EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSSMAG00000011929 (Gene tree)
Gene ID: -
Gene Symbol: pcbp3
Alias: -
Full Name: poly(rC) binding protein 3
Gene Type: protein_coding
Species: Scophthalmus_maximus
Status: putative
Strand: Minus strand
Length: 10237 bases
Position: chr1:9214121-9224357
Accession: ZDB-GENE-050522-157
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSMAP00000019456	KH_1	PF00013.29	1.3e-50	1	3
ENSSMAP00000019456	KH_1	PF00013.29	1.3e-50	2	3
ENSSMAP00000019456	KH_1	PF00013.29	1.3e-50	3	3
ENSSMAP00000019456	KH_2	PF07650.17	1.1e-11	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSMAT00000019697	-	933	-	ENSSMAP00000019456	310 (aa)	-	-

Gene Model

Click here to download ENSSMAG00000011929's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSMAG00000011929's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSSMAG00000011929	pcbp3	73	55.556	ENSSMAG00000007969	hnrpkl	53	40.708
ENSSMAG00000011929	pcbp3	68	40.625	ENSSMAG00000004167	khsrp	58	40.625
ENSSMAG00000011929	pcbp3	95	76.129	ENSSMAG00000012889	PCBP2	95	76.129
ENSSMAG00000011929	pcbp3	93	37.662	ENSSMAG00000020189	-	50	37.662
ENSSMAG00000011929	pcbp3	96	71.613	ENSSMAG00000013541	zgc:110045	91	70.698
ENSSMAG00000011929	pcbp3	68	36.842	ENSSMAG00000017905	-	56	36.842
ENSSMAG00000011929	pcbp3	73	33.333	ENSSMAG00000012166	KHSRP	56	33.333
ENSSMAG00000011929	pcbp3	92	34.615	ENSSMAG00000003793	FUBP3	75	34.615
ENSSMAG00000011929	pcbp3	95	75.325	ENSSMAG00000005182	pcbp2	95	75.325
ENSSMAG00000011929	pcbp3	95	61.231	ENSSMAG00000009392	-	92	61.231
ENSSMAG00000011929	pcbp3	95	60.550	ENSSMAG00000005827	pcbp4	65	60.550
ENSSMAG00000011929	pcbp3	86	43.396	ENSSMAG00000010576	igf2bp2b	64	34.247
ENSSMAG00000011929	pcbp3	97	95.114	ENSSMAG00000003135	-	97	95.114

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSMAG00000011929	pcbp3	98	100.000	ENSAPOG00000020003	pcbp3	87	100.000	Acanthochromis_polyacanthus
ENSSMAG00000011929	pcbp3	97	95.161	ENSAPOG00000016582	-	97	94.249	Acanthochromis_polyacanthus
ENSSMAG00000011929	pcbp3	95	88.199	ENSAMEG00000001697	-	95	83.976	Ailuropoda_melanoleuca
ENSSMAG00000011929	pcbp3	97	92.049	ENSACIG00000010933	pcbp3	95	92.049	Amphilophus_citrinellus
ENSSMAG00000011929	pcbp3	97	93.631	ENSACIG00000002739	-	97	93.631	Amphilophus_citrinellus
ENSSMAG00000011929	pcbp3	98	97.125	ENSAOCG00000008592	-	99	97.125	Amphiprion_ocellaris
ENSSMAG00000011929	pcbp3	87	93.262	ENSAOCG00000007806	-	96	93.262	Amphiprion_ocellaris
ENSSMAG00000011929	pcbp3	97	90.149	ENSAPEG00000008011	pcbp3	95	90.149	Amphiprion_percula
ENSSMAG00000011929	pcbp3	97	95.455	ENSAPEG00000005209	-	97	95.455	Amphiprion_percula
