EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSSMAG00000012073 (Gene tree)
Gene ID: -
Gene Symbol: r3hdm2
Alias: -
Full Name: R3H domain containing 2
Gene Type: protein_coding
Species: Scophthalmus_maximus
Status: putative
Strand: Minus strand
Length: 42758 bases
Position: chr6:8771688-8814445
Accession: ZDB-GENE-180313-1
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSMAP00000019889	R3H	PF01424.22	1.3e-10	1	1
ENSSMAP00000019710	R3H	PF01424.22	1.4e-10	1	1
ENSSMAP00000019821	R3H	PF01424.22	1.4e-10	1	1
ENSSMAP00000019659	R3H	PF01424.22	1.4e-10	1	1
ENSSMAP00000019755	R3H	PF01424.22	1.5e-10	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSMAT00000019953	-	4916	-	ENSSMAP00000019710	1057 (aa)	-	-
ENSSMAT00000020000	-	4862	-	ENSSMAP00000019755	1039 (aa)	-	-
ENSSMAT00000019902	-	4796	-	ENSSMAP00000019659	1051 (aa)	-	-
ENSSMAT00000020064	-	4763	-	ENSSMAP00000019821	1006 (aa)	-	-
ENSSMAT00000020133	-	2709	-	ENSSMAP00000019889	902 (aa)	-	-

Gene Model

Click here to download ENSSMAG00000012073's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSMAG00000012073's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSSMAG00000012073	r3hdm2	87	54.076	ENSSMAG00000001669	r3hdm1	64	54.396

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSMAG00000012073	r3hdm2	100	68.182	ENSG00000179912	R3HDM2	96	78.598	Homo_sapiens
ENSSMAG00000012073	r3hdm2	100	94.791	ENSAPOG00000020341	r3hdm2	100	94.791	Acanthochromis_polyacanthus
ENSSMAG00000012073	r3hdm2	99	65.648	ENSAMEG00000004812	R3HDM2	99	64.576	Ailuropoda_melanoleuca
ENSSMAG00000012073	r3hdm2	99	90.196	ENSACIG00000016146	r3hdm2	98	88.646	Amphilophus_citrinellus
ENSSMAG00000012073	r3hdm2	100	94.698	ENSAOCG00000023694	r3hdm2	100	94.698	Amphiprion_ocellaris
ENSSMAG00000012073	r3hdm2	100	93.974	ENSAPEG00000008851	r3hdm2	100	93.779	Amphiprion_percula
ENSSMAG00000012073	r3hdm2	100	92.054	ENSATEG00000025024	r3hdm2	100	92.442	Anabas_testudineus
ENSSMAG00000012073	r3hdm2	100	62.895	ENSACAG00000006388	R3HDM2	99	62.298	Anolis_carolinensis
ENSSMAG00000012073	r3hdm2	100	67.931	ENSANAG00000025397	-	99	64.626	Aotus_nancymaae
ENSSMAG00000012073	r3hdm2	100	63.231	ENSANAG00000031310	-	96	63.407	Aotus_nancymaae
ENSSMAG00000012073	r3hdm2	100	92.086	ENSACLG00000019106	r3hdm2	100	93.290	Astatotilapia_calliptera
ENSSMAG00000012073	r3hdm2	100	70.440	ENSAMXG00000017180	r3hdm2	99	71.130	Astyanax_mexicanus
ENSSMAG00000012073	r3hdm2	100	65.268	ENSBTAG00000018361	R3HDM2	99	64.300	Bos_taurus
ENSSMAG00000012073	r3hdm2	100	68.147	ENSCJAG00000007365	R3HDM2	99	64.140	Callithrix_jacchus
ENSSMAG00000012073	r3hdm2	100	65.449	ENSCAFG00000000215	R3HDM2	99	64.597	Canis_familiaris
ENSSMAG00000012073	r3hdm2	100	67.822	ENSCAFG00020023713	R3HDM2	99	65.327	Canis_lupus_dingo
