EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSSMAG00000012029 (Gene tree)
Gene ID: -
Gene Symbol: fubp1
Alias: wu:fa92h11|wu:fb24h11|wu:fc26f06|zgc:66046
Full Name: far upstream element (FUSE) binding protein 1
Gene Type: protein_coding
Species: Scophthalmus_maximus
Status: putative
Strand: Minus strand
Length: 10910 bases
Position: chr7:3536006-3546915
Accession: ZDB-GENE-040426-2159
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSMAP00000019597	KH_1	PF00013.29	1.3e-68	1	4
ENSSMAP00000019597	KH_1	PF00013.29	1.3e-68	2	4
ENSSMAP00000019597	KH_1	PF00013.29	1.3e-68	3	4
ENSSMAP00000019597	KH_1	PF00013.29	1.3e-68	4	4
ENSSMAP00000019597	KH_2	PF07650.17	5.5e-20	1	2
ENSSMAP00000019597	KH_2	PF07650.17	5.5e-20	2	2
ENSSMAP00000019597	DUF1897	PF09005.10	1.9e-14	1	2
ENSSMAP00000019597	DUF1897	PF09005.10	1.9e-14	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSMAT00000019839	-	4127	-	ENSSMAP00000019597	686 (aa)	-	-

Gene Model

Click here to download ENSSMAG00000012029's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSMAG00000012029's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSSMAG00000012029	fubp1	53	39.437	ENSSMAG00000009392	-	55	39.437
ENSSMAG00000012029	fubp1	53	31.953	ENSSMAG00000014262	igf2bp3	63	33.117
ENSSMAG00000012029	fubp1	62	44.444	ENSSMAG00000012889	PCBP2	64	44.444
ENSSMAG00000012029	fubp1	72	74.576	ENSSMAG00000004167	khsrp	98	51.650
ENSSMAG00000012029	fubp1	60	42.857	ENSSMAG00000005182	pcbp2	70	42.857
ENSSMAG00000012029	fubp1	95	48.287	ENSSMAG00000017905	-	98	47.961
ENSSMAG00000012029	fubp1	85	48.490	ENSSMAG00000003793	FUBP3	94	48.322

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSMAG00000012029	fubp1	57	63.362	ENSG00000162613	FUBP1	100	66.667	Homo_sapiens
ENSSMAG00000012029	fubp1	89	93.092	ENSAPOG00000014845	fubp1	89	92.951	Acanthochromis_polyacanthus
ENSSMAG00000012029	fubp1	98	84.172	ENSACIG00000020024	fubp1	100	84.172	Amphilophus_citrinellus
ENSSMAG00000012029	fubp1	91	97.436	ENSAPEG00000012232	fubp1	100	82.789	Amphiprion_percula
ENSSMAG00000012029	fubp1	98	94.048	ENSATEG00000018619	fubp1	100	94.048	Anabas_testudineus
ENSSMAG00000012029	fubp1	65	73.069	ENSACAG00000006310	FUBP1	96	66.147	Anolis_carolinensis
ENSSMAG00000012029	fubp1	98	89.881	ENSACLG00000006708	fubp1	100	89.732	Astatotilapia_calliptera
ENSSMAG00000012029	fubp1	85	83.217	ENSAMXG00000005525	fubp1	99	79.720	Astyanax_mexicanus
ENSSMAG00000012029	fubp1	62	48.276	ENSTSYG00000000148	FUBP1	100	66.308	Carlito_syrichta
ENSSMAG00000012029	fubp1	54	77.778	ENSCAPG00000011052	-	66	77.737	Cavia_aperea
ENSSMAG00000012029	fubp1	89	62.216	ENSCCAG00000036537	FUBP1	100	62.216	Cebus_capucinus
ENSSMAG00000012029	fubp1	100	87.026	ENSCSEG00000021412	fubp1	100	85.131	Cynoglossus_semilaevis