ENSSMAG00000011929	pcbp3	97	92.923	ENSATEG00000015787	-	100	92.923	Anabas_testudineus
ENSSMAG00000011929	pcbp3	97	96.721	ENSATEG00000009833	-	97	96.721	Anabas_testudineus
ENSSMAG00000011929	pcbp3	95	89.590	ENSAPLG00000002975	-	95	89.590	Anas_platyrhynchos
ENSSMAG00000011929	pcbp3	95	74.857	ENSAPLG00000008951	-	78	74.857	Anas_platyrhynchos
ENSSMAG00000011929	pcbp3	95	80.982	ENSACAG00000009819	-	94	80.982	Anolis_carolinensis
ENSSMAG00000011929	pcbp3	95	82.370	ENSACAG00000004607	-	96	82.370	Anolis_carolinensis
ENSSMAG00000011929	pcbp3	73	95.595	ENSANAG00000030702	-	95	95.595	Aotus_nancymaae
ENSSMAG00000011929	pcbp3	97	97.020	ENSACLG00000003801	-	96	97.020	Astatotilapia_calliptera
ENSSMAG00000011929	pcbp3	97	89.851	ENSACLG00000011835	pcbp3	95	89.851	Astatotilapia_calliptera
ENSSMAG00000011929	pcbp3	97	88.589	ENSAMXG00000003440	pcbp3	95	88.589	Astyanax_mexicanus
ENSSMAG00000011929	pcbp3	95	69.375	ENSAMXG00000001760	zgc:110045	72	69.375	Astyanax_mexicanus
ENSSMAG00000011929	pcbp3	97	94.702	ENSAMXG00000013588	-	100	94.702	Astyanax_mexicanus
ENSSMAG00000011929	pcbp3	89	93.013	ENSCAFG00020019472	-	81	93.013	Canis_lupus_dingo
ENSSMAG00000011929	pcbp3	95	93.729	ENSCSAG00000007440	-	86	93.729	Chlorocebus_sabaeus
ENSSMAG00000011929	pcbp3	95	80.615	ENSCPBG00000000733	-	72	80.615	Chrysemys_picta_bellii
ENSSMAG00000011929	pcbp3	97	92.258	ENSCPBG00000012151	-	92	92.258	Chrysemys_picta_bellii
ENSSMAG00000011929	pcbp3	98	98.020	ENSCSEG00000000822	pcbp3	99	98.020	Cynoglossus_semilaevis
ENSSMAG00000011929	pcbp3	97	79.878	ENSCSEG00000016984	-	97	79.878	Cynoglossus_semilaevis
ENSSMAG00000011929	pcbp3	97	95.130	ENSCVAG00000005262	-	97	95.130	Cyprinodon_variegatus
ENSSMAG00000011929	pcbp3	97	89.851	ENSCVAG00000014482	pcbp3	95	89.851	Cyprinodon_variegatus
ENSSMAG00000011929	pcbp3	97	88.889	ENSDARG00000054378	pcbp3	97	88.889	Danio_rerio
ENSSMAG00000011929	pcbp3	95	81.518	ENSETEG00000015988	-	95	81.518	Echinops_telfairi
ENSSMAG00000011929	pcbp3	95	78.431	ENSEBUG00000007485	-	92	78.082	Eptatretus_burgeri
ENSSMAG00000011929	pcbp3	92	71.239	ENSEBUG00000005495	pcbp3	68	71.239	Eptatretus_burgeri
ENSSMAG00000011929	pcbp3	86	75.000	ENSEBUG00000016192	pcbp3	99	75.000	Eptatretus_burgeri
ENSSMAG00000011929	pcbp3	98	91.857	ENSELUG00000003521	pcbp3	97	91.857	Esox_lucius
ENSSMAG00000011929	pcbp3	97	94.839	ENSELUG00000001560	-	98	85.174	Esox_lucius
ENSSMAG00000011929	pcbp3	95	93.399	ENSFALG00000003949	-	95	93.399	Ficedula_albicollis
ENSSMAG00000011929	pcbp3	95	75.143	ENSFALG00000004411	-	74	75.143	Ficedula_albicollis
ENSSMAG00000011929	pcbp3	97	99.669	ENSFHEG00000016615	pcbp3	95	99.669	Fundulus_heteroclitus
ENSSMAG00000011929	pcbp3	97	95.455	ENSFHEG00000006539	-	97	95.455	Fundulus_heteroclitus
ENSSMAG00000011929	pcbp3	97	69.789	ENSGMOG00000008611	-	100	69.789	Gadus_morhua
ENSSMAG00000011929	pcbp3	97	79.580	ENSGMOG00000011992	pcbp3	96	79.641	Gadus_morhua
ENSSMAG00000011929	pcbp3	95	82.267	ENSGALG00000004394	-	98	89.130	Gallus_gallus
ENSSMAG00000011929	pcbp3	96	82.243	ENSGALG00000013155	-	98	82.243	Gallus_gallus
ENSSMAG00000011929	pcbp3	97	94.516	ENSGAFG00000010274	-	95	94.516	Gambusia_affinis
ENSSMAG00000011929	pcbp3	98	90.030	ENSGAFG00000011430	pcbp3	96	90.030	Gambusia_affinis
ENSSMAG00000011929	pcbp3	98	88.182	ENSGACG00000002266	-	96	88.182	Gasterosteus_aculeatus
ENSSMAG00000011929	pcbp3	97	80.170	ENSGACG00000014955	-	97	80.170	Gasterosteus_aculeatus
ENSSMAG00000011929	pcbp3	76	90.217	ENSGAGG00000006956	-	76	90.217	Gopherus_agassizii
ENSSMAG00000011929	pcbp3	86	88.390	ENSGAGG00000000271	-	100	88.390	Gopherus_agassizii
ENSSMAG00000011929	pcbp3	97	97.020	ENSHBUG00000021782	-	96	97.020	Haplochromis_burtoni
ENSSMAG00000011929	pcbp3	98	96.785	ENSHBUG00000010697	pcbp3	98	96.785	Haplochromis_burtoni
ENSSMAG00000011929	pcbp3	97	90.120	ENSHCOG00000017868	pcbp3	95	90.120	Hippocampus_comes
ENSSMAG00000011929	pcbp3	97	89.677	ENSHCOG00000006067	-	96	89.677	Hippocampus_comes
ENSSMAG00000011929	pcbp3	97	97.020	ENSIPUG00000006238	pcbp3	96	97.020	Ictalurus_punctatus
ENSSMAG00000011929	pcbp3	97	89.851	ENSKMAG00000003046	pcbp3	95	89.851	Kryptolebias_marmoratus
ENSSMAG00000011929	pcbp3	97	93.548	ENSKMAG00000018530	-	95	93.548	Kryptolebias_marmoratus
ENSSMAG00000011929	pcbp3	97	98.361	ENSLBEG00000006201	pcbp3	95	98.361	Labrus_bergylta
ENSSMAG00000011929	pcbp3	97	81.410	ENSLBEG00000006542	-	96	81.410	Labrus_bergylta
ENSSMAG00000011929	pcbp3	95	75.216	ENSLACG00000010804	zgc:110045	73	75.216	Latimeria_chalumnae
ENSSMAG00000011929	pcbp3	95	80.747	ENSLACG00000010386	pcbp3	73	80.747	Latimeria_chalumnae
ENSSMAG00000011929	pcbp3	95	88.235	ENSLOCG00000009369	pcbp3	95	88.235	Lepisosteus_oculatus
ENSSMAG00000011929	pcbp3	95	80.308	ENSLOCG00000005058	zgc:110045	79	80.308	Lepisosteus_oculatus
ENSSMAG00000011929	pcbp3	97	95.410	ENSMAMG00000011620	-	97	95.410	Mastacembelus_armatus
ENSSMAG00000011929	pcbp3	99	99.020	ENSMAMG00000022336	pcbp3	94	99.020	Mastacembelus_armatus
ENSSMAG00000011929	pcbp3	97	89.137	ENSMZEG00005014882	-	95	89.776	Maylandia_zebra
ENSSMAG00000011929	pcbp3	99	88.496	ENSMZEG00005008993	pcbp3	99	88.496	Maylandia_zebra
ENSSMAG00000011929	pcbp3	95	75.143	ENSMGAG00000006794	-	74	75.143	Meleagris_gallopavo
ENSSMAG00000011929	pcbp3	95	77.971	ENSMGAG00000001883	-	95	78.261	Meleagris_gallopavo
ENSSMAG00000011929	pcbp3	98	94.888	ENSMMOG00000000730	pcbp3	88	94.888	Mola_mola