ENSSMAG00000012073	r3hdm2	100	66.100	ENSCHIG00000014022	R3HDM2	99	64.925	Capra_hircus
ENSSMAG00000012073	r3hdm2	100	66.775	ENSTSYG00000001449	R3HDM2	99	64.167	Carlito_syrichta
ENSSMAG00000012073	r3hdm2	100	66.283	ENSCPOG00000009217	R3HDM2	99	65.949	Cavia_porcellus
ENSSMAG00000012073	r3hdm2	86	69.773	ENSCCAG00000026083	R3HDM2	99	65.111	Cebus_capucinus
ENSSMAG00000012073	r3hdm2	100	67.965	ENSCATG00000036929	R3HDM2	99	65.242	Cercocebus_atys
ENSSMAG00000012073	r3hdm2	100	65.553	ENSCLAG00000011997	R3HDM2	99	65.488	Chinchilla_lanigera
ENSSMAG00000012073	r3hdm2	99	65.482	ENSCSAG00000004911	R3HDM2	99	64.700	Chlorocebus_sabaeus
ENSSMAG00000012073	r3hdm2	73	66.331	ENSCHOG00000005636	R3HDM2	89	67.475	Choloepus_hoffmanni
ENSSMAG00000012073	r3hdm2	99	63.861	ENSCPBG00000013922	R3HDM2	99	63.562	Chrysemys_picta_bellii
ENSSMAG00000012073	r3hdm2	100	67.281	ENSCANG00000043807	R3HDM2	99	64.246	Colobus_angolensis_palliatus
ENSSMAG00000012073	r3hdm2	100	64.472	ENSCGRG00001017324	R3hdm2	99	62.192	Cricetulus_griseus_chok1gshd
ENSSMAG00000012073	r3hdm2	100	64.687	ENSCGRG00000003862	R3hdm2	99	62.192	Cricetulus_griseus_crigri
ENSSMAG00000012073	r3hdm2	100	92.930	ENSCSEG00000010925	r3hdm2	99	93.808	Cynoglossus_semilaevis
ENSSMAG00000012073	r3hdm2	100	89.867	ENSCVAG00000009058	r3hdm2	100	89.962	Cyprinodon_variegatus
ENSSMAG00000012073	r3hdm2	99	71.716	ENSDARG00000102610	r3hdm2	99	72.998	Danio_rerio
ENSSMAG00000012073	r3hdm2	99	64.359	ENSDNOG00000015033	R3HDM2	100	65.195	Dasypus_novemcinctus
ENSSMAG00000012073	r3hdm2	100	65.282	ENSDORG00000011462	R3hdm2	98	65.053	Dipodomys_ordii
ENSSMAG00000012073	r3hdm2	100	65.449	ENSEASG00005007091	R3HDM2	99	64.531	Equus_asinus_asinus
ENSSMAG00000012073	r3hdm2	100	65.582	ENSECAG00000003157	R3HDM2	99	64.772	Equus_caballus
ENSSMAG00000012073	r3hdm2	100	79.441	ENSELUG00000015969	r3hdm2	100	79.193	Esox_lucius
ENSSMAG00000012073	r3hdm2	100	67.857	ENSFCAG00000000192	R3HDM2	98	64.198	Felis_catus
ENSSMAG00000012073	r3hdm2	81	62.756	ENSFALG00000000255	R3HDM2	99	59.803	Ficedula_albicollis
ENSSMAG00000012073	r3hdm2	100	64.688	ENSFDAG00000019385	R3HDM2	99	64.438	Fukomys_damarensis
ENSSMAG00000012073	r3hdm2	100	90.689	ENSFHEG00000016484	r3hdm2	100	90.977	Fundulus_heteroclitus
ENSSMAG00000012073	r3hdm2	95	82.220	ENSGMOG00000007961	r3hdm2	100	82.087	Gadus_morhua
ENSSMAG00000012073	r3hdm2	99	63.628	ENSGALG00000043736	R3HDM2	99	62.983	Gallus_gallus
ENSSMAG00000012073	r3hdm2	100	91.155	ENSGAFG00000013887	r3hdm2	100	90.968	Gambusia_affinis
ENSSMAG00000012073	r3hdm2	95	91.061	ENSGACG00000006442	r3hdm2	100	90.069	Gasterosteus_aculeatus
ENSSMAG00000012073	r3hdm2	100	63.228	ENSGAGG00000017797	R3HDM2	99	61.977	Gopherus_agassizii
ENSSMAG00000012073	r3hdm2	100	67.965	ENSGGOG00000015007	R3HDM2	99	65.149	Gorilla_gorilla
ENSSMAG00000012073	r3hdm2	100	65.429	ENSHGLG00000010434	-	99	64.804	Heterocephalus_glaber_female
ENSSMAG00000012073	r3hdm2	94	61.168	ENSHGLG00000010421	-	97	60.925	Heterocephalus_glaber_female
ENSSMAG00000012073	r3hdm2	97	59.800	ENSHGLG00100018871	-	98	57.406	Heterocephalus_glaber_male
ENSSMAG00000012073	r3hdm2	100	64.995	ENSHGLG00100004183	-	99	64.711	Heterocephalus_glaber_male
ENSSMAG00000012073	r3hdm2	100	90.490	ENSHCOG00000001142	r3hdm2	97	90.010	Hippocampus_comes
ENSSMAG00000012073	r3hdm2	100	75.300	ENSIPUG00000023873	r3hdm2	100	75.392	Ictalurus_punctatus
ENSSMAG00000012073	r3hdm2	100	65.069	ENSSTOG00000013424	R3HDM2	99	59.462	Ictidomys_tridecemlineatus
ENSSMAG00000012073	r3hdm2	100	65.846	ENSJJAG00000010001	R3hdm2	99	64.837	Jaculus_jaculus
ENSSMAG00000012073	r3hdm2	100	91.381	ENSKMAG00000012695	r3hdm2	99	88.782	Kryptolebias_marmoratus
ENSSMAG00000012073	r3hdm2	100	95.189	ENSLBEG00000013115	r3hdm2	96	94.732	Labrus_bergylta
ENSSMAG00000012073	r3hdm2	50	40.108	ENSLBEG00000002779	-	59	46.237	Labrus_bergylta
ENSSMAG00000012073	r3hdm2	95	66.895	ENSLACG00000019064	r3hdm2	100	65.558	Latimeria_chalumnae
ENSSMAG00000012073	r3hdm2	99	74.347	ENSLOCG00000005976	r3hdm2	99	74.250	Lepisosteus_oculatus
ENSSMAG00000012073	r3hdm2	99	66.325	ENSLAFG00000006510	R3HDM2	99	65.640	Loxodonta_africana
ENSSMAG00000012073	r3hdm2	100	68.000	ENSMFAG00000036385	R3HDM2	99	64.624	Macaca_fascicularis
ENSSMAG00000012073	r3hdm2	100	68.000	ENSMMUG00000021789	R3HDM2	99	65.367	Macaca_mulatta
ENSSMAG00000012073	r3hdm2	100	67.888	ENSMNEG00000025314	R3HDM2	99	64.564	Macaca_nemestrina
ENSSMAG00000012073	r3hdm2	100	68.074	ENSMLEG00000028915	R3HDM2	99	65.335	Mandrillus_leucophaeus
ENSSMAG00000012073	r3hdm2	100	93.494	ENSMAMG00000009793	r3hdm2	100	93.791	Mastacembelus_armatus
ENSSMAG00000012073	r3hdm2	100	92.086	ENSMZEG00005007319	r3hdm2	100	93.290	Maylandia_zebra
ENSSMAG00000012073	r3hdm2	100	67.279	ENSMICG00000012389	R3HDM2	99	63.733	Microcebus_murinus
ENSSMAG00000012073	r3hdm2	100	64.361	ENSMOCG00000014425	R3hdm2	99	62.489	Microtus_ochrogaster
ENSSMAG00000012073	r3hdm2	100	91.432	ENSMMOG00000007448	r3hdm2	99	90.337	Mola_mola
ENSSMAG00000012073	r3hdm2	100	85.382	ENSMALG00000010211	r3hdm2	98	87.500	Monopterus_albus
ENSSMAG00000012073	r3hdm2	100	65.005	MGP_CAROLIEiJ_G0015896	R3hdm2	99	64.226	Mus_caroli
ENSSMAG00000012073	r3hdm2	100	65.393	ENSMUSG00000025404	R3hdm2	99	64.246	Mus_musculus
ENSSMAG00000012073	r3hdm2	100	64.638	MGP_PahariEiJ_G0031189	R3hdm2	99	64.146	Mus_pahari
ENSSMAG00000012073	r3hdm2	100	65.254	MGP_SPRETEiJ_G0016722	R3hdm2	99	64.167	Mus_spretus
ENSSMAG00000012073	r3hdm2	98	65.316	ENSMPUG00000001818	R3HDM2	96	64.131	Mustela_putorius_furo