ENSSMAG00000012029	fubp1	98	88.507	ENSCVAG00000014487	fubp1	99	88.806	Cyprinodon_variegatus
ENSSMAG00000012029	fubp1	98	82.232	ENSDARG00000029248	fubp1	100	82.232	Danio_rerio
ENSSMAG00000012029	fubp1	81	48.889	ENSDNOG00000034565	-	69	48.230	Dasypus_novemcinctus
ENSSMAG00000012029	fubp1	70	75.575	ENSETEG00000000948	-	53	75.862	Echinops_telfairi
ENSSMAG00000012029	fubp1	63	64.286	ENSEBUG00000016143	fubp1	64	56.757	Eptatretus_burgeri
ENSSMAG00000012029	fubp1	69	80.464	ENSEEUG00000001287	FUBP1	87	64.368	Erinaceus_europaeus
ENSSMAG00000012029	fubp1	98	83.088	ENSELUG00000007990	fubp1	100	82.941	Esox_lucius
ENSSMAG00000012029	fubp1	98	88.839	ENSFHEG00000005230	fubp1	100	89.137	Fundulus_heteroclitus
ENSSMAG00000012029	fubp1	98	80.861	ENSGMOG00000003370	fubp1	100	76.558	Gadus_morhua
ENSSMAG00000012029	fubp1	61	78.436	ENSGALG00000008939	FUBP1	100	65.889	Gallus_gallus
ENSSMAG00000012029	fubp1	98	87.848	ENSGAFG00000020972	fubp1	100	88.141	Gambusia_affinis
ENSSMAG00000012029	fubp1	98	87.463	ENSGACG00000016563	fubp1	100	83.309	Gasterosteus_aculeatus
ENSSMAG00000012029	fubp1	98	89.732	ENSHBUG00000009835	fubp1	100	89.962	Haplochromis_burtoni
ENSSMAG00000012029	fubp1	98	85.277	ENSHCOG00000000910	fubp1	100	85.423	Hippocampus_comes
ENSSMAG00000012029	fubp1	98	80.564	ENSIPUG00000009896	fubp1	100	78.667	Ictalurus_punctatus
ENSSMAG00000012029	fubp1	98	88.988	ENSKMAG00000018897	fubp1	100	88.839	Kryptolebias_marmoratus
ENSSMAG00000012029	fubp1	99	88.109	ENSLBEG00000012700	fubp1	99	88.395	Labrus_bergylta
ENSSMAG00000012029	fubp1	96	78.070	ENSLOCG00000003745	fubp1	99	76.901	Lepisosteus_oculatus
ENSSMAG00000012029	fubp1	62	50.556	ENSLAFG00000003273	FUBP1	99	66.555	Loxodonta_africana
ENSSMAG00000012029	fubp1	65	74.160	ENSMNEG00000045212	FUBP1	100	66.667	Macaca_nemestrina
ENSSMAG00000012029	fubp1	98	89.280	ENSMAMG00000007489	fubp1	99	88.987	Mastacembelus_armatus
ENSSMAG00000012029	fubp1	98	89.583	ENSMZEG00005024298	fubp1	100	89.732	Maylandia_zebra
ENSSMAG00000012029	fubp1	86	87.905	ENSMMOG00000019463	fubp1	99	84.471	Mola_mola
ENSSMAG00000012029	fubp1	98	90.327	ENSMALG00000015173	fubp1	100	90.327	Monopterus_albus
ENSSMAG00000012029	fubp1	65	77.143	MGP_CAROLIEiJ_G0025740	Fubp1	99	73.157	Mus_caroli
ENSSMAG00000012029	fubp1	65	76.923	ENSMUSG00000028034	Fubp1	99	72.968	Mus_musculus
ENSSMAG00000012029	fubp1	65	76.974	MGP_PahariEiJ_G0027191	Fubp1	99	73.019	Mus_pahari
ENSSMAG00000012029	fubp1	65	77.143	MGP_SPRETEiJ_G0026693	Fubp1	99	73.157	Mus_spretus
ENSSMAG00000012029	fubp1	91	94.872	ENSNBRG00000015099	fubp1	100	81.250	Neolamprologus_brichardi
ENSSMAG00000012029	fubp1	87	68.000	ENSOPRG00000001175	FUBP1	98	55.831	Ochotona_princeps
