EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSSMAG00000012187 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Scophthalmus_maximus
Status: putative
Strand: Plus strand
Length: 6574 bases
Position: chr19:18204542-18211115
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSMAP00000019872	MMR_HSR1	PF01926.23	5.1e-18	1	2
ENSSMAP00000019872	MMR_HSR1	PF01926.23	5.1e-18	2	2
ENSSMAP00000019856	MMR_HSR1	PF01926.23	6e-18	1	2
ENSSMAP00000019856	MMR_HSR1	PF01926.23	6e-18	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSMAT00000020100	-	3939	-	ENSSMAP00000019856	966 (aa)	-	-
ENSSMAT00000020116	-	4274	-	ENSSMAP00000019872	931 (aa)	-	-

Gene Model

Click here to download ENSSMAG00000012187's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSMAG00000012187's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSSMAG00000012187	-	66	31.169	ENSSMAG00000004905	-	75	32.184
ENSSMAG00000012187	-	65	34.071	ENSSMAG00000003293	-	84	34.599
ENSSMAG00000012187	-	57	35.385	ENSSMAG00000012655	-	90	33.146
ENSSMAG00000012187	-	70	36.400	ENSSMAG00000018693	-	76	36.400
ENSSMAG00000012187	-	61	32.075	ENSSMAG00000003288	-	76	32.075
ENSSMAG00000012187	-	67	35.021	ENSSMAG00000011871	zgc:113625	95	35.021
ENSSMAG00000012187	-	68	31.727	ENSSMAG00000012958	-	70	31.174
ENSSMAG00000012187	-	54	38.462	ENSSMAG00000010389	-	83	36.879

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSMAG00000012187	-	69	34.571	ENSAPOG00000006502	-	59	34.651	Acanthochromis_polyacanthus
ENSSMAG00000012187	-	99	58.399	ENSAPOG00000019154	-	99	58.793	Acanthochromis_polyacanthus
ENSSMAG00000012187	-	64	63.107	ENSACIG00000007737	-	86	63.107	Amphilophus_citrinellus
ENSSMAG00000012187	-	61	39.409	ENSACIG00000009811	-	97	39.409	Amphilophus_citrinellus
ENSSMAG00000012187	-	59	61.972	ENSACIG00000007725	-	79	61.972	Amphilophus_citrinellus
ENSSMAG00000012187	-	70	36.967	ENSAOCG00000004579	-	90	36.967	Amphiprion_ocellaris
ENSSMAG00000012187	-	69	59.055	ENSAOCG00000003425	-	100	59.055	Amphiprion_ocellaris
ENSSMAG00000012187	-	68	39.568	ENSAPEG00000014403	-	86	39.379	Amphiprion_percula
ENSSMAG00000012187	-	99	62.236	ENSAPEG00000001491	-	100	62.800	Amphiprion_percula
ENSSMAG00000012187	-	66	69.159	ENSATEG00000023053	-	99	70.404	Anabas_testudineus
ENSSMAG00000012187	-	68	36.933	ENSATEG00000015654	-	82	36.933	Anabas_testudineus
ENSSMAG00000012187	-	70	39.286	ENSACLG00000014795	-	76	39.286	Astatotilapia_calliptera
ENSSMAG00000012187	-	59	38.587	ENSAMXG00000026085	-	88	39.381	Astyanax_mexicanus
ENSSMAG00000012187	-	70	39.907	ENSAMXG00000030744	-	98	40.000	Astyanax_mexicanus
ENSSMAG00000012187	-	72	34.293	ENSAMXG00000006064	-	84	34.293	Astyanax_mexicanus
ENSSMAG00000012187	-	71	40.141	ENSAMXG00000019109	-	99	40.141	Astyanax_mexicanus
ENSSMAG00000012187	-	58	39.106	ENSAMXG00000009216	-	93	39.106	Astyanax_mexicanus
ENSSMAG00000012187	-	69	43.915	ENSAMXG00000021387	-	69	43.915	Astyanax_mexicanus
ENSSMAG00000012187	-	68	34.928	ENSAMXG00000033117	-	97	34.498	Astyanax_mexicanus
ENSSMAG00000012187	-	98	59.593	ENSCSEG00000021519	-	100	59.724	Cynoglossus_semilaevis
ENSSMAG00000012187	-	68	63.370	ENSCVAG00000003054	-	94	63.370	Cyprinodon_variegatus
ENSSMAG00000012187	-	60	38.542	ENSCVAG00000005778	-	87	36.910	Cyprinodon_variegatus
ENSSMAG00000012187	-	70	36.299	ENSCVAG00000012268	-	95	36.299	Cyprinodon_variegