EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSSMAG00000011861 (Gene tree)
Gene ID: -
Gene Symbol: polr1d
Alias: im:7162148|zgc:136449
Full Name: RNA polymerase I and III subunit D
Gene Type: protein_coding
Species: Scophthalmus_maximus
Status: putative
Strand: Minus strand
Length: 6359 bases
Position: chr13:18153535-18159893
Accession: ZDB-GENE-040930-4
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSMAP00000019345	RNA_pol_L_2	PF13656.6	2.5e-28	1	1
ENSSMAP00000019354	RNA_pol_L_2	PF13656.6	3.8e-14	1	1
ENSSMAP00000019345	RNA_pol_L	PF01193.24	3.7e-10	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSMAT00000019586	-	3648	-	ENSSMAP00000019345	114 (aa)	-	A0A2U9C794
ENSSMAT00000019597	-	3550	-	ENSSMAP00000019354	125 (aa)	-	-

Gene Model

Click here to download ENSSMAG00000011861's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSMAG00000011861's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSSMAG00000011861	polr1d	74	36.905	ENSSMAG00000006729	polr2j	69	36.905

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSMAG00000011861	polr1d	94	68.224	ENSG00000186184	POLR1D	92	68.224	Homo_sapiens
ENSSMAG00000011861	polr1d	89	85.294	ENSAPOG00000021882	polr1d	96	85.294	Acanthochromis_polyacanthus
ENSSMAG00000011861	polr1d	94	69.159	ENSAMEG00000019095	POLR1D	86	69.159	Ailuropoda_melanoleuca
ENSSMAG00000011861	polr1d	100	90.435	ENSACIG00000013328	polr1d	100	90.435	Amphilophus_citrinellus
ENSSMAG00000011861	polr1d	100	84.211	ENSAOCG00000018500	polr1d	100	84.211	Amphiprion_ocellaris
ENSSMAG00000011861	polr1d	100	85.088	ENSAPEG00000009489	polr1d	100	85.088	Amphiprion_percula
ENSSMAG00000011861	polr1d	100	93.860	ENSATEG00000019322	polr1d	100	93.860	Anabas_testudineus
ENSSMAG00000011861	polr1d	97	63.964	ENSACAG00000015753	POLR1D	96	63.964	Anolis_carolinensis
ENSSMAG00000011861	polr1d	94	68.224	ENSANAG00000024486	POLR1D	80	68.224	Aotus_nancymaae
ENSSMAG00000011861	polr1d	100	93.860	ENSACLG00000023805	polr1d	100	93.860	Astatotilapia_calliptera
ENSSMAG00000011861	polr1d	99	75.221	ENSAMXG00000036118	polr1d	98	75.221	Astyanax_mexicanus
ENSSMAG00000011861	polr1d	94	67.290	ENSBTAG00000033252	-	80	67.290	Bos_taurus
ENSSMAG00000011861	polr1d	94	67.290	ENSBTAG00000008642	POLR1D	80	67.290	Bos_taurus
ENSSMAG00000011861	polr1d	70	35.000	WBGene00010230	rpac-19	56	35.000	Caenorhabditis_elegans
ENSSMAG00000011861	polr1d	94	69.159	ENSCJAG00000044669	POLR1D	80	69.159	Callithrix_jacchus
ENSSMAG00000011861	polr1d	94	69.159	ENSCAFG00000006755	POLR1D	80	69.159	Canis_familiaris
ENSSMAG00000011861	polr1d	94	68.224	ENSCHIG00000021910	POLR1D	80	68.224	Capra_hircus
ENSSMAG00000011861	polr1d	93	60.185	ENSTSYG00000034852	-	89	60.185	Carlito_syrichta
ENSSMAG00000011861	polr1d	93	69.811	ENSTSYG00000026817	-	80	69.811	Carlito_syrichta
ENSSMAG00000011861	polr1d	57	58.462	ENSCAPG00000006058	-	66	58.462	Cavia_aperea
ENSSMAG00000011861	polr1d	58	57.576	ENSCPOG00000030450	-	67	57.576	Cavia_porcellus
ENSSMAG00000011861	polr1d	94	69.159	ENSCCAG00000021349	-	80	69.159	Cebus_capucinus
ENSSMAG00000011861	polr1d	94	51.402	ENSCCAG00000020191	-	78	51.402	Cebus_capucinus
ENSSMAG00000011861	polr1d	94	68.224	ENSCATG00000030710	-	80	68.224	Cercocebus_atys
ENSSMAG00000011861	polr1d	93	58.491	ENSCATG00000022900	-	79	58.491	Cercocebus_atys
ENSSMAG00000011861	polr1d	94	68.224	ENSCLAG00000017623	POLR1D	86	68.224	Chinchilla_lanigera
ENSSMAG00000011861	polr1d	89	78.218	ENSCPBG00000004719	POLR1D	100	78.218	Chrysemys_picta_bellii
ENSSMAG00000011861	polr1d	93	67.925	ENSCANG00000037694	-	80	67.925	Colobus_angolensis_palliatus
ENSSMAG00000011861	polr1d	94	68.224	ENSCANG00000028632	-	80	68.224	Colobus_angolensis_palliatus
ENSSMAG00000011861	polr1d	94	67.290	ENSCGRG00001021251	Polr1d	80	67.290	Cricetulus_griseus_chok1gshd
ENSSMAG00000011861	polr1d	94	67.290	ENSCGRG00000011639	Polr1d	80	67.290	Cricetulus_griseus_crigri
ENSSMAG00000011861	polr1d	93	91.509	ENSCSEG00000018268	polr1d	100	88.034	Cynoglossus_semilaevis
ENSSMAG00000011861	polr1d	100	83.333	ENSCVAG00000018527	polr1d	100	83.333	Cyprinodon_variegatus
ENSSMAG00000011861	polr1d	91	75.962	ENSDARG00000037570	polr1d	93	75.962	Danio_rerio
ENSSMAG00000011861	polr1d	94	66.355	ENSDNOG00000046247	-	80	66.355	Dasypus_novemcinctus
ENSSMAG00000011861	polr1d	94	67.290	ENSDNOG00000043676	-	80	67.290	Dasypus_novemcinctus
ENSSMAG00000011861	polr1d	94	67.290	ENSDORG00000029155	Polr1d	80	67.290	Dipodomys_ordii
ENSSMAG00000011861	polr1d	75	49.412	FBgn0086447	l(2)37Cg	80	49.412	Drosophila_melanogaster
ENSSMAG00000011861	polr1d	94	70.093	ENSETEG00000012797	POLR1D	86	70.093	Echinops_telfairi
ENSSMAG00000011861	polr1d	81	65.217	ENSEBUG00000011748	polr1d	64	65.217	Eptatretus_burgeri
ENSSMAG00000011861	polr1d	94	69.159	ENSEASG00005022487	POLR1D	83	69.159	Equus_asinus_asinus
ENSSMAG00000011861	polr1d	93	69.811	ENSEEUG00000013144	POLR1D	85	69.811	Erinaceus_europaeus
ENSSMAG00000011861	polr1d	97	81.250	ENSELUG00000005105	rpac2	98	81.250	Esox_lucius
ENSSMAG00000011861	polr1d	94	69.159	ENSFCAG00000030162	POLR1D	80	69.159	Felis_catus
ENSSMAG00000011861	polr1d	88	72.000	ENSFALG00000011463	POLR1D	99	72.000	Ficedula_albicollis
ENSSMAG00000011861	polr1d	94	67.290	ENSFDAG00000004463	POLR1D	80	67.290	Fukomys_damarensis
ENSSMAG00000011861	polr1d	100	85.965	ENSFHEG00000015410	polr1d	99	85.965	Fundulus_heteroclitus
ENSSMAG00000011861	polr1d	59	61.194	ENSGALG00000007470	POLR1D	66	61.194	Gallus_gallus
ENSSMAG00000011861	polr1d	100	87.719	ENSGAFG00000001693	polr1d	100	87.719	Gambusia_affinis
ENSSMAG00000011861	polr1d	96	91.743	ENSGACG00000018585	polr1d	92	91.743	Gasterosteus_aculeatus
ENSSMAG00000011861	polr1d	100	75.439	ENSGAGG00000008503	POLR1D	100	75.439	Gopherus_agassizii
ENSSMAG00000011861	polr1d	94	68.224	ENSGGOG00000004235	POLR1D	80	68.224	Gorilla_gorilla
ENSSMAG00000011861	polr1d	100	93.860	ENSHBUG00000002111	polr1d	100	93.860	Haplochromis_burtoni
ENSSMAG00000011861	polr1d	94	66.355	ENSHGLG00000003202	POLR1D	80	66.355	Heterocephalus_glaber_female
ENSSMAG00000011861	polr1d	94	66.355	ENSHGLG00100009393	POLR1D	80	66.355	Heterocephalus_glaber_male
ENSSMAG00000011861	polr1d	100	80.702	ENSHCOG00000003258	polr1d	100	80.702	Hippocampus_comes
ENSSMAG00000011861	polr1d	100	78.261	ENSIPUG00000014810	polr1d	100	78.261	Ictalurus_punctatus
ENSSMAG00000011861	polr1d	94	68.224	ENSSTOG00000013877	POLR1D	80	68.224	Ictidomys_tridecemlineatus
ENSSMAG00000011861	polr1d	94	53.271	ENSJJAG00000021667	-	63	53.271	Jaculus_jaculus
ENSSMAG00000011861	polr1d	94	68.224	ENSJJAG00000022671	-	89	68.224	Jaculus_jaculus
ENSSMAG00000011861	polr1d	100	85.088	ENSKMAG00000015256	polr1d	100	85.088	Kryptolebias_marmoratus
ENSSMAG00000011861	polr1d	100	92.105	ENSLBEG00000015919	polr1d	100	92.105	Labrus_bergylta
ENSSMAG00000011861	polr1d	94	68.519	ENSLACG00000006810	POLR1D	90	68.519	Latimeria_chalumnae
ENSSMAG00000011861	polr1d	62	80.282	ENSLOCG00000014976	polr1d	96	80.282	Lepisosteus_oculatus
ENSSMAG00000011861	polr1d	95	67.593	ENSLAFG00000032290	POLR1D	81	67.593	Loxodonta_africana
ENSSMAG00000011861	polr1d	94	68.224	ENSMFAG00000045264	POLR1D	83	68.224	Macaca_fascicularis
ENSSMAG00000011861	polr1d	94	68.224	ENSMMUG00000020386	POLR1D	92	68.224	Macaca_mulatta
ENSSMAG00000011861	polr1d	71	62.963	ENSMMUG00000041570	-	73	62.963	Macaca_mulatta
ENSSMAG00000011861	polr1d	94	68.224	ENSMNEG00000008630	-	80	68.224	Macaca_nemestrina
ENSSMAG00000011861	polr1d	93	53.774	ENSMNEG00000038120	-	78	53.774	Macaca_nemestrina
ENSSMAG00000011861	polr1d	94	68.224	ENSMLEG00000041048	-	80	68.224	Mandrillus_leucophaeus
ENSSMAG00000011861	polr1d	93	59.434	ENSMLEG00000032251	-	79	59.434	Mandrillus_leucophaeus
ENSSMAG00000011861	polr1d	89	91.176	ENSMAMG00000014834	polr1d	95	91.176	Mastacembelus_armatus
ENSSMAG00000011861	polr1d	89	90.196	ENSMZEG00005006638	polr1d	90	90.196	Maylandia_zebra
ENSSMAG00000011861	polr1d	81	75.000	ENSMGAG00000005322	POLR1D	84	75.000	Meleagris_gallopavo
ENSSMAG00000011861	polr1d	94	67.290	ENSMAUG00000001946	Polr1d	80	67.290	Mesocricetus_auratus
ENSSMAG00000011861	polr1d	94	67.290	ENSMICG00000016883	-	80	67.290	Microcebus_murinus
ENSSMAG00000011861	polr1d	98	51.786	ENSMICG00000007349	-	84	51.786	Microcebus_murinus
ENSSMAG00000011861	polr1d	94	66.355	ENSMOCG00000021288	Polr1d	80	66.355	Microtus_ochrogaster
ENSSMAG00000011861	polr1d	100	90.351	ENSMMOG00000009605	polr1d	100	90.351	Mola_mola
ENSSMAG00000011861	polr1d	100	71.930	ENSMODG00000023881	POLR1D	100	71.930	Monodelphis_domestica
ENSSMAG00000011861	polr1d	100	86.842	ENSMALG00000010652	polr1d	100	86.842	Monopterus_albus
ENSSMAG00000011861	polr1d	91	68.269	MGP_CAROLIEiJ_G0028034	Polr1d	78	68.269	Mus_caroli
ENSSMAG00000011861	polr1d	98	64.286	ENSMUSG00000029642	Polr1d	84	64.286	Mus_musculus
ENSSMAG00000011861	polr1d	94	66.355	MGP_PahariEiJ_G0024600	Polr1d	80	66.355	Mus_pahari
ENSSMAG00000011861	polr1d	98	65.179	MGP_SPRETEiJ_G0029032	Polr1d	84	65.179	Mus_spretus
ENSSMAG00000011861	polr1d	94	68.224	ENSMLUG00000027169	-	80	68.224	Myotis_lucifugus
ENSSMAG00000011861	polr1d	94	62.617	ENSMLUG00000004118	-	80	62.617	Myotis_lucifugus
ENSSMAG00000011861	polr1d	95	67.593	ENSNGAG00000006014	Polr1d	93	67.593	Nannospalax_galili
ENSSMAG00000011861	polr1d	100	93.860	ENSNBRG00000020327	polr1d	100	93.860	Neolamprologus_brichardi
ENSSMAG00000011861	polr1d	94	68.224	ENSNLEG00000000358	POLR1D	80	68.224	Nomascus_leucogenys
ENSSMAG00000011861	polr1d	93	68.868	ENSODEG00000005294	-	80	68.868	Octodon_degus
ENSSMAG00000011861	polr1d	93	57.547	ENSODEG00000014801	-	77	57.547	Octodon_degus
ENSSMAG00000011861	polr1d	93	76.415	ENSOANG00000008708	-	98	76.415	Ornithorhynchus_anatinus
ENSSMAG00000011861	polr1d	94	68.224	ENSOCUG00000015706	POLR1D	66	68.224	Oryctolagus_cuniculus
ENSSMAG00000011861	polr1d	100	83.333	ENSORLG00000010257	polr1d	100	83.333	Oryzias_latipes
ENSSMAG00000011861	polr1d	100	83.333	ENSORLG00020000533	polr1d	77	83.333	Oryzias_latipes_hni
ENSSMAG00000011861	polr1d	100	82.456	ENSORLG00015013267	polr1d	75	82.456	Oryzias_latipes_hsok
ENSSMAG00000011861	polr1d	100	81.579	ENSOMEG00000014912	polr1d	76	81.579	Oryzias_melastigma
ENSSMAG00000011861	polr1d	98	66.964	ENSOGAG00000014601	POLR1D	84	66.964	Otolemur_garnettii
ENSSMAG00000011861	polr1d	94	68.224	ENSOARG00000017005	POLR1D	82	68.224	Ovis_aries
ENSSMAG00000011861	polr1d	94	68.224	ENSPPAG00000028138	POLR1D	80	68.224	Pan_paniscus
ENSSMAG00000011861	polr1d	94	69.159	ENSPPRG00000003381	POLR1D	80	69.159	Panthera_pardus
ENSSMAG00000011861	polr1d	94	69.159	ENSPTIG00000018137	POLR1D	80	69.159	Panthera_tigris_altaica
ENSSMAG00000011861	polr1d	94	68.224	ENSPTRG00000005734	POLR1D	80	68.224	Pan_troglodytes
ENSSMAG00000011861	polr1d	94	68.224	ENSPANG00000020259	-	80	68.224	Papio_anubis
ENSSMAG00000011861	polr1d	93	58.491	ENSPANG00000035051	-	79	58.491	Papio_anubis
ENSSMAG00000011861	polr1d	85	80.412	ENSPKIG00000021891	polr1d	98	60.976	Paramormyrops_kingsleyae
ENSSMAG00000011861	polr1d	100	71.053	ENSPSIG00000011822	POLR1D	88	71.053	Pelodiscus_sinensis
ENSSMAG00000011861	polr1d	100	81.579	ENSPMGG00000010359	polr1d	99	81.579	Periophthalmus_magnuspinnatus
ENSSMAG00000011861	polr1d	100	73.684	ENSPMGG00000012998	POLR1D	84	73.684	Periophthalmus_magnuspinnatus
ENSSMAG00000011861	polr1d	94	67.290	ENSPEMG00000006336	-	82	67.290	Peromyscus_maniculatus_bairdii
ENSSMAG00000011861	polr1d	95	58.333	ENSPMAG00000004228	polr1d	90	58.333	Petromyzon_marinus
ENSSMAG00000011861	polr1d	100	71.053	ENSPCIG00000001673	POLR1D	100	71.053	Phascolarctos_cinereus
ENSSMAG00000011861	polr1d	100	88.596	ENSPFOG00000023343	polr1d	100	88.596	Poecilia_formosa
ENSSMAG00000011861	polr1d	100	88.596	ENSPLAG00000009675	polr1d	100	88.596	Poecilia_latipinna
ENSSMAG00000011861	polr1d	100	88.596	ENSPMEG00000004628	polr1d	100	88.596	Poecilia_mexicana
ENSSMAG00000011861	polr1d	100	88.596	ENSPREG00000022032	polr1d	100	88.596	Poecilia_reticulata
ENSSMAG00000011861	polr1d	94	66.355	ENSPCOG00000028175	POLR1D	80	66.355	Propithecus_coquereli
ENSSMAG00000011861	polr1d	100	93.860	ENSPNYG00000000107	polr1d	100	93.860	Pundamilia_nyererei
ENSSMAG00000011861	polr1d	96	72.477	ENSPNAG00000001512	polr1d	100	69.748	Pygocentrus_nattereri
ENSSMAG00000011861	polr1d	93	66.981	ENSRBIG00000000336	-	80	66.981	Rhinopithecus_bieti
ENSSMAG00000011861	polr1d	94	68.224	ENSRBIG00000036378	-	80	68.224	Rhinopithecus_bieti
ENSSMAG00000011861	polr1d	93	66.981	ENSRROG00000026751	-	80	66.981	Rhinopithecus_roxellana
ENSSMAG00000011861	polr1d	94	68.224	ENSRROG00000042232	-	80	68.224	Rhinopithecus_roxellana
ENSSMAG00000011861	polr1d	79	48.889	YNL113W	RPC19	70	45.455	Saccharomyces_cerevisiae
ENSSMAG00000011861	polr1d	94	68.224	ENSSBOG00000028482	-	80	68.224	Saimiri_boliviensis_boliviensis
ENSSMAG00000011861	polr1d	87	67.677	ENSSBOG00000030146	-	73	67.677	Saimiri_boliviensis_boliviensis
ENSSMAG00000011861	polr1d	97	69.369	ENSSHAG00000001190	POLR1D	86	69.369	Sarcophilus_harrisii
ENSSMAG00000011861	polr1d	96	76.364	ENSSFOG00015011375	polr1d	96	76.364	Scleropages_formosus
ENSSMAG00000011861	polr1d	100	96.491	ENSSDUG00000011930	polr1d	100	96.491	Seriola_dumerili
ENSSMAG00000011861	polr1d	99	85.965	ENSSLDG00000023871	polr1d	97	85.965	Seriola_lalandi_dorsalis
ENSSMAG00000011861	polr1d	94	69.159	ENSSARG00000007840	POLR1D	80	69.159	Sorex_araneus
ENSSMAG00000011861	polr1d	92	73.333	ENSSPUG00000005786	POLR1D	95	70.270	Sphenodon_punctatus
ENSSMAG00000011861	polr1d	100	91.228	ENSSPAG00000011764	polr1d	100	91.228	Stegastes_partitus
ENSSMAG00000011861	polr1d	94	67.290	ENSSSCG00000009310	POLR1D	80	67.290	Sus_scrofa
ENSSMAG00000011861	polr1d	84	71.875	ENSTGUG00000005450	POLR1D	100	71.875	Taeniopygia_guttata
ENSSMAG00000011861	polr1d	100	78.947	ENSTRUG00000019741	polr1d	100	78.947	Takifugu_rubripes
ENSSMAG00000011861	polr1d	98	66.071	ENSTBEG00000007006	POLR1D	90	66.071	Tupaia_belangeri
ENSSMAG00000011861	polr1d	94	69.159	ENSUAMG00000011413	POLR1D	80	69.159	Ursus_americanus
ENSSMAG00000011861	polr1d	94	69.159	ENSUMAG00000016968	POLR1D	84	69.159	Ursus_maritimus
ENSSMAG00000011861	polr1d	94	69.159	ENSVVUG00000009216	POLR1D	80	69.159	Vulpes_vulpes
ENSSMAG00000011861	polr1d	89	87.129	ENSXCOG00000011731	polr1d	78	87.129	Xiphophorus_couchianus
ENSSMAG00000011861	polr1d	89	86.139	ENSXMAG00000017538	polr1d	78	86.139	Xiphophorus_maculatus