EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSSMAG00000011769 (Gene tree)
Gene ID: -
Gene Symbol: si:dkey-16l2.16
Alias: -
Full Name: si:dkey-16l2.16
Gene Type: protein_coding
Species: Scophthalmus_maximus
Status: putative
Strand: Plus strand
Length: 2729 bases
Position: chr19:17955797-17958525
Accession: ZDB-GENE-141219-36
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSMAP00000019208	MMR_HSR1	PF01926.23	8.2e-07	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSMAT00000019449	-	666	-	ENSSMAP00000019208	221 (aa)	-	-

Gene Model

Click here to download ENSSMAG00000011769's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSMAG00000011769's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSSMAG00000011769	si:dkey-16l2.16	68	30.968	ENSSMAG00000016456	rasd4	74	30.968
ENSSMAG00000011769	si:dkey-16l2.16	94	39.048	ENSSMAG00000016183	rab25b	97	38.571
ENSSMAG00000011769	si:dkey-16l2.16	88	35.025	ENSSMAG00000017205	-	74	36.364
ENSSMAG00000011769	si:dkey-16l2.16	75	34.659	ENSSMAG00000020045	rab36	67	34.659
ENSSMAG00000011769	si:dkey-16l2.16	92	38.756	ENSSMAG00000018613	-	80	43.103
ENSSMAG00000011769	si:dkey-16l2.16	71	42.767	ENSSMAG00000001002	rab2a	75	42.767
ENSSMAG00000011769	si:dkey-16l2.16	76	38.372	ENSSMAG00000003166	rab14	80	38.372
ENSSMAG00000011769	si:dkey-16l2.16	93	66.184	ENSSMAG00000000660	rab35b	99	66.184
ENSSMAG00000011769	si:dkey-16l2.16	83	43.229	ENSSMAG00000013733	rab33a	63	45.087
ENSSMAG00000011769	si:dkey-16l2.16	74	36.471	ENSSMAG00000013945	si:dkey-13a21.4	83	36.471
ENSSMAG00000011769	si:dkey-16l2.16	73	39.024	ENSSMAG00000010140	rab22a	86	39.130
ENSSMAG00000011769	si:dkey-16l2.16	80	35.602	ENSSMAG00000006709	rab9b	87	35.602
ENSSMAG00000011769	si:dkey-16l2.16	72	40.854	ENSSMAG00000018454	-	80	38.953
ENSSMAG00000011769	si:dkey-16l2.16	73	38.690	ENSSMAG00000001414	-	72	38.690
ENSSMAG00000011769	si:dkey-16l2.16	75	46.154	ENSSMAG00000002569	-	82	46.154
ENSSMAG00000011769	si:dkey-16l2.16	81	41.989	ENSSMAG00000011814	rab18b	80	45.399
ENSSMAG00000011769	si:dkey-16l2.16	92	47.887	ENSSMAG00000004416	-	99	47.887
ENSSMAG00000011769	si:dkey-16l2.16	92	48.792	ENSSMAG00000021049	-	79	58.385
ENSSMAG00000011769	si:dkey-16l2.16	72	43.293	ENSSMAG00000009722	rab25a	78	43.293
ENSSMAG00000011769	si:dkey-16l2.16	92	37.019	ENSSMAG00000016206	rab11al	81	41.379
ENSSMAG00000011769	si:dkey-16l2.16	92	38.278	ENSSMAG00000004922	rab11bb	80	42.529
ENSSMAG00000011769	si:dkey-16l2.16	79	30.055	ENSSMAG00000009101	-	77	30.357
ENSSMAG00000011769	si:dkey-16l2.16	76	30.814	ENSSMAG00000001964	rhebl1	90	30.588
ENSSMAG00000011769	si:dkey-16l2.16	73	32.530	ENSSMAG00000013303	rheb	88	32.530
ENSSMAG00000011769	si:dkey-16l2.16	75	39.286	ENSSMAG00000009229	rab5aa	80	39.286
ENSSMAG00000011769	si:dkey-16l2.16	69	40.506	ENSSMAG00000015955	rab33ba	67	40.506
ENSSMAG00000011769	si:dkey-16l2.16	76	40.306	ENSSMAG00000012178	-	79	40.625
ENSSMAG00000011769	si:dkey-16l2.16	86	38.462	ENSSMAG00000002229	zgc:101559	77	39.459
ENSSMAG00000011769	si:dkey-16l2.16	77	40.000	ENSSMAG00000020311	rab42a	80	40.000
ENSSMAG00000011769	si:dkey-16l2.16	79	44.382	ENSSMAG00000002500	rab30	89	44.382
ENSSMAG00000011769	si:dkey-16l2.16	77	32.184	ENSSMAG00000008745	hrasb	89	32.749
ENSSMAG00000011769	si:dkey-16l2.16	92	39.423	ENSSMAG00000004133	rab11a	96	39.423
ENSSMAG00000011769	si:dkey-16l2.16	92	47.115	ENSSMAG00000009201	rab1ba	99	48.077
ENSSMAG00000011769	si:dkey-16l2.16	71	31.677	ENSSMAG00000007370	kras	88	30.539
ENSSMAG00000011769	si:dkey-16l2.16	77	32.955	ENSSMAG00000014329	si:cabz01085950.1	83	32.934
ENSSMAG00000011769	si:dkey-16l2.16	89	33.649	ENSSMAG00000004343	rab34a	77	33.649
ENSSMAG00000011769	si:dkey-16l2.16	77	44.253	ENSSMAG00000019773	rab15	82	44.253
ENSSMAG00000011769	si:dkey-16l2.16	81	45.055	ENSSMAG00000016376	-	85	47.059
ENSSMAG00000011769	si:dkey-16l2.16	82	36.757	ENSSMAG00000007323	rab5c	84	36.757
ENSSMAG00000011769	si:dkey-16l2.16	71	33.540	ENSSMAG00000006341	rab23	78	33.750
ENSSMAG00000011769	si:dkey-16l2.16	90	31.280	ENSSMAG00000017426	rab9a	91	31.280
ENSSMAG00000011769	si:dkey-16l2.16	89	30.049	ENSSMAG00000019926	rab34b	86	30.000
ENSSMAG00000011769	si:dkey-16l2.16	73	35.465	ENSSMAG00000000335	rab6bb	76	36.601
ENSSMAG00000011769	si:dkey-16l2.16	79	41.808	ENSSMAG00000005651	-	84	41.808
ENSSMAG00000011769	si:dkey-16l2.16	71	31.288	ENSSMAG00000004806	si:ch73-116o1.2	78	31.288
ENSSMAG00000011769	si:dkey-16l2.16	80	38.674	ENSSMAG00000012678	rab12	75	38.674
ENSSMAG00000011769	si:dkey-16l2.16	89	35.000	ENSSMAG00000015774	rab41	73	38.961
ENSSMAG00000011769	si:dkey-16l2.16	69	33.540	ENSSMAG00000000032	dnajc27	59	33.540
ENSSMAG00000011769	si:dkey-16l2.16	80	43.182	ENSSMAG00000002969	rab18a	84	43.605
ENSSMAG00000011769	si:dkey-16l2.16	91	40.097	ENSSMAG00000001953	rab39bb	77	46.667
ENSSMAG00000011769	si:dkey-16l2.16	90	34.466	ENSSMAG00000014078	RAB9A	97	33.981
ENSSMAG00000011769	si:dkey-16l2.16	72	57.317	ENSSMAG00000017528	rab1ab	79	58.491
ENSSMAG00000011769	si:dkey-16l2.16	73	37.500	ENSSMAG00000011579	RAB7A	81	37.500

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSMAG00000011769	si:dkey-16l2.16	94	91.388	ENSAPOG00000008263	si:dkey-16l2.16	100	91.388	Acanthochromis_polyacanthus
ENSSMAG00000011769	si:dkey-16l2.16	94	90.909	ENSAOCG00000016825	si:dkey-16l2.16	100	90.909	Amphiprion_ocellaris
ENSSMAG00000011769	si:dkey-16l2.16	94	90.909	ENSAPEG00000006500	si:dkey-16l2.16	100	90.909	Amphiprion_percula
ENSSMAG00000011769	si:dkey-16l2.16	94	89.474	ENSATEG00000019238	si:dkey-16l2.16	100	89.474	Anabas_testudineus
ENSSMAG00000011769	si:dkey-16l2.16	94	90.909	ENSACLG00000018721	si:dkey-16l2.16	100	90.909	Astatotilapia_calliptera
ENSSMAG00000011769	si:dkey-16l2.16	98	87.156	ENSAMXG00000038243	si:dkey-16l2.16	100	88.995	Astyanax_mexicanus
ENSSMAG00000011769	si:dkey-16l2.16	52	96.491	ENSCSEG00000009988	si:dkey-16l2.16	87	96.491	Cynoglossus_semilaevis
ENSSMAG00000011769	si:dkey-16l2.16	94	90.909	ENSCVAG00000003537	si:dkey-16l2.16	100	90.909	Cyprinodon_variegatus
ENSSMAG00000011769	si:dkey-16l2.16	94	88.038	ENSDARG00000037967	si:dkey-16l2.16	96	95.614	Danio_rerio
ENSSMAG00000011769	si:dkey-16l2.16	93	82.692	ENSELUG00000023247	si:dkey-16l2.16	99	81.250	Esox_lucius
ENSSMAG00000011769	si:dkey-16l2.16	52	96.491	ENSFHEG00000000767	si:dkey-16l2.16	74	96.491	Fundulus_heteroclitus
ENSSMAG00000011769	si:dkey-16l2.16	72	82.099	ENSGMOG00000015174	si:dkey-16l2.16	99	82.099	Gadus_morhua
ENSSMAG00000011769	si:dkey-16l2.16	94	84.211	ENSGAFG00000005388	si:dkey-16l2.16	100	84.211	Gambusia_affinis
ENSSMAG00000011769	si:dkey-16l2.16	94	90.000	ENSGACG00000014915	si:dkey-16l2.16	98	90.000	Gasterosteus_aculeatus
ENSSMAG00000011769	si:dkey-16l2.16	94	90.431	ENSHBUG00000019261	si:dkey-16l2.16	100	90.431	Haplochromis_burtoni
ENSSMAG00000011769	si:dkey-16l2.16	94	90.909	ENSHCOG00000006538	si:dkey-16l2.16	100	90.909	Hippocampus_comes
ENSSMAG00000011769	si:dkey-16l2.16	94	86.058	ENSKMAG00000003494	si:dkey-16l2.16	100	86.058	Kryptolebias_marmoratus
ENSSMAG00000011769	si:dkey-16l2.16	94	91.388	ENSLBEG00000007681	si:dkey-16l2.16	100	91.388	Labrus_bergylta
ENSSMAG00000011769	si:dkey-16l2.16	94	90.431	ENSMAMG00000019230	si:dkey-16l2.16	100	90.431	Mastacembelus_armatus
ENSSMAG00000011769	si:dkey-16l2.16	94	90.909	ENSMZEG00005002081	si:dkey-16l2.16	100	90.909	Maylandia_zebra
ENSSMAG00000011769	si:dkey-16l2.16	92	90.777	ENSMMOG00000020140	si:dkey-16l2.16	97	90.777	Mola_mola
ENSSMAG00000011769	si:dkey-16l2.16	94	88.095	ENSMALG00000014727	si:dkey-16l2.16	99	88.095	Monopterus_albus