ENSSMAG00000012029	fubp1	86	54.027	ENSODEG00000003657	-	94	50.671	Octodon_degus
ENSSMAG00000012029	fubp1	98	89.701	ENSONIG00000018381	fubp1	97	89.851	Oreochromis_niloticus
ENSSMAG00000012029	fubp1	56	78.934	ENSOANG00000009777	FUBP1	99	67.038	Ornithorhynchus_anatinus
ENSSMAG00000012029	fubp1	98	80.000	ENSORLG00000003540	fubp1	99	79.851	Oryzias_latipes
ENSSMAG00000012029	fubp1	99	88.660	ENSORLG00020005908	fubp1	97	88.071	Oryzias_latipes_hni
ENSSMAG00000012029	fubp1	98	91.493	ENSORLG00015008779	fubp1	99	88.358	Oryzias_latipes_hsok
ENSSMAG00000012029	fubp1	99	90.574	ENSOMEG00000021943	fubp1	98	88.071	Oryzias_melastigma
ENSSMAG00000012029	fubp1	65	76.471	ENSOARG00000013259	FUBP1	100	69.141	Ovis_aries
ENSSMAG00000012029	fubp1	98	76.991	ENSPMGG00000009060	fubp1	99	78.125	Periophthalmus_magnuspinnatus
ENSSMAG00000012029	fubp1	58	59.825	ENSPMAG00000001644	-	93	59.389	Petromyzon_marinus
ENSSMAG00000012029	fubp1	98	89.435	ENSPFOG00000000238	fubp1	100	89.732	Poecilia_formosa
ENSSMAG00000012029	fubp1	98	81.548	ENSPLAG00000021170	fubp1	100	86.161	Poecilia_latipinna
ENSSMAG00000012029	fubp1	98	85.097	ENSPMEG00000004747	fubp1	99	91.148	Poecilia_mexicana
ENSSMAG00000012029	fubp1	98	89.435	ENSPREG00000017911	fubp1	100	89.732	Poecilia_reticulata
ENSSMAG00000012029	fubp1	71	76.170	ENSPPYG00000001219	-	68	77.243	Pongo_abelii
ENSSMAG00000012029	fubp1	90	73.404	ENSPCOG00000024974	FUBP1	100	66.522	Propithecus_coquereli
ENSSMAG00000012029	fubp1	98	89.583	ENSPNYG00000004552	fubp1	100	89.732	Pundamilia_nyererei
ENSSMAG00000012029	fubp1	98	83.211	ENSPNAG00000016207	fubp1	100	83.063	Pygocentrus_nattereri
ENSSMAG00000012029	fubp1	62	51.724	ENSSBOG00000027299	FUBP1	100	66.522	Saimiri_boliviensis_boliviensis
ENSSMAG00000012029	fubp1	77	51.149	ENSSHAG00000005367	FUBP1	99	67.517	Sarcophilus_harrisii
ENSSMAG00000012029	fubp1	97	81.493	ENSSFOG00015010213	fubp1	99	80.269	Scleropages_formosus
ENSSMAG00000012029	fubp1	100	89.828	ENSSDUG00000007383	fubp1	100	89.828	Seriola_dumerili
ENSSMAG00000012029	fubp1	100	89.828	ENSSLDG00000022863	fubp1	100	89.828	Seriola_lalandi_dorsalis
ENSSMAG00000012029	fubp1	80	72.202	ENSSARG00000011730	FUBP1	55	88.372	Sorex_araneus
ENSSMAG00000012029	fubp1	98	66.959	ENSSPUG00000008389	FUBP1	100	65.156	Sphenodon_punctatus
ENSSMAG00000012029	fubp1	98	94.196	ENSSPAG00000010161	fubp1	100	94.196	Stegastes_partitus
ENSSMAG00000012029	fubp1	98	84.827	ENSTRUG00000004615	fubp1	100	84.928	Takifugu_rubripes
ENSSMAG00000012029	fubp1	76	81.548	ENSTBEG00000017333	FUBP1	62	87.500	Tupaia_belangeri
ENSSMAG00000012029	fubp1	98	76.523	ENSXCOG00000019354	fubp1	100	77.386	Xiphophorus_couchianus
ENSSMAG00000012029	fubp1	89	90.984	ENSXMAG00000007168	fubp1	99	90.820	Xiphophorus_maculatus