EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSSMAG00000011808 (Gene tree)
Gene ID: -
Gene Symbol: srek1
Alias: zgc:100974
Full Name: splicing regulatory glutamine/lysine-rich protein 1
Gene Type: protein_coding
Species: Scophthalmus_maximus
Status: putative
Strand: Minus strand
Length: 12807 bases
Position: chr16:15060694-15073500
Accession: ZDB-GENE-040801-132
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSMAP00000019249	RRM_1	PF00076.22	1.1e-20	1	2
ENSSMAP00000019249	RRM_1	PF00076.22	1.1e-20	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSMAT00000019491	-	3841	-	ENSSMAP00000019249	474 (aa)	-	-

Gene Model

Click here to download ENSSMAG00000011808's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSMAG00000011808's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSSMAG00000011808	srek1	58	41.818	ENSSMAG00000019897	-	95	36.628

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSMAG00000011808	srek1	58	43.478	ENSG00000116754	SRSF11	70	70.000	Homo_sapiens
ENSSMAG00000011808	srek1	82	77.121	ENSAPOG00000023618	srek1	97	78.406	Acanthochromis_polyacanthus
ENSSMAG00000011808	srek1	58	41.455	ENSAPOG00000004488	-	93	64.078	Acanthochromis_polyacanthus
ENSSMAG00000011808	srek1	58	81.362	ENSAMEG00000011327	SREK1	70	56.936	Ailuropoda_melanoleuca
ENSSMAG00000011808	srek1	82	78.920	ENSAOCG00000024379	srek1	97	78.920	Amphiprion_ocellaris
ENSSMAG00000011808	srek1	58	41.367	ENSAPEG00000003142	SRSF11	85	68.293	Amphiprion_percula
ENSSMAG00000011808	srek1	58	41.818	ENSAPEG00000003619	SRSF11	93	64.078	Amphiprion_percula
ENSSMAG00000011808	srek1	58	43.796	ENSATEG00000007534	-	93	64.078	Anabas_testudineus
ENSSMAG00000011808	srek1	58	41.367	ENSATEG00000011691	srsf11	75	69.136	Anabas_testudineus
ENSSMAG00000011808	srek1	82	74.615	ENSATEG00000009450	srek1	97	73.590	Anabas_testudineus
ENSSMAG00000011808	srek1	58	81.915	ENSAPLG00000003948	-	70	79.433	Anas_platyrhynchos
ENSSMAG00000011808	srek1	59	42.199	ENSACAG00000013654	SRSF11	94	35.529	Anolis_carolinensis
ENSSMAG00000011808	srek1	64	70.536	ENSANAG00000031358	SREK1	85	85.882	Aotus_nancymaae
ENSSMAG00000011808	srek1	58	43.478	ENSANAG00000018690	-	61	37.857	Aotus_nancymaae
ENSSMAG00000011808	srek1	59	88.693	ENSACLG00000026754	srek1	96	88.339	Astatotilapia_calliptera
ENSSMAG00000011808	srek1	59	82.935	ENSAMXG00000043877	srek1	99	61.089	Astyanax_mexicanus
ENSSMAG00000011808	srek1	58	41.971	ENSAMXG00000008655	-	81	67.593	Astyanax_mexicanus
ENSSMAG00000011808	srek1	58	81.720	ENSBTAG00000007321	SREK1	85	87.059	Bos_taurus
ENSSMAG00000011808	srek1	58	43.116	ENSBTAG00000015474	SRSF11	77	39.024	Bos_taurus
ENSSMAG00000011808	srek1	58	43.636	ENSCJAG00000017704	SRSF11	51	44.086	Callithrix_jacchus
ENSSMAG00000011808	srek1	64	70.536	ENSCJAG00000015950	SREK1	85	85.882	Callithrix_jacchus
ENSSMAG00000011808	srek1	58	81.362	ENSCAFG00000007560	SREK1	68	57.053	Canis_familiaris
ENSSMAG00000011808	srek1	58	43.273	ENSCHIG00000025295	SRSF11	75	69.663	Capra_hircus
ENSSMAG00000011808	srek1	58	41.304	ENSTSYG00000033270	-	68	67.708	Carlito_syrichta
ENSSMAG00000011808	srek1	58	81.720	ENSTSYG00000036957	SREK1	85	87.059	Carlito_syrichta
ENSSMAG00000011808	srek1	58	79.585	ENSCPOG00000008925	SREK1	72	58.916	Cavia_porcellus
ENSSMAG00000011808	srek1	56	42.264	ENSCPOG00000009554	SRSF11	59	36.790	Cavia_porcellus
ENSSMAG00000011808	srek1	64	70.536	ENSCCAG00000020591	SREK1	85	85.882	Cebus_capucinus
ENSSMAG00000011808	srek1	58	43.478	ENSCCAG00000036133	-	61	37.857	Cebus_capucinus
ENSSMAG00000011808	srek1	58	80.935	ENSCATG00000031482	SREK1	85	85.882	Cercocebus_atys
ENSSMAG00000011808	srek1	58	43.478	ENSCATG00000043613	SRSF11	61	37.857	Cercocebus_atys
ENSSMAG00000011808	srek1	58	80.496	ENSCLAG00000005024	SREK1	72	56.289	Chinchilla_lanigera
ENSSMAG00000011808	srek1	58	43.478	ENSCSAG00000001375	SRSF11	61	37.857	Chlorocebus_sabaeus
ENSSMAG00000011808	srek1	58	81.004	ENSCPBG00000026866	SREK1	84	79.570	Chrysemys_picta_bellii
ENSSMAG00000011808	srek1	58	47.222	ENSCING00000022892	-	92	40.534	Ciona_intestinalis
ENSSMAG00000011808	srek1	58	80.935	ENSCANG00000030421	SREK1	85	85.882	Colobus_angolensis_palliatus
ENSSMAG00000011808	srek1	58	43.478	ENSCANG00000039796	SRSF11	61	37.857	Colobus_angolensis_palliatus
ENSSMAG00000011808	srek1	58	80.851	ENSCGRG00001015222	-	70	60.088	Cricetulus_griseus_chok1gshd
ENSSMAG00000011808	srek1	58	43.478	ENSCGRG00001012043	Srsf11	83	36.667	Cricetulus_griseus_chok1gshd
ENSSMAG00000011808	srek1	58	80.851	ENSCGRG00000002130	-	70	60.088	Cricetulus_griseus_crigri
ENSSMAG00000011808	srek1	59	82.927	ENSDARG00000009764	srek1	98	58.627	Danio_rerio
ENSSMAG00000011808	srek1	58	81.362	ENSDNOG00000010327	SREK1	73	58.182	Dasypus_novemcinctus
ENSSMAG00000011808	srek1	58	43.116	ENSDNOG00000008603	SRSF11	61	37.857	Dasypus_novemcinctus
ENSSMAG00000011808	srek1	58	43.116	ENSDORG00000000669	Srsf11	62	37.619	Dipodomys_ordii
ENSSMAG00000011808	srek1	59	39.437	FBgn0024285	Srp54	53	37.966	Drosophila_melanogaster
ENSSMAG00000011808	srek1	58	68.817	ENSETEG00000012977	SREK1	58	88.235	Echinops_telfairi
ENSSMAG00000011808	srek1	58	43.273	ENSEASG00005007847	SRSF11	78	69.663	Equus_asinus_asinus
ENSSMAG00000011808	srek1	58	42.391	ENSEEUG00000002456	SRSF11	61	37.170	Erinaceus_europaeus
ENSSMAG00000011808	srek1	58	44.526	ENSELUG00000021268	-	69	39.950	Esox_lucius
ENSSMAG00000011808	srek1	58	81.362	ENSFALG00000009835	SREK1	74	54.839	Ficedula_albicollis
ENSSMAG00000011808	srek1	58	80.851	ENSFDAG00000017844	SREK1	71	55.280	Fukomys_damarensis
ENSSMAG00000011808	srek1	58	43.636	ENSFHEG00000003732	SRSF11	92	36.492	Fundulus_heteroclitus
ENSSMAG00000011808	srek1	74	70.085	ENSFHEG00000020971	srek1	99	73.851	Fundulus_heteroclitus
ENSSMAG00000011808	srek1	58	42.909	ENSGMOG00000002255	-	80	66.667	Gadus_morhua
ENSSMAG00000011808	srek1	58	41.091	ENSGAFG00000021415	SRSF11	64	35.897	Gambusia_affinis
ENSSMAG00000011808	srek1	58	42.806	ENSGACG00000017855	-	94	36.505	Gasterosteus_aculeatus
ENSSMAG00000011808	srek1	58	81.004	ENSGAGG00000006087	SREK1	62	88.889	Gopherus_agassizii
ENSSMAG00000011808	srek1	58	80.935	ENSGGOG00000004737	SREK1	85	85.882	Gorilla_gorilla
ENSSMAG00000011808	srek1	58	43.478	ENSGGOG00000005774	SRSF11	61	37.857	Gorilla_gorilla
ENSSMAG00000011808	srek1	58	80.851	ENSHGLG00000001181	SREK1	72	56.250	Heterocephalus_glaber_female
ENSSMAG00000011808	srek1	58	43.116	ENSHGLG00000008682	SRSF11	86	37.045	Heterocephalus_glaber_female
ENSSMAG00000011808	srek1	59	42.652	ENSHGLG00100018382	SRSF11	89	37.090	Heterocephalus_glaber_male
ENSSMAG00000011808	srek1	58	80.851	ENSHGLG00100003207	SREK1	72	57.796	Heterocephalus_glaber_male
ENSSMAG00000011808	srek1	97	61.176	ENSIPUG00000016851	srek1	97	62.897	Ictalurus_punctatus
ENSSMAG00000011808	srek1	58	43.116	ENSSTOG00000008675	SRSF11	62	37.619	Ictidomys_tridecemlineatus
ENSSMAG00000011808	srek1	58	80.496	ENSSTOG00000008850	SREK1	85	87.059	Ictidomys_tridecemlineatus
ENSSMAG00000011808	srek1	58	43.116	ENSJJAG00000017238	Srsf11	64	37.619	Jaculus_jaculus
ENSSMAG00000011808	srek1	58	39.273	ENSKMAG00000009775	srsf11	83	37.923	Kryptolebias_marmoratus
ENSSMAG00000011808	srek1	58	41.007	ENSLBEG00000024167	srsf11	83	69.136	Labrus_bergylta
ENSSMAG00000011808	srek1	58	41.818	ENSLOCG00000009617	srsf11	76	35.135	Lepisosteus_oculatus
ENSSMAG00000011808	srek1	59	82.105	ENSLOCG00000010547	srek1	66	80.351	Lepisosteus_oculatus
ENSSMAG00000011808	srek1	58	43.525	ENSLAFG00000015882	SRSF11	64	38.369	Loxodonta_africana
ENSSMAG00000011808	srek1	58	80.851	ENSLAFG00000013853	SREK1	71	55.833	Loxodonta_africana
ENSSMAG00000011808	srek1	58	43.478	ENSMFAG00000043405	SRSF11	61	37.857	Macaca_fascicularis
ENSSMAG00000011808	srek1	58	80.935	ENSMFAG00000039823	SREK1	85	85.882	Macaca_fascicularis
ENSSMAG00000011808	srek1	58	43.478	ENSMMUG00000013852	SRSF11	63	38.061	Macaca_mulatta
ENSSMAG00000011808	srek1	64	75.738	ENSMMUG00000014586	SREK1	79	86.047	Macaca_mulatta
ENSSMAG00000011808	srek1	58	43.478	ENSMNEG00000029428	SRSF11	61	37.857	Macaca_nemestrina
ENSSMAG00000011808	srek1	58	80.935	ENSMNEG00000030723	SREK1	85	85.882	Macaca_nemestrina
ENSSMAG00000011808	srek1	58	80.935	ENSMLEG00000039078	SREK1	85	85.882	Mandrillus_leucophaeus
ENSSMAG00000011808	srek1	58	43.478	ENSMLEG00000041592	SRSF11	61	37.857	Mandrillus_leucophaeus
ENSSMAG00000011808	srek1	58	44.000	ENSMAMG00000015002	-	93	64.078	Mastacembelus_armatus
ENSSMAG00000011808	srek1	58	80.496	ENSMAUG00000010066	-	84	58.703	Mesocricetus_auratus
ENSSMAG00000011808	srek1	58	43.478	ENSMAUG00000008832	Srsf11	60	38.443	Mesocricetus_auratus
ENSSMAG00000011808	srek1	58	43.273	ENSMICG00000005537	SRSF11	88	35.760	Microcebus_murinus
ENSSMAG00000011808	srek1	64	70.833	ENSMICG00000034959	SREK1	85	87.059	Microcebus_murinus
ENSSMAG00000011808	srek1	58	43.478	ENSMOCG00000011388	Srsf11	83	36.667	Microtus_ochrogaster
ENSSMAG00000011808	srek1	58	80.851	ENSMOCG00000001536	-	84	58.389	Microtus_ochrogaster
ENSSMAG00000011808	srek1	58	42.545	ENSMMOG00000016751	-	89	61.111	Mola_mola
ENSSMAG00000011808	srek1	91	61.556	ENSMODG00000019665	SREK1	72	60.667	Monodelphis_domestica
ENSSMAG00000011808	srek1	100	78.782	ENSMALG00000017086	srek1	98	94.253	Monopterus_albus
ENSSMAG00000011808	srek1	58	43.478	MGP_CAROLIEiJ_G0025767	Srsf11	86	72.093	Mus_caroli
ENSSMAG00000011808	srek1	58	43.478	ENSMUSG00000055436	Srsf11	85	72.093	Mus_musculus
ENSSMAG00000011808	srek1	58	43.478	MGP_PahariEiJ_G0027217	Srsf11	86	72.093	Mus_pahari
ENSSMAG00000011808	srek1	58	43.478	MGP_SPRETEiJ_G0026719	Srsf11	86	72.093	Mus_spretus
ENSSMAG00000011808	srek1	58	43.116	ENSMPUG00000000892	SRSF11	61	37.619	Mustela_putorius_furo
ENSSMAG00000011808	srek1	58	81.362	ENSMPUG00000014736	SREK1	63	60.455	Mustela_putorius_furo
ENSSMAG00000011808	srek1	58	42.029	ENSMLUG00000026338	-	87	35.948	Myotis_lucifugus
ENSSMAG00000011808	srek1	58	43.116	ENSNGAG00000010637	Srsf11	59	38.173	Nannospalax_galili
ENSSMAG00000011808	srek1	58	43.478	ENSNLEG00000009400	SRSF11	62	37.857	Nomascus_leucogenys
ENSSMAG00000011808	srek1	58	80.935	ENSNLEG00000003827	SREK1	85	85.882	Nomascus_leucogenys
ENSSMAG00000011808	srek1	58	81.362	ENSOPRG00000012111	SREK1	77	61.521	Ochotona_princeps
ENSSMAG00000011808	srek1	58	43.116	ENSODEG00000006289	SRSF11	87	37.223	Octodon_degus
ENSSMAG00000011808	srek1	88	79.187	ENSONIG00000011080	srek1	97	82.578	Oreochromis_niloticus
ENSSMAG00000011808	srek1	50	80.567	ENSOANG00000005029	SREK1	81	54.791	Ornithorhynchus_anatinus
ENSSMAG00000011808	srek1	58	81.362	ENSOCUG00000001319	SREK1	69	57.233	Oryctolagus_cuniculus
ENSSMAG00000011808	srek1	58	43.321	ENSOCUG00000025440	-	68	36.603	Oryctolagus_cuniculus
ENSSMAG00000011808	srek1	58	43.165	ENSOCUG00000002001	-	63	36.754	Oryctolagus_cuniculus
ENSSMAG00000011808	srek1	58	43.273	ENSORLG00000007753	srsf11	69	41.206	Oryzias_latipes
ENSSMAG00000011808	srek1	58	43.273	ENSORLG00020016204	srsf11	79	39.556	Oryzias_latipes_hni
ENSSMAG00000011808	srek1	58	43.841	ENSORLG00020009393	-	89	61.765	Oryzias_latipes_hni
ENSSMAG00000011808	srek1	58	43.841	ENSORLG00015009374	-	89	61.765	Oryzias_latipes_hsok
ENSSMAG00000011808	srek1	58	43.273	ENSORLG00015011944	srsf11	79	39.381	Oryzias_latipes_hsok
ENSSMAG00000011808	srek1	100	65.190	ENSOMEG00000015817	srek1	100	70.464	Oryzias_melastigma
ENSSMAG00000011808	srek1	58	42.754	ENSOMEG00000006172	-	80	37.307	Oryzias_melastigma
ENSSMAG00000011808	srek1	53	33.721	ENSOGAG00000016463	SREK1	59	54.762	Otolemur_garnettii
ENSSMAG00000011808	srek1	58	42.960	ENSOGAG00000003392	SRSF11	62	37.292	Otolemur_garnettii
ENSSMAG00000011808	srek1	58	81.720	ENSOARG00000006005	SREK1	73	60.123	Ovis_aries
ENSSMAG00000011808	srek1	58	43.116	ENSOARG00000011887	SRSF11	69	40.976	Ovis_aries
ENSSMAG00000011808	srek1	58	80.935	ENSPPAG00000031605	SREK1	79	86.047	Pan_paniscus
ENSSMAG00000011808	srek1	58	43.478	ENSPPAG00000036149	SRSF11	61	37.857	Pan_paniscus
ENSSMAG00000011808	srek1	58	80.645	ENSPPRG00000024617	SREK1	85	84.706	Panthera_pardus
ENSSMAG00000011808	srek1	58	43.116	ENSPPRG00000002720	SRSF11	85	36.640	Panthera_pardus
ENSSMAG00000011808	srek1	58	80.645	ENSPTIG00000006608	SREK1	85	84.706	Panthera_tigris_altaica
ENSSMAG00000011808	srek1	58	80.935	ENSPTRG00000016936	SREK1	85	85.882	Pan_troglodytes
ENSSMAG00000011808	srek1	58	43.636	ENSPTRG00000000852	SRSF11	61	37.857	Pan_troglodytes
ENSSMAG00000011808	srek1	58	43.478	ENSPANG00000018677	SRSF11	61	37.857	Papio_anubis
ENSSMAG00000011808	srek1	58	80.935	ENSPANG00000008953	SREK1	85	85.882	Papio_anubis
ENSSMAG00000011808	srek1	59	85.664	ENSPKIG00000025563	srek1	98	57.640	Paramormyrops_kingsleyae
ENSSMAG00000011808	srek1	58	43.478	ENSPEMG00000014288	Srsf11	60	38.443	Peromyscus_maniculatus_bairdii
ENSSMAG00000011808	srek1	58	80.851	ENSPEMG00000024051	-	84	57.143	Peromyscus_maniculatus_bairdii
ENSSMAG00000011808	srek1	58	45.196	ENSPMAG00000004397	srsf11	58	37.590	Petromyzon_marinus
ENSSMAG00000011808	srek1	58	43.116	ENSPCIG00000002083	SRSF11	83	36.268	Phascolarctos_cinereus
ENSSMAG00000011808	srek1	58	40.364	ENSPLAG00000009484	-	66	63.158	Poecilia_latipinna
ENSSMAG00000011808	srek1	58	40.364	ENSPMEG00000023453	-	66	63.158	Poecilia_mexicana
ENSSMAG00000011808	srek1	73	61.979	ENSPMEG00000006831	srek1	94	65.633	Poecilia_mexicana
