EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSSMAG00000011672 (Gene tree)
Gene ID: -
Gene Symbol: polr1e
Alias: zgc:112501
Full Name: RNA polymerase I subunit E
Gene Type: protein_coding
Species: Scophthalmus_maximus
Status: putative
Strand: Plus strand
Length: 4700 bases
Position: chr8:11658803-11663502
Accession: ZDB-GENE-050522-251
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSMAP00000019067	RNA_pol_I_A49	PF06870.12	1.9e-112	1	1
ENSSMAP00000019041	RNA_pol_I_A49	PF06870.12	2.9e-112	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSMAT00000019278	-	1542	-	ENSSMAP00000019041	513 (aa)	-	-
ENSSMAT00000019305	-	2376	-	ENSSMAP00000019067	447 (aa)	-	-

Gene Model

Click here to download ENSSMAG00000011672's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSMAG00000011672's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSMAG00000011672	polr1e	93	45.476	ENSG00000137054	POLR1E	99	45.476	Homo_sapiens
ENSSMAG00000011672	polr1e	93	73.735	ENSAPOG00000012452	polr1e	99	73.735	Acanthochromis_polyacanthus
ENSSMAG00000011672	polr1e	91	43.172	ENSAMEG00000010193	POLR1E	94	43.172	Ailuropoda_melanoleuca
ENSSMAG00000011672	polr1e	93	69.784	ENSACIG00000009884	polr1e	99	74.425	Amphilophus_citrinellus
ENSSMAG00000011672	polr1e	93	80.241	ENSAOCG00000005665	polr1e	99	80.241	Amphiprion_ocellaris
ENSSMAG00000011672	polr1e	93	80.723	ENSAPEG00000020581	polr1e	99	80.723	Amphiprion_percula
ENSSMAG00000011672	polr1e	93	81.928	ENSATEG00000020609	polr1e	99	81.928	Anabas_testudineus
ENSSMAG00000011672	polr1e	75	39.426	ENSAPLG00000010340	POLR1E	99	39.164	Anas_platyrhynchos
ENSSMAG00000011672	polr1e	93	45.714	ENSANAG00000038046	POLR1E	99	45.714	Aotus_nancymaae
ENSSMAG00000011672	polr1e	94	77.088	ENSACLG00000013685	polr1e	99	77.088	Astatotilapia_calliptera
ENSSMAG00000011672	polr1e	93	56.763	ENSAMXG00000018181	polr1e	99	56.763	Astyanax_mexicanus
ENSSMAG00000011672	polr1e	94	47.506	ENSBTAG00000012243	POLR1E	99	47.506	Bos_taurus
ENSSMAG00000011672	polr1e	87	46.329	ENSCJAG00000010512	POLR1E	94	48.021	Callithrix_jacchus
ENSSMAG00000011672	polr1e	91	46.569	ENSCAFG00000002377	POLR1E	97	46.569	Canis_familiaris
ENSSMAG00000011672	polr1e	91	46.569	ENSCAFG00020017851	POLR1E	97	46.569	Canis_lupus_dingo
ENSSMAG00000011672	polr1e	94	47.045	ENSCHIG00000019479	POLR1E	99	47.045	Capra_hircus
ENSSMAG00000011672	polr1e	94	46.318	ENSTSYG00000002075	POLR1E	99	46.318	Carlito_syrichta
ENSSMAG00000011672	polr1e	65	43.243	ENSCAPG00000015653	POLR1E	99	43.243	Cavia_aperea
ENSSMAG00000011672	polr1e	94	46.370	ENSCPOG00000009965	POLR1E	100	46.370	Cavia_porcellus
ENSSMAG00000011672	polr1e	96	39.627	ENSCCAG00000029460	POLR1E	99	41.050	Cebus_capucinus
ENSSMAG00000011672	polr1e	93	45.476	ENSCATG00000031732	POLR1E	99	46.667	Cercocebus_atys
ENSSMAG00000011672	polr1e	81	49.591	ENSCLAG00000012701	POLR1E	96	49.727	Chinchilla_lanigera
ENSSMAG00000011672	polr1e	93	45.476	ENSCSAG00000010782	POLR1E	99	45.476	Chlorocebus_sabaeus
ENSSMAG00000011672	polr1e	88	40.152	ENSCHOG00000013024	POLR1E	82	40.152	Choloepus_hoffmanni
ENSSMAG00000011672	polr1e	93	47.733	ENSCPBG00000006923	POLR1E	99	47.971	Chrysemys_picta_bellii
ENSSMAG00000011672	polr1e	93	45.952	ENSCANG00000036112	POLR1E	99	47.407	Colobus_angolensis_palliatus
ENSSMAG00000011672	polr1e	94	46.099	ENSCGRG00001006197	Polr1e	97	46.099	Cricetulus_griseus_chok1gshd
ENSSMAG00000011672	polr1e	94	45.626	ENSCGRG00000006430	Polr1e	97	45.626	Cricetulus_griseus_crigri
ENSSMAG00000011672	polr1e	93	71.014	ENSCSEG00000005121	polr1e	99	71.014	Cynoglossus_semilaevis
ENSSMAG00000011672	polr1e	93	75.604	ENSCVAG00000019759	polr1e	99	75.604	Cyprinodon_variegatus
ENSSMAG00000011672	polr1e	90	57.816	ENSDARG00000006434	polr1e	99	57.971	Danio_rerio
ENSSMAG00000011672	polr1e	91	42.451	ENSDNOG00000010257	POLR1E	97	42.451	Dasypus_novemcinctus
ENSSMAG00000011672	polr1e	79	43.733	ENSETEG00000018204	POLR1E	99	44.011	Echinops_telfairi
ENSSMAG00000011672	polr1e	91	46.814	ENSEASG00005000675	POLR1E	97	46.814	Equus_asinus_asinus
ENSSMAG00000011672	polr1e	91	46.814	ENSECAG00000014669	POLR1E	97	46.814	Equus_caballus
ENSSMAG00000011672	polr1e	88	40.554	ENSEEUG00000011928	POLR1E	84	40.351	Erinaceus_europaeus
ENSSMAG00000011672	polr1e	94	67.303	ENSELUG00000008150	polr1e	100	67.303	Esox_lucius
ENSSMAG00000011672	polr1e	93	47.381	ENSFCAG00000013081	POLR1E	99	47.381	Felis_catus
ENSSMAG00000011672	polr1e	88	45.500	ENSFALG00000012950	POLR1E	99	45.500	Ficedula_albicollis
ENSSMAG00000011672	polr1e	94	48.605	ENSFDAG00000016917	POLR1E	100	48.605	Fukomys_damarensis
ENSSMAG00000011672	polr1e	93	74.940	ENSFHEG00000009801	polr1e	99	74.940	Fundulus_heteroclitus
ENSSMAG00000011672	polr1e	92	53.938	ENSGMOG00000003336	POLR1E	99	53.938	Gadus_morhua
ENSSMAG00000011672	polr1e	90	45.966	ENSGALG00000005395	POLR1E	98	45.966	Gallus_gallus
ENSSMAG00000011672	polr1e	93	72.705	ENSGAFG00000004850	polr1e	99	72.705	Gambusia_affinis
ENSSMAG00000011672	polr1e	93	70.335	ENSGACG00000016087	polr1e	99	70.335	Gasterosteus_aculeatus
ENSSMAG00000011672	polr1e	90	43.735	ENSGAGG00000001659	POLR1E	99	43.405	Gopherus_agassizii
ENSSMAG00000011672	polr1e	93	45.714	ENSGGOG00000001882	POLR1E	99	48.148	Gorilla_gorilla
ENSSMAG00000011672	polr1e	94	77.327	ENSHBUG00000002559	polr1e	99	77.327	Haplochromis_burtoni
ENSSMAG00000011672	polr1e	94	47.541	ENSHGLG00000002036	POLR1E	100	47.541	Heterocephalus_glaber_female
ENSSMAG00000011672	polr1e	94	47.775	ENSHGLG00100012784	POLR1E	100	47.775	Heterocephalus_glaber_male
ENSSMAG00000011672	polr1e	93	72.705	ENSHCOG00000002774	polr1e	99	72.705	Hippocampus_comes
ENSSMAG00000011672	polr1e	93	56.132	ENSIPUG00000003019	polr1e	99	56.132	Ictalurus_punctatus
ENSSMAG00000011672	polr1e	93	46.651	ENSSTOG00000009810	POLR1E	99	46.651	Ictidomys_tridecemlineatus
ENSSMAG00000011672	polr1e	96	46.296	ENSJJAG00000020731	Polr1e	99	46.882	Jaculus_jaculus
ENSSMAG00000011672	polr1e	93	77.349	ENSKMAG00000000046	polr1e	99	77.349	Kryptolebias_marmoratus
ENSSMAG00000011672	polr1e	94	76.850	ENSLBEG00000003104	polr1e	99	76.850	Labrus_bergylta
ENSSMAG00000011672	polr1e	80	51.240	ENSLACG00000003416	POLR1E	99	51.240	Latimeria_chalumnae
ENSSMAG00000011672	polr1e	93	52.857	ENSLOCG00000012859	polr1e	99	52.857	Lepisosteus_oculatus
ENSSMAG00000011672	polr1e	91	48.284	ENSLAFG00000012831	POLR1E	96	48.284	Loxodonta_africana
ENSSMAG00000011672	polr1e	93	45.476	ENSMFAG00000045465	POLR1E	99	46.667	Macaca_fascicularis
ENSSMAG00000011672	polr1e	93	45.476	ENSMMUG00000017892	POLR1E	99	46.667	Macaca_mulatta
ENSSMAG00000011672	polr1e	93	41.725	ENSMNEG00000040283	POLR1E	93	47.727	Macaca_nemestrina
ENSSMAG00000011672	polr1e	93	45.476	ENSMLEG00000031135	POLR1E	99	46.667	Mandrillus_leucophaeus
ENSSMAG00000011672	polr1e	94	77.804	ENSMAMG00000001260	polr1e	99	77.804	Mastacembelus_armatus
ENSSMAG00000011672	polr1e	94	77.327	ENSMZEG00005021536	polr1e	99	77.327	Maylandia_zebra
ENSSMAG00000011672	polr1e	97	46.330	ENSMAUG00000021044	Polr1e	99	46.330	Mesocricetus_auratus
ENSSMAG00000011672	polr1e	91	47.689	ENSMICG00000003673	POLR1E	97	47.689	Microcebus_murinus
ENSSMAG00000011672	polr1e	97	45.183	ENSMOCG00000012920	Polr1e	99	45.183	Microtus_ochrogaster
ENSSMAG00000011672	polr1e	93	76.683	ENSMMOG00000007391	polr1e	99	76.683	Mola_mola
ENSSMAG00000011672	polr1e	89	47.666	ENSMODG00000002884	POLR1E	98	47.666	Monodelphis_domestica
ENSSMAG00000011672	polr1e	94	78.998	ENSMALG00000002665	polr1e	99	78.998	Monopterus_albus
ENSSMAG00000011672	polr1e	91	45.700	MGP_CAROLIEiJ_G0025967	Polr1e	97	45.316	Mus_caroli
ENSSMAG00000011672	polr1e	91	46.078	ENSMUSG00000028318	Polr1e	97	45.707	Mus_musculus
ENSSMAG00000011672	polr1e	91	47.549	MGP_PahariEiJ_G0024114	Polr1e	97	47.222	Mus_pahari
ENSSMAG00000011672	polr1e	91	46.324	MGP_SPRETEiJ_G0026930	Polr1e	97	45.960	Mus_spretus
ENSSMAG00000011672	polr1e	91	42.576	ENSMPUG00000006040	POLR1E	97	42.576	Mustela_putorius_furo
ENSSMAG00000011672	polr1e	91	48.284	ENSMLUG00000012688	POLR1E	96	47.268	Myotis_lucifugus
ENSSMAG00000011672	polr1e	97	46.330	ENSNGAG00000002520	Polr1e	99	46.330	Nannospalax_galili
ENSSMAG00000011672	polr1e	94	77.327	ENSNBRG00000016822	polr1e	99	77.327	Neolamprologus_brichardi
ENSSMAG00000011672	polr1e	93	45.476	ENSNLEG00000003616	POLR1E	99	47.407	Nomascus_leucogenys
ENSSMAG00000011672	polr1e	68	53.333	ENSMEUG00000015372	-	80	53.333	Notamacropus_eugenii
ENSSMAG00000011672	polr1e	80	41.389	ENSOPRG00000014206	POLR1E	99	41.389	Ochotona_princeps
ENSSMAG00000011672	polr1e	94	47.268	ENSODEG00000014565	POLR1E	98	47.170	Octodon_degus
ENSSMAG00000011672	polr1e	94	77.804	ENSONIG00000008921	polr1e	99	77.804	Oreochromis_niloticus
ENSSMAG00000011672	polr1e	94	44.941	ENSOCUG00000024773	POLR1E	99	45.368	Oryctolagus_cuniculus
ENSSMAG00000011672	polr1e	93	71.807	ENSORLG00000005143	polr1e	99	71.807	Oryzias_latipes
ENSSMAG00000011672	polr1e	86	69.610	ENSORLG00020007271	polr1e	99	69.792	Oryzias_latipes_hni
ENSSMAG00000011672	polr1e	93	71.807	ENSORLG00015000137	polr1e	99	71.807	Oryzias_latipes_hsok
ENSSMAG00000011672	polr1e	94	69.905	ENSOMEG00000013264	polr1e	99	69.905	Oryzias_melastigma
ENSSMAG00000011672	polr1e	90	46.929	ENSOGAG00000012981	POLR1E	94	46.929	Otolemur_garnettii
ENSSMAG00000011672	polr1e	94	47.281	ENSOARG00000011465	POLR1E	96	47.281	Ovis_aries
ENSSMAG00000011672	polr1e	93	45.476	ENSPPAG00000034566	POLR1E	99	47.407	Pan_paniscus
ENSSMAG00000011672	polr1e	94	46.556	ENSPPRG00000005649	POLR1E	99	46.556	Panthera_pardus
ENSSMAG00000011672	polr1e	94	46.556	ENSPTIG00000009774	POLR1E	99	46.556	Panthera_tigris_altaica
ENSSMAG00000011672	polr1e	93	45.476	ENSPTRG00000020944	POLR1E	99	47.407	Pan_troglodytes
ENSSMAG00000011672	polr1e	93	45.476	ENSPANG00000025563	POLR1E	99	46.667	Papio_anubis
ENSSMAG00000011672	polr1e	93	59.857	ENSPKIG00000003562	polr1e	99	59.857	Paramormyrops_kingsleyae
ENSSMAG00000011672	polr1e	88	47.487	ENSPSIG00000003274	POLR1E	93	47.739	Pelodiscus_sinensis
ENSSMAG00000011672	polr1e	88	67.085	ENSPMGG00000024169	polr1e	96	67.085	Periophthalmus_magnuspinnatus
ENSSMAG00000011672	polr1e	94	38.756	ENSPEMG00000022300	-	96	38.756	Peromyscus_maniculatus_bairdii
ENSSMAG00000011672	polr1e	94	45.843	ENSPEMG00000019151	-	96	45.843	Peromyscus_maniculatus_bairdii
ENSSMAG00000011672	polr1e	92	47.722	ENSPCIG00000014798	POLR1E	99	47.722	Phascolarctos_cinereus
ENSSMAG00000011672	polr1e	93	71.106	ENSPFOG00000019627	polr1e	99	71.106	Poecilia_formosa
ENSSMAG00000011672	polr1e	93	75.121	ENSPLAG00000022679	polr1e	99	75.121	Poecilia_latipinna
ENSSMAG00000011672	polr1e	80	75.419	ENSPMEG00000022123	polr1e	93	75.419	Poecilia_mexicana
ENSSMAG00000011672	polr1e	93	73.188	ENSPREG00000009470	polr1e	99	73.188	Poecilia_reticulata
ENSSMAG00000011672	polr1e	93	45.476	ENSPPYG00000019061	POLR1E	99	45.476	Pongo_abelii