ENSSMAG00000011929	pcbp3	97	97.020	ENSMMOG00000005216	-	96	97.020	Mola_mola
ENSSMAG00000011929	pcbp3	76	73.894	ENSMODG00000027884	-	99	73.894	Monodelphis_domestica
ENSSMAG00000011929	pcbp3	99	90.691	ENSMALG00000000691	pcbp3	97	90.691	Monopterus_albus
ENSSMAG00000011929	pcbp3	95	84.783	ENSMPUG00000001779	-	87	84.783	Mustela_putorius_furo
ENSSMAG00000011929	pcbp3	97	92.308	ENSNBRG00000016409	-	95	92.308	Neolamprologus_brichardi
ENSSMAG00000011929	pcbp3	97	89.776	ENSNBRG00000016714	-	95	89.776	Neolamprologus_brichardi
ENSSMAG00000011929	pcbp3	95	82.353	ENSOPRG00000003431	-	99	82.353	Ochotona_princeps
ENSSMAG00000011929	pcbp3	97	94.516	ENSONIG00000004611	-	97	94.516	Oreochromis_niloticus
ENSSMAG00000011929	pcbp3	99	84.594	ENSONIG00000012122	-	99	84.594	Oreochromis_niloticus
ENSSMAG00000011929	pcbp3	95	93.069	ENSOCUG00000002696	-	86	93.069	Oryctolagus_cuniculus
ENSSMAG00000011929	pcbp3	97	94.516	ENSORLG00000022739	-	97	94.516	Oryzias_latipes
ENSSMAG00000011929	pcbp3	97	97.419	ENSORLG00000000059	pcbp3	100	97.419	Oryzias_latipes
ENSSMAG00000011929	pcbp3	97	96.689	ENSORLG00020006124	-	96	96.689	Oryzias_latipes_hni
ENSSMAG00000011929	pcbp3	99	96.497	ENSORLG00020012671	pcbp3	99	96.497	Oryzias_latipes_hni
ENSSMAG00000011929	pcbp3	99	96.497	ENSORLG00015000429	pcbp3	99	96.497	Oryzias_latipes_hsok
ENSSMAG00000011929	pcbp3	97	94.516	ENSORLG00015008051	-	95	94.516	Oryzias_latipes_hsok
ENSSMAG00000011929	pcbp3	97	96.689	ENSOMEG00000020162	-	96	96.689	Oryzias_melastigma
ENSSMAG00000011929	pcbp3	91	98.582	ENSOMEG00000020811	pcbp3	98	98.582	Oryzias_melastigma
ENSSMAG00000011929	pcbp3	95	80.516	ENSOGAG00000008044	-	96	80.516	Otolemur_garnettii
ENSSMAG00000011929	pcbp3	97	96.053	ENSPKIG00000019329	pcbp3	97	96.053	Paramormyrops_kingsleyae
ENSSMAG00000011929	pcbp3	77	87.912	ENSPKIG00000020913	-	82	87.912	Paramormyrops_kingsleyae
ENSSMAG00000011929	pcbp3	95	80.000	ENSPSIG00000014970	-	95	80.625	Pelodiscus_sinensis
ENSSMAG00000011929	pcbp3	71	80.328	ENSPSIG00000008350	-	67	80.328	Pelodiscus_sinensis
ENSSMAG00000011929	pcbp3	99	88.529	ENSPMGG00000022383	pcbp3	97	88.529	Periophthalmus_magnuspinnatus
ENSSMAG00000011929	pcbp3	76	85.106	ENSPMAG00000004637	-	97	85.106	Petromyzon_marinus
ENSSMAG00000011929	pcbp3	98	71.203	ENSPMAG00000004551	pcbp3	89	71.203	Petromyzon_marinus
ENSSMAG00000011929	pcbp3	95	87.117	ENSPCIG00000028092	-	96	87.558	Phascolarctos_cinereus
ENSSMAG00000011929	pcbp3	98	85.838	ENSPLAG00000011449	pcbp3	88	85.838	Poecilia_latipinna
ENSSMAG00000011929	pcbp3	96	93.248	ENSPLAG00000004074	-	89	93.248	Poecilia_latipinna
ENSSMAG00000011929	pcbp3	98	89.711	ENSPMEG00000006653	-	96	90.093	Poecilia_mexicana