ENSSMAG00000011808	srek1	58	41.091	ENSPREG00000009065	SRSF11	75	36.111	Poecilia_reticulata
ENSSMAG00000011808	srek1	58	43.478	ENSPPYG00000001245	SRSF11	61	37.857	Pongo_abelii
ENSSMAG00000011808	srek1	50	74.793	ENSPCAG00000004955	SREK1	67	56.311	Procavia_capensis
ENSSMAG00000011808	srek1	58	81.362	ENSPCOG00000026230	SREK1	85	87.059	Propithecus_coquereli
ENSSMAG00000011808	srek1	58	81.362	ENSPVAG00000009763	SREK1	75	57.028	Pteropus_vampyrus
ENSSMAG00000011808	srek1	67	76.398	ENSPNYG00000007160	srek1	99	74.534	Pundamilia_nyererei
ENSSMAG00000011808	srek1	98	63.707	ENSPNAG00000004328	srek1	99	66.194	Pygocentrus_nattereri
ENSSMAG00000011808	srek1	58	43.478	ENSRNOG00000029592	Srsf11	83	36.667	Rattus_norvegicus
ENSSMAG00000011808	srek1	58	81.004	ENSRBIG00000033818	SREK1	85	85.882	Rhinopithecus_bieti
ENSSMAG00000011808	srek1	58	43.478	ENSRBIG00000042971	SRSF11	78	64.356	Rhinopithecus_bieti
ENSSMAG00000011808	srek1	58	43.478	ENSRROG00000039667	SRSF11	61	37.857	Rhinopithecus_roxellana
ENSSMAG00000011808	srek1	58	80.935	ENSRROG00000017210	SREK1	85	85.882	Rhinopithecus_roxellana
ENSSMAG00000011808	srek1	58	43.478	ENSSBOG00000033461	SRSF11	78	64.356	Saimiri_boliviensis_boliviensis
ENSSMAG00000011808	srek1	58	80.645	ENSSBOG00000031230	SREK1	85	85.882	Saimiri_boliviensis_boliviensis
ENSSMAG00000011808	srek1	58	43.116	ENSSHAG00000012111	SRSF11	89	36.865	Sarcophilus_harrisii
ENSSMAG00000011808	srek1	96	60.385	ENSSFOG00015004995	srek1	95	60.077	Scleropages_formosus
ENSSMAG00000011808	srek1	58	41.818	ENSSFOG00015014887	srsf11	92	37.376	Scleropages_formosus
ENSSMAG00000011808	srek1	58	41.818	ENSSDUG00000018738	-	94	36.436	Seriola_dumerili
ENSSMAG00000011808	srek1	58	43.841	ENSSLDG00000012105	-	93	64.078	Seriola_lalandi_dorsalis
ENSSMAG00000011808	srek1	59	43.262	ENSSPUG00000016145	SRSF11	70	37.674	Sphenodon_punctatus
ENSSMAG00000011808	srek1	58	80.357	ENSSPUG00000016553	SREK1	89	79.137	Sphenodon_punctatus
ENSSMAG00000011808	srek1	58	41.818	ENSSPAG00000016483	-	66	70.732	Stegastes_partitus
ENSSMAG00000011808	srek1	56	67.893	ENSTTRG00000009684	SREK1	73	55.799	Tursiops_truncatus
ENSSMAG00000011808	srek1	58	43.478	ENSTTRG00000015054	SRSF11	61	36.817	Tursiops_truncatus
ENSSMAG00000011808	srek1	58	43.116	ENSUMAG00000006618	SRSF11	67	36.580	Ursus_maritimus
ENSSMAG00000011808	srek1	58	81.362	ENSUMAG00000008191	SREK1	71	60.566	Ursus_maritimus
ENSSMAG00000011808	srek1	58	42.029	ENSXETG00000012371	SRSF11	64	36.145	Xenopus_tropicalis
ENSSMAG00000011808	srek1	59	73.616	ENSXETG00000021460	srek1	82	56.550	Xenopus_tropicalis
ENSSMAG00000011808	srek1	58	41.091	ENSXMAG00000019180	SRSF11	63	63.158	Xiphophorus_maculatus