ENSSMAG00000012073	r3hdm2	99	65.672	ENSMLUG00000004980	R3HDM2	99	65.209	Myotis_lucifugus
ENSSMAG00000012073	r3hdm2	100	65.477	ENSNGAG00000018800	R3hdm2	99	64.893	Nannospalax_galili
ENSSMAG00000012073	r3hdm2	100	89.286	ENSNBRG00000004483	r3hdm2	99	90.909	Neolamprologus_brichardi
ENSSMAG00000012073	r3hdm2	100	67.931	ENSNLEG00000017351	R3HDM2	99	64.744	Nomascus_leucogenys
ENSSMAG00000012073	r3hdm2	99	56.664	ENSMEUG00000008588	R3HDM2	99	55.514	Notamacropus_eugenii
ENSSMAG00000012073	r3hdm2	100	62.660	ENSOPRG00000013670	R3HDM2	99	58.130	Ochotona_princeps
ENSSMAG00000012073	r3hdm2	100	91.105	ENSONIG00000005075	r3hdm2	100	91.105	Oreochromis_niloticus
ENSSMAG00000012073	r3hdm2	99	65.367	ENSOCUG00000013258	R3HDM2	99	64.531	Oryctolagus_cuniculus
ENSSMAG00000012073	r3hdm2	100	89.096	ENSORLG00000005502	r3hdm2	100	88.537	Oryzias_latipes
ENSSMAG00000012073	r3hdm2	100	89.005	ENSORLG00020017069	r3hdm2	100	89.194	Oryzias_latipes_hni
ENSSMAG00000012073	r3hdm2	100	89.100	ENSORLG00015012735	r3hdm2	100	89.289	Oryzias_latipes_hsok
ENSSMAG00000012073	r3hdm2	99	85.281	ENSOMEG00000018079	r3hdm2	99	81.409	Oryzias_melastigma
ENSSMAG00000012073	r3hdm2	100	62.665	ENSOGAG00000012055	R3HDM2	99	62.059	Otolemur_garnettii
ENSSMAG00000012073	r3hdm2	96	57.969	ENSOGAG00000027966	-	95	58.628	Otolemur_garnettii
ENSSMAG00000012073	r3hdm2	100	65.481	ENSOARG00000006929	R3HDM2	99	63.883	Ovis_aries
ENSSMAG00000012073	r3hdm2	100	68.182	ENSPPAG00000034395	R3HDM2	99	65.335	Pan_paniscus
ENSSMAG00000012073	r3hdm2	100	67.857	ENSPPRG00000009240	R3HDM2	99	63.663	Panthera_pardus
ENSSMAG00000012073	r3hdm2	100	67.857	ENSPTIG00000008752	R3HDM2	99	63.663	Panthera_tigris_altaica
ENSSMAG00000012073	r3hdm2	100	68.108	ENSPTRG00000046457	R3HDM2	99	64.624	Pan_troglodytes
ENSSMAG00000012073	r3hdm2	100	68.074	ENSPANG00000024002	R3HDM2	97	67.040	Papio_anubis
ENSSMAG00000012073	r3hdm2	100	78.759	ENSPKIG00000003171	r3hdm2	100	79.680	Paramormyrops_kingsleyae
ENSSMAG00000012073	r3hdm2	63	55.521	ENSPSIG00000006954	R3HDM2	90	55.172	Pelodiscus_sinensis
ENSSMAG00000012073	r3hdm2	99	89.456	ENSPMGG00000007061	r3hdm2	99	88.470	Periophthalmus_magnuspinnatus
ENSSMAG00000012073	r3hdm2	100	64.084	ENSPEMG00000015964	R3hdm2	99	63.755	Peromyscus_maniculatus_bairdii
ENSSMAG00000012073	r3hdm2	100	66.093	ENSPCIG00000023841	R3HDM2	99	63.592	Phascolarctos_cinereus
ENSSMAG00000012073	r3hdm2	99	87.184	ENSPFOG00000006077	r3hdm2	92	87.520	Poecilia_formosa
ENSSMAG00000012073	r3hdm2	100	91.098	ENSPLAG00000002971	r3hdm2	100	91.296	Poecilia_latipinna
ENSSMAG00000012073	r3hdm2	100	91.098	ENSPMEG00000005330	r3hdm2	100	91.296	Poecilia_mexicana
ENSSMAG00000012073	r3hdm2	100	91.061	ENSPREG00000008424	r3hdm2	100	89.581	Poecilia_reticulata
ENSSMAG00000012073	r3hdm2	97	63.478	ENSPPYG00000004685	R3HDM2	80	59.208	Pongo_abelii