ENSSMAG00000011929	pcbp3	98	90.000	ENSPMEG00000021239	pcbp3	97	87.791	Poecilia_mexicana
ENSSMAG00000011929	pcbp3	97	97.020	ENSPREG00000020585	-	96	97.020	Poecilia_reticulata
ENSSMAG00000011929	pcbp3	98	97.705	ENSPREG00000015736	pcbp3	99	97.705	Poecilia_reticulata
ENSSMAG00000011929	pcbp3	97	97.020	ENSPNYG00000013205	-	96	97.020	Pundamilia_nyererei
ENSSMAG00000011929	pcbp3	98	97.106	ENSPNYG00000012326	pcbp3	96	97.106	Pundamilia_nyererei
ENSSMAG00000011929	pcbp3	97	95.161	ENSPNAG00000015104	pcbp3	97	95.161	Pygocentrus_nattereri
ENSSMAG00000011929	pcbp3	97	95.333	ENSPNAG00000008541	-	98	95.333	Pygocentrus_nattereri
ENSSMAG00000011929	pcbp3	95	93.729	ENSRNOG00000001245	Pcbp3	95	93.729	Rattus_norvegicus
ENSSMAG00000011929	pcbp3	95	83.810	ENSRBIG00000028177	-	87	83.810	Rhinopithecus_bieti
ENSSMAG00000011929	pcbp3	95	87.616	ENSSHAG00000007890	-	95	87.616	Sarcophilus_harrisii
ENSSMAG00000011929	pcbp3	96	84.262	ENSSFOG00015007118	-	94	84.262	Scleropages_formosus
ENSSMAG00000011929	pcbp3	97	86.787	ENSSFOG00015014706	pcbp3	95	86.787	Scleropages_formosus
ENSSMAG00000011929	pcbp3	97	94.839	ENSSFOG00015010205	pcbp3	95	94.839	Scleropages_formosus
ENSSMAG00000011929	pcbp3	98	92.073	ENSSDUG00000011608	pcbp3	99	92.073	Seriola_dumerili
ENSSMAG00000011929	pcbp3	97	91.290	ENSSDUG00000008502	-	95	91.290	Seriola_dumerili
ENSSMAG00000011929	pcbp3	97	95.161	ENSSLDG00000020161	-	95	95.161	Seriola_lalandi_dorsalis
ENSSMAG00000011929	pcbp3	98	92.073	ENSSLDG00000008518	pcbp3	99	92.073	Seriola_lalandi_dorsalis
ENSSMAG00000011929	pcbp3	95	76.316	ENSSPUG00000013214	-	90	84.264	Sphenodon_punctatus
ENSSMAG00000011929	pcbp3	87	93.262	ENSSPAG00000004190	-	96	93.262	Stegastes_partitus
ENSSMAG00000011929	pcbp3	97	79.697	ENSSPAG00000023341	-	95	79.697	Stegastes_partitus
ENSSMAG00000011929	pcbp3	95	87.129	ENSTGUG00000008158	-	95	87.129	Taeniopygia_guttata
ENSSMAG00000011929	pcbp3	95	85.759	ENSTGUG00000003316	-	95	85.759	Taeniopygia_guttata
ENSSMAG00000011929	pcbp3	97	93.478	ENSTRUG00000013604	pcbp3	95	93.478	Takifugu_rubripes
ENSSMAG00000011929	pcbp3	96	91.333	ENSTRUG00000006280	-	96	91.333	Takifugu_rubripes
ENSSMAG00000011929	pcbp3	95	80.925	ENSTTRG00000015075	-	96	80.925	Tursiops_truncatus
ENSSMAG00000011929	pcbp3	95	86.997	ENSXETG00000011483	pcbp1	95	86.997	Xenopus_tropicalis
ENSSMAG00000011929	pcbp3	90	75.460	ENSXETG00000010491	pcbp2	72	75.460	Xenopus_tropicalis
ENSSMAG00000011929	pcbp3	99	87.791	ENSXCOG00000020481	pcbp3	97	87.791	Xiphophorus_couchianus
ENSSMAG00000011929	pcbp3	97	94.839	ENSXMAG00000028711	-	95	94.839	Xiphophorus_maculatus
ENSSMAG00000011929	pcbp3	97	90.149	ENSXMAG00000008175	pcbp3	95	90.149	Xiphophorus_maculatus