ENSSMAG00000011672	polr1e	50	40.000	ENSPCAG00000004891	POLR1E	74	40.000	Procavia_capensis
ENSSMAG00000011672	polr1e	90	47.922	ENSPCOG00000027448	POLR1E	96	47.922	Propithecus_coquereli
ENSSMAG00000011672	polr1e	89	47.382	ENSPVAG00000007940	POLR1E	84	47.631	Pteropus_vampyrus
ENSSMAG00000011672	polr1e	94	77.327	ENSPNYG00000001032	polr1e	99	77.327	Pundamilia_nyererei
ENSSMAG00000011672	polr1e	93	57.831	ENSPNAG00000006987	polr1e	99	57.831	Pygocentrus_nattereri
ENSSMAG00000011672	polr1e	93	45.107	ENSRNOG00000012664	Polr1e	96	45.107	Rattus_norvegicus
ENSSMAG00000011672	polr1e	88	46.482	ENSRBIG00000034214	POLR1E	99	47.368	Rhinopithecus_bieti
ENSSMAG00000011672	polr1e	93	45.476	ENSRROG00000031986	POLR1E	99	46.667	Rhinopithecus_roxellana
ENSSMAG00000011672	polr1e	90	46.437	ENSSBOG00000021415	POLR1E	96	46.437	Saimiri_boliviensis_boliviensis
ENSSMAG00000011672	polr1e	77	47.714	ENSSHAG00000016084	POLR1E	95	47.714	Sarcophilus_harrisii
ENSSMAG00000011672	polr1e	93	60.432	ENSSFOG00015002293	polr1e	99	60.432	Scleropages_formosus
ENSSMAG00000011672	polr1e	94	82.578	ENSSDUG00000022279	polr1e	99	82.578	Seriola_dumerili
ENSSMAG00000011672	polr1e	94	82.100	ENSSLDG00000024918	polr1e	99	82.100	Seriola_lalandi_dorsalis
ENSSMAG00000011672	polr1e	52	41.810	ENSSARG00000009810	-	58	41.810	Sorex_araneus
ENSSMAG00000011672	polr1e	93	45.933	ENSSPUG00000009499	POLR1E	99	45.933	Sphenodon_punctatus
ENSSMAG00000011672	polr1e	93	79.227	ENSSPAG00000021240	polr1e	99	79.227	Stegastes_partitus
ENSSMAG00000011672	polr1e	91	46.324	ENSSSCG00000005347	POLR1E	97	46.324	Sus_scrofa
ENSSMAG00000011672	polr1e	88	39.286	ENSTGUG00000007169	POLR1E	99	39.286	Taeniopygia_guttata
ENSSMAG00000011672	polr1e	93	71.531	ENSTRUG00000020779	polr1e	99	71.579	Takifugu_rubripes
ENSSMAG00000011672	polr1e	93	72.837	ENSTNIG00000017812	polr1e	99	72.837	Tetraodon_nigroviridis
ENSSMAG00000011672	polr1e	94	46.028	ENSTBEG00000013786	POLR1E	89	46.028	Tupaia_belangeri
ENSSMAG00000011672	polr1e	88	46.115	ENSTTRG00000008294	POLR1E	84	46.115	Tursiops_truncatus
ENSSMAG00000011672	polr1e	91	48.284	ENSUAMG00000012474	POLR1E	96	50.986	Ursus_americanus
ENSSMAG00000011672	polr1e	91	48.284	ENSUMAG00000011496	POLR1E	97	48.284	Ursus_maritimus
ENSSMAG00000011672	polr1e	81	43.052	ENSVPAG00000009048	POLR1E	85	43.052	Vicugna_pacos
ENSSMAG00000011672	polr1e	91	46.569	ENSVVUG00000019954	POLR1E	97	46.569	Vulpes_vulpes
ENSSMAG00000011672	polr1e	93	43.705	ENSXETG00000006533	polr1e	99	43.705	Xenopus_tropicalis
ENSSMAG00000011672	polr1e	93	71.256	ENSXCOG00000013706	polr1e	99	71.256	Xiphophorus_couchianus
ENSSMAG00000011672	polr1e	93	75.362	ENSXMAG00000012484	polr1e	99	75.362	Xiphophorus_maculatus