ENSSMAG00000011769	si:dkey-16l2.16	94	89.952	ENSNBRG00000008930	si:dkey-16l2.16	100	89.952	Neolamprologus_brichardi
ENSSMAG00000011769	si:dkey-16l2.16	94	89.952	ENSONIG00000009443	si:dkey-16l2.16	100	89.952	Oreochromis_niloticus
ENSSMAG00000011769	si:dkey-16l2.16	94	83.333	ENSORLG00000001098	si:dkey-16l2.16	99	79.524	Oryzias_latipes
ENSSMAG00000011769	si:dkey-16l2.16	94	83.333	ENSORLG00020000867	si:dkey-16l2.16	99	79.524	Oryzias_latipes_hni
ENSSMAG00000011769	si:dkey-16l2.16	94	81.340	ENSOMEG00000015474	si:dkey-16l2.16	100	81.340	Oryzias_melastigma
ENSSMAG00000011769	si:dkey-16l2.16	94	88.995	ENSPKIG00000005686	-	100	88.995	Paramormyrops_kingsleyae
ENSSMAG00000011769	si:dkey-16l2.16	94	77.033	ENSPKIG00000018888	si:dkey-16l2.16	100	77.033	Paramormyrops_kingsleyae
ENSSMAG00000011769	si:dkey-16l2.16	94	88.517	ENSPMGG00000000751	si:dkey-16l2.16	100	88.517	Periophthalmus_magnuspinnatus
ENSSMAG00000011769	si:dkey-16l2.16	94	85.167	ENSPFOG00000004746	si:dkey-16l2.16	100	85.167	Poecilia_formosa
ENSSMAG00000011769	si:dkey-16l2.16	94	84.689	ENSPLAG00000021043	si:dkey-16l2.16	100	84.689	Poecilia_latipinna
ENSSMAG00000011769	si:dkey-16l2.16	94	85.167	ENSPMEG00000007165	si:dkey-16l2.16	100	85.167	Poecilia_mexicana
ENSSMAG00000011769	si:dkey-16l2.16	94	84.689	ENSPREG00000005323	si:dkey-16l2.16	100	84.689	Poecilia_reticulata
ENSSMAG00000011769	si:dkey-16l2.16	94	90.431	ENSPNYG00000009490	si:dkey-16l2.16	100	90.431	Pundamilia_nyererei
ENSSMAG00000011769	si:dkey-16l2.16	94	89.474	ENSPNAG00000018986	si:dkey-16l2.16	100	89.474	Pygocentrus_nattereri
ENSSMAG00000011769	si:dkey-16l2.16	94	89.952	ENSSFOG00015021448	-	100	89.952	Scleropages_formosus
ENSSMAG00000011769	si:dkey-16l2.16	93	75.481	ENSSFOG00015006414	-	99	72.596	Scleropages_formosus
ENSSMAG00000011769	si:dkey-16l2.16	94	92.344	ENSSDUG00000005719	si:dkey-16l2.16	100	92.344	Seriola_dumerili
ENSSMAG00000011769	si:dkey-16l2.16	94	92.344	ENSSLDG00000003631	si:dkey-16l2.16	100	92.344	Seriola_lalandi_dorsalis
ENSSMAG00000011769	si:dkey-16l2.16	94	90.909	ENSSPAG00000006302	si:dkey-16l2.16	100	90.909	Stegastes_partitus
ENSSMAG00000011769	si:dkey-16l2.16	94	90.431	ENSTRUG00000025076	si:dkey-16l2.16	100	90.431	Takifugu_rubripes
ENSSMAG00000011769	si:dkey-16l2.16	94	89.474	ENSTNIG00000011300	si:dkey-16l2.16	100	89.474	Tetraodon_nigroviridis
ENSSMAG00000011769	si:dkey-16l2.16	94	84.689	ENSXMAG00000021767	si:dkey-16l2.16	100	84.689	Xiphophorus_maculatus