ENSSMAG00000012073	r3hdm2	88	80.144	ENSPCAG00000014642	R3HDM2	89	80.866	Procavia_capensis
ENSSMAG00000012073	r3hdm2	100	67.389	ENSPCOG00000013201	R3HDM2	99	63.981	Propithecus_coquereli
ENSSMAG00000012073	r3hdm2	99	65.890	ENSPVAG00000003967	R3HDM2	99	64.706	Pteropus_vampyrus
ENSSMAG00000012073	r3hdm2	99	81.524	ENSPNYG00000013479	r3hdm2	100	86.439	Pundamilia_nyererei
ENSSMAG00000012073	r3hdm2	100	75.068	ENSPNAG00000017473	r3hdm2	100	76.804	Pygocentrus_nattereri
ENSSMAG00000012073	r3hdm2	100	64.167	ENSRNOG00000007801	R3hdm2	99	63.848	Rattus_norvegicus
ENSSMAG00000012073	r3hdm2	100	63.560	ENSRBIG00000037403	R3HDM2	99	62.779	Rhinopithecus_bieti
ENSSMAG00000012073	r3hdm2	100	67.931	ENSRROG00000022271	R3HDM2	99	64.837	Rhinopithecus_roxellana
ENSSMAG00000012073	r3hdm2	100	68.147	ENSSBOG00000023547	R3HDM2	99	64.202	Saimiri_boliviensis_boliviensis
ENSSMAG00000012073	r3hdm2	99	63.173	ENSSHAG00000003511	R3HDM2	99	65.033	Sarcophilus_harrisii
ENSSMAG00000012073	r3hdm2	100	77.672	ENSSFOG00015011219	r3hdm2	99	78.306	Scleropages_formosus
ENSSMAG00000012073	r3hdm2	100	94.262	ENSSDUG00000019269	r3hdm2	100	94.073	Seriola_dumerili
ENSSMAG00000012073	r3hdm2	100	95.247	ENSSLDG00000005252	r3hdm2	100	95.247	Seriola_lalandi_dorsalis
ENSSMAG00000012073	r3hdm2	94	61.092	ENSSARG00000003958	R3HDM2	80	71.053	Sorex_araneus
ENSSMAG00000012073	r3hdm2	100	61.774	ENSSPUG00000014132	R3HDM2	99	60.667	Sphenodon_punctatus
ENSSMAG00000012073	r3hdm2	99	95.022	ENSSPAG00000022594	r3hdm2	100	95.022	Stegastes_partitus
ENSSMAG00000012073	r3hdm2	100	68.113	ENSSSCG00000026498	R3HDM2	100	65.419	Sus_scrofa
ENSSMAG00000012073	r3hdm2	72	63.648	ENSTGUG00000015881	R3HDM2	99	62.949	Taeniopygia_guttata
ENSSMAG00000012073	r3hdm2	100	89.382	ENSTRUG00000015075	r3hdm2	98	89.057	Takifugu_rubripes
ENSSMAG00000012073	r3hdm2	90	96.369	ENSTNIG00000007057	r3hdm2	90	96.610	Tetraodon_nigroviridis
ENSSMAG00000012073	r3hdm2	82	65.424	ENSTBEG00000015967	R3HDM2	78	65.085	Tupaia_belangeri
ENSSMAG00000012073	r3hdm2	92	65.127	ENSTTRG00000013082	R3HDM2	94	62.434	Tursiops_truncatus
ENSSMAG00000012073	r3hdm2	100	65.759	ENSUAMG00000020913	R3HDM2	99	64.546	Ursus_americanus
ENSSMAG00000012073	r3hdm2	96	67.416	ENSUMAG00000019179	R3HDM2	96	64.566	Ursus_maritimus
ENSSMAG00000012073	r3hdm2	90	80.984	ENSVPAG00000008656	R3HDM2	85	82.131	Vicugna_pacos
ENSSMAG00000012073	r3hdm2	93	67.430	ENSVVUG00000018014	R3HDM2	95	64.482	Vulpes_vulpes
ENSSMAG00000012073	r3hdm2	100	61.765	ENSXETG00000017153	r3hdm2	99	61.028	Xenopus_tropicalis
ENSSMAG00000012073	r3hdm2	92	89.307	ENSXCOG00000013882	r3hdm2	100	90.728	Xiphophorus_couchianus
ENSSMAG00000012073	r3hdm2	100	90.968	ENSXMAG00000017978	r3hdm2	100	91.163	Xiphophorus_maculatus