EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSSMAG00000011935 (Gene tree)
Gene ID: -
Gene Symbol: rbm42
Alias: mgc10433l|zgc:109907
Full Name: RNA binding motif protein 42
Gene Type: protein_coding
Species: Scophthalmus_maximus
Status: putative
Strand: Minus strand
Length: 9880 bases
Position: chr1:30271116-30280995
Accession: ZDB-GENE-040809-2
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSMAP00000019446	RRM_1	PF00076.22	9.3e-18	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSMAT00000019687	-	5572	-	ENSSMAP00000019446	405 (aa)	-	A0A2U9AZM2

Gene Model

Click here to download ENSSMAG00000011935's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSMAG00000011935's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSMAG00000011935	rbm42	100	85.749	ENSAPOG00000015109	rbm42	100	86.978	Acanthochromis_polyacanthus
ENSSMAG00000011935	rbm42	100	78.378	ENSACIG00000010771	rbm42	100	79.361	Amphilophus_citrinellus
ENSSMAG00000011935	rbm42	100	85.995	ENSAOCG00000008873	rbm42	100	85.995	Amphiprion_ocellaris
ENSSMAG00000011935	rbm42	100	85.995	ENSAPEG00000012051	rbm42	99	85.995	Amphiprion_percula
ENSSMAG00000011935	rbm42	100	84.521	ENSATEG00000000536	rbm42	100	84.521	Anabas_testudineus
ENSSMAG00000011935	rbm42	100	84.767	ENSACLG00000004988	rbm42	100	84.521	Astatotilapia_calliptera
ENSSMAG00000011935	rbm42	100	72.356	ENSAMXG00000016545	rbm42	100	73.558	Astyanax_mexicanus
ENSSMAG00000011935	rbm42	97	82.161	ENSCSEG00000010248	rbm42	100	82.412	Cynoglossus_semilaevis
ENSSMAG00000011935	rbm42	100	77.859	ENSCVAG00000015589	rbm42	100	77.616	Cyprinodon_variegatus
ENSSMAG00000011935	rbm42	100	66.508	ENSDARG00000039910	rbm42	100	71.429	Danio_rerio
ENSSMAG00000011935	rbm42	100	70.093	ENSELUG00000022403	rbm42	100	72.642	Esox_lucius
ENSSMAG00000011935	rbm42	72	75.667	ENSFHEG00000006764	rbm42	100	77.000	Fundulus_heteroclitus
ENSSMAG00000011935	rbm42	100	73.366	ENSGMOG00000012660	rbm42	100	74.334	Gadus_morhua
ENSSMAG00000011935	rbm42	76	72.414	ENSGAFG00000009059	rbm42	99	74.921	Gambusia_affinis
ENSSMAG00000011935	rbm42	100	83.292	ENSGACG00000004170	rbm42	100	82.555	Gasterosteus_aculeatus
ENSSMAG00000011935	rbm42	100	84.521	ENSHBUG00000011141	rbm42	100	84.275	Haplochromis_burtoni
ENSSMAG00000011935	rbm42	100	77.751	ENSHCOG00000021214	rbm42	100	79.707	Hippocampus_comes
ENSSMAG00000011935	rbm42	100	71.667	ENSIPUG00000022365	rbm42	99	72.143	Ictalurus_punctatus
ENSSMAG00000011935	rbm42	91	77.957	ENSKMAG00000015287	rbm42	99	78.495	Kryptolebias_marmoratus
ENSSMAG00000011935	rbm42	100	83.902	ENSLBEG00000017547	rbm42	100	83.659	Labrus_bergylta
ENSSMAG00000011935	rbm42	84	84.438	ENSLBEG00000004578	-	96	83.429	Labrus_bergylta
ENSSMAG00000011935	rbm42	100	65.957	ENSLOCG00000003368	rbm42	100	65.640	Lepisosteus_oculatus
ENSSMAG00000011935	rbm42	100	85.749	ENSMAMG00000006708	rbm42	100	85.749	Mastacembelus_armatus
ENSSMAG00000011935	rbm42	100	84.767	ENSMZEG00005025234	rbm42	100	84.521	Maylandia_zebra
ENSSMAG00000011935	rbm42	91	84.054	ENSMALG00000015720	rbm42	100	84.054	Monopterus_albus
ENSSMAG00000011935	rbm42	100	83.659	ENSONIG00000008029	rbm42	100	83.415	Oreochromis_niloticus
ENSSMAG00000011935	rbm42	100	61.045	ENSORLG00020022507	rbm42	100	59.174	Oryzias_latipes_hni
ENSSMAG00000011935	rbm42	100	78.624	ENSORLG00015000659	rbm42	100	79.607	Oryzias_latipes_hsok
ENSSMAG00000011935	rbm42	59	80.913	ENSOMEG00000014332	rbm42	91	82.305	Oryzias_melastigma
ENSSMAG00000011935	rbm42	100	71.223	ENSPKIG00000015165	rbm42	100	72.356	Paramormyrops_kingsleyae
ENSSMAG00000011935	rbm42	73	83.152	ENSPMGG00000003569	rbm42	100	97.143	Periophthalmus_magnuspinnatus
ENSSMAG00000011935	rbm42	52	53.448	ENSPMAG00000008633	rbm42	100	47.244	Petromyzon_marinus
ENSSMAG00000011935	rbm42	100	74.878	ENSPFOG00000007701	rbm42	100	77.073	Poecilia_formosa
ENSSMAG00000011935	rbm42	100	74.878	ENSPLAG00000009405	rbm42	100	76.829	Poecilia_latipinna
ENSSMAG00000011935	rbm42	100	75.122	ENSPMEG00000010375	rbm42	100	77.317	Poecilia_mexicana
ENSSMAG00000011935	rbm42	100	74.878	ENSPREG00000018102	rbm42	100	77.073	Poecilia_reticulata
ENSSMAG00000011935	rbm42	100	84.521	ENSPNYG00000014460	rbm42	100	84.275	Pundamilia_nyererei
ENSSMAG00000011935	rbm42	100	71.698	ENSPNAG00000009961	rbm42	100	73.585	Pygocentrus_nattereri
ENSSMAG00000011935	rbm42	100	68.894	ENSSFOG00015019227	rbm42	100	69.087	Scleropages_formosus
ENSSMAG00000011935	rbm42	100	90.418	ENSSDUG00000004033	rbm42	100	90.418	Seriola_dumerili
ENSSMAG00000011935	rbm42	100	78.378	ENSSLDG00000009918	rbm42	100	91.765	Seriola_lalandi_dorsalis
ENSSMAG00000011935	rbm42	100	86.241	ENSSPAG00000019871	rbm42	100	87.224	Stegastes_partitus
ENSSMAG00000011935	rbm42	100	77.641	ENSTRUG00000024586	-	76	76.167	Takifugu_rubripes
ENSSMAG00000011935	rbm42	99	67.347	ENSTNIG00000011669	rbm42	100	68.326	Tetraodon_nigroviridis
ENSSMAG00000011935	rbm42	100	55.111	ENSXETG00000017599	rbm42	100	57.773	Xenopus_tropicalis
ENSSMAG00000011935	rbm42	100	74.453	ENSXMAG00000012827	rbm42	100	76.341	Xiphophorus_maculatus