAG00000011280	ddx56	99	80.597	ENSDARG00000020913	ddx56	99	78.648	Danio_rerio
ENSSMAG00000011280	ddx56	86	61.807	ENSDNOG00000036526	DDX56	98	61.191	Dasypus_novemcinctus
ENSSMAG00000011280	ddx56	98	49.195	FBgn0001565	Hlc	90	51.362	Drosophila_melanogaster
ENSSMAG00000011280	ddx56	66	75.000	ENSETEG00000002969	-	64	75.000	Echinops_telfairi
ENSSMAG00000011280	ddx56	88	44.583	ENSETEG00000019559	-	99	44.375	Echinops_telfairi
ENSSMAG00000011280	ddx56	98	65.108	ENSEBUG00000009986	ddx56	99	65.468	Eptatretus_burgeri
ENSSMAG00000011280	ddx56	96	63.919	ENSEASG00005017795	DDX56	97	64.182	Equus_asinus_asinus
ENSSMAG00000011280	ddx56	96	63.736	ENSECAG00000019897	DDX56	97	64.000	Equus_caballus
ENSSMAG00000011280	ddx56	83	64.606	ENSEEUG00000004849	DDX56	96	62.791	Erinaceus_europaeus
ENSSMAG00000011280	ddx56	99	84.888	ENSELUG00000004150	ddx56	100	81.350	Esox_lucius
ENSSMAG00000011280	ddx56	94	66.796	ENSFCAG00000010261	DDX56	99	62.989	Felis_catus
ENSSMAG00000011280	ddx56	100	63.845	ENSFDAG00000007128	DDX56	99	62.218	Fukomys_damarensis
ENSSMAG00000011280	ddx56	100	80.496	ENSFHEG00000018008	ddx56	97	86.640	Fundulus_heteroclitus
ENSSMAG00000011280	ddx56	97	77.778	ENSGAFG00000006906	ddx56	93	81.437	Gambusia_affinis
ENSSMAG00000011280	ddx56	96	71.157	ENSGAGG00000006789	DDX56	89	72.299	Gopherus_agassizii
ENSSMAG00000011280	ddx56	98	64.493	ENSGGOG00000012031	DDX56	98	64.079	Gorilla_gorilla
ENSSMAG00000011280	ddx56	99	80.519	ENSHBUG00000015246	ddx56	97	80.334	Haplochromis_burtoni
ENSSMAG00000011280	ddx56	99	64.469	ENSHGLG00000017271	DDX56	99	62.257	Heterocephalus_glaber_female
ENSSMAG00000011280	ddx56	99	64.469	ENSHGLG00100015731	DDX56	99	62.257	Heterocephalus_glaber_male
ENSSMAG00000011280	ddx56	99	83.769	ENSHCOG00000001685	ddx56	99	81.720	Hippocampus_comes
ENSSMAG00000011280	ddx56	99	76.580	ENSIPUG00000006602	ddx56	98	75.492	Ictalurus_punctatus
ENSSMAG00000011280	ddx56	97	66.479	ENSSTOG00000000464	DDX56	99	63.214	Ictidomys_tridecemlineatus
ENSSMAG00000011280	ddx56	99	65.619	ENSJJAG00000014269	Ddx56	99	63.685	Jaculus_jaculus
ENSSMAG00000011280	ddx56	99	86.431	ENSKMAG00000016611	ddx56	99	84.464	Kryptolebias_marmoratus
ENSSMAG00000011280	ddx56	99	89.366	ENSLBEG00000026281	ddx56	100	88.014	Labrus_bergylta
ENSSMAG00000011280	ddx56	99	72.253	ENSLACG00000015551	DDX56	95	72.212	Latimeria_chalumnae
ENSSMAG00000011280	ddx56	99	78.957	ENSLOCG00000015185	ddx56	100	77.249	Lepisosteus_oculatus
ENSSMAG00000011280	ddx56	97	65.918	ENSLAFG00000018206	DDX56	98	64.452	Loxodonta_africana
ENSSMAG00000011280	ddx56	98	64.130	ENSMFAG00000041001	DDX56	97	63.949	Macaca_fascicularis
ENSSMAG00000011280	ddx56	98	64.130	ENSMMUG00000002645	DDX56	97	63.949	Macaca_mulatta
ENSSMAG00000011280	ddx56	98	64.130	ENSMNEG00000028492	DDX56	97	63.949	Macaca_nemestrina
ENSSMAG00000011280	ddx56	98	64.209	ENSMLEG00000043591	DDX56	97	63.949	Mandrillus_leucophaeus
ENSSMAG00000011280	ddx56	99	88.619	ENSMAMG00000007776	ddx56	100	87.211	Mastacembelus_armatus
ENSSMAG00000011280	ddx56	99	86.007	ENSMZEG00005009813	ddx56	100	84.547	Maylandia_zebra
ENSSMAG00000011280	ddx56	99	64.286	ENSMICG00000005550	DDX56	99	64.286	Microcebus_murinus
ENSSMAG00000011280	ddx56	99	63.148	ENSMOCG00000016782	Ddx56	98	62.791	Microtus_ochrogaster
ENSSMAG00000011280	ddx56	92	90.239	ENSMMOG00000009654	ddx56	95	90.438	Mola_mola
ENSSMAG00000011280	ddx56	98	59.712	ENSMODG00000016137	DDX56	97	58.781	Monodelphis_domestica
ENSSMAG00000011280	ddx56	70	80.208	ENSMALG00000016910	ddx56	99	80.789	Monopterus_albus
ENSSMAG00000011280	ddx56	99	63.685	MGP_CAROLIEiJ_G0016069	Ddx56	98	67.339	Mus_caroli
ENSSMAG00000011280	ddx56	99	64.057	ENSMUSG00000004393	Ddx56	98	67.742	Mus_musculus
ENSSMAG00000011280	ddx56	99	64.222	MGP_PahariEiJ_G0016822	Ddx56	98	67.339	Mus_pahari
ENSSMAG00000011280	ddx56	99	64.057	MGP_SPRETEiJ_G0016911	Ddx56	98	67.742	Mus_spretus
ENSSMAG00000011280	ddx56	97	65.478	ENSMPUG00000018196	DDX56	82	66.602	Mustela_putorius_furo
ENSSMAG00000011280	ddx56	98	63.653	ENSMLUG00000003509	DDX56	98	63.964	Myotis_lucifugus
ENSSMAG00000011280	ddx56	99	64.464	ENSNGAG00000018785	Ddx56	98	63.799	Nannospalax_galili
ENSSMAG00000011280	ddx56	99	80.334	ENSNBRG00000002656	ddx56	97	79.963	Neolamprologus_brichardi
ENSSMAG00000011280	ddx56	98	64.130	ENSNLEG00000003816	DDX56	98	63.718	Nomascus_leucogenys
ENSSMAG00000011280	ddx56	92	60.913	ENSMEUG00000006788	DDX56	100	60.913	Notamacropus_eugenii
ENSSMAG00000011280	ddx56	96	64.504	ENSOPRG00000000292	-	98	61.939	Ochotona_princeps
ENSSMAG00000011280	ddx56	70	66.580	ENSODEG00000014807	DDX56	100	66.057	Octodon_degus
ENSSMAG00000011280	ddx56	100	81.705	ENSONIG00000011509	ddx56	99	80.995	Oreochromis_niloticus
ENSSMAG00000011280	ddx56	96	55.839	ENSOANG00000006320	-	99	54.562	Ornithorhynchus_anatinus
ENSSMAG00000011280	ddx56	51	63.177	ENSOANG00000010592	-	99	63.177	Ornithorhynchus_anatinus
ENSSMAG00000011280	ddx56	75	56.341	ENSOANG00000015987	-	95	56.204	Ornithorhynchus_anatinus
ENSSMAG00000011280	ddx56	99	63.652	ENSOCUG00000022918	DDX56	99	63.766	Oryctolagus_cuniculus
ENSSMAG00000011280	ddx56	99	83.582	ENSORLG00000001434	ddx56	100	81.528	Oryzias_latipes
ENSSMAG00000011280	ddx56	99	83.209	ENSORLG00020015718	ddx56	97	81.172	Oryzias_latipes_hni
ENSSMAG00000011280	ddx56	99	83.582	ENSORLG00015003004	ddx56	95	81.932	Oryzias_latipes_hsok
ENSSMAG00000011280	ddx56	99	83.955	ENSOMEG00000022072	ddx56	99	81.883	Oryzias_melastigma
ENSSMAG00000011280	ddx56	97	65.047	ENSOGAG00000009981	DDX56	99	63.799	Otolemur_garnettii
ENSSMAG00000011280	ddx56	98	65.823	ENSOARG00000015240	DDX56	97	65.399	Ovis_aries
ENSSMAG00000011280	ddx56	97	53.818	ENSPPAG00000031263	-	98	52.321	Pan_paniscus
ENSSMAG00000011280	ddx56	98	61.854	ENSPPAG00000029147	DDX56	97	61.676	Pan_paniscus
ENSSMAG00000011280	ddx56	94	66.602	ENSPPRG00000014594	DDX56	99	62.411	Panthera_pardus
ENSSMAG00000011280	ddx56	80	65.138	ENSPTIG00000019500	DDX56	90	60.870	Panthera_tigris_altaica
ENSSMAG00000011280	ddx56	98	64.493	ENSPTRG00000019147	DDX56	98	64.079	Pan_troglodytes
ENSSMAG00000011280	ddx56	93	51.796	ENSPTRG00000052765	-	98	52.166	Pan_troglodytes
ENSSMAG00000011280	ddx56	98	63.949	ENSPANG00000002446	DDX56	97	63.768	Papio_anubis
ENSSMAG00000011280	ddx56	99	79.664	ENSPKIG00000018998	ddx56	99	77.143	Paramormyrops_kingsleyae
ENSSMAG00000011280	ddx56	99	85.130	ENSPMGG00000017421	ddx56	99	84.572	Periophthalmus_magnuspinnatus
ENSSMAG00000011280	ddx56	98	66.365	ENSPCIG00000009336	DDX56	97	66.184	Phascolarctos_cinereus
ENSSMAG00000011280	ddx56	99	84.888	ENSPFOG00000018658	ddx56	100	82.948	Poecilia_formosa
ENSSMAG00000011280	ddx56	99	85.075	ENSPLAG00000019208	ddx56	100	83.126	Poecilia_latipinna
ENSSMAG00000011280	ddx56	99	85.075	ENSPMEG00000001775	ddx56	100	82.948	Poecilia_mexicana
ENSSMAG00000011280	ddx56	99	84.888	ENSPREG00000015142	ddx56	100	82.948	Poecilia_reticulata
ENSSMAG00000011280	ddx56	98	64.493	ENSPPYG00000017591	DDX56	98	64.079	Pongo_abelii
ENSSMAG00000011280	ddx56	94	65.825	ENSPCAG00000011499	DDX56	98	64.312	Procavia_capensis
ENSSMAG00000011280	ddx56	97	66.168	ENSPCOG00000024864	DDX56	99	64.337	Propithecus_coquereli
ENSSMAG00000011280	ddx56	87	69.302	ENSPVAG00000000791	DDX56	87	69.302	Pteropus_vampyrus
ENSSMAG00000011280	ddx56	99	85.821	ENSPNYG00000019212	ddx56	100	84.369	Pundamilia_nyererei
ENSSMAG00000011280	ddx56	99	80.000	ENSPNAG00000025446	ddx56	99	79.053	Pygocentrus_nattereri
ENSSMAG00000011280	ddx56	99	64.057	ENSRNOG00000004670	Ddx56	98	63.345	Rattus_norvegicus
ENSSMAG00000011280	ddx56	98	64.312	ENSRBIG00000030140	DDX56	98	64.079	Rhinopithecus_bieti
ENSSMAG00000011280	ddx56	98	64.130	ENSRROG00000044428	DDX56	98	63.899	Rhinopithecus_roxellana
ENSSMAG00000011280	ddx56	97	44.048	YLR276C	-	91	45.173	Saccharomyces_cerevisiae
ENSSMAG00000011280	ddx56	97	65.607	ENSSBOG00000034339	DDX56	99	63.799	Saimiri_boliviensis_boliviensis
ENSSMAG00000011280	ddx56	86	65.092	ENSSHAG00000016615	DDX56	98	64.948	Sarcophilus_harrisii
ENSSMAG00000011280	ddx56	99	78.731	ENSSFOG00015012795	ddx56	98	77.518	Scleropages_formosus
ENSSMAG00000011280	ddx56	99	92.164	ENSSDUG00000023597	ddx56	100	90.586	Seriola_dumerili
ENSSMAG00000011280	ddx56	99	91.604	ENSSLDG00000018369	ddx56	100	90.053	Seriola_lalandi_dorsalis
ENSSMAG00000011280	ddx56	72	74.576	ENSSARG00000014363	DDX56	78	70.000	Sorex_araneus
ENSSMAG00000011280	ddx56	96	72.989	ENSSPUG00000000784	DDX56	95	70.217	Sphenodon_punctatus
ENSSMAG00000011280	ddx56	100	90.037	ENSSPAG00000009392	ddx56	99	90.299	Stegastes_partitus
ENSSMAG00000011280	ddx56	99	64.684	ENSSSCG00000016745	DDX56	98	63.949	Sus_scrofa
ENSSMAG00000011280	ddx56	99	87.570	ENSTRUG00000018623	ddx56	100	85.009	Takifugu_rubripes
ENSSMAG00000011280	ddx56	99	86.900	ENSTNIG00000013593	ddx56	99	84.099	Tetraodon_nigroviridis
ENSSMAG00000011280	ddx56	99	64.043	ENSTBEG00000007119	DDX56	98	64.043	Tupaia_belangeri
ENSSMAG00000011280	ddx56	86	61.066	ENSTTRG00000010552	DDX56	98	62.680	Tursiops_truncatus
ENSSMAG00000011280	ddx56	99	62.100	ENSUAMG00000014194	DDX56	99	62.857	Ursus_americanus
ENSSMAG00000011280	ddx56	99	62.100	ENSUMAG00000009666	DDX56	99	62.857	Ursus_maritimus
ENSSMAG00000011280	ddx56	94	66.214	ENSVVUG00000011905	DDX56	99	61.388	Vulpes_vulpes
ENSSMAG00000011280	ddx56	98	70.811	ENSXETG00000019000	ddx56	99	70.886	Xenopus_tropicalis
ENSSMAG00000011280	ddx56	99	78.712	ENSXCOG00000017413	ddx56	99	78.660	Xiphophorus_couchianus
ENSSMAG00000011280	ddx56	99	85.075	ENSXMAG00000018749	ddx56	100	83.304	Xiphophorus_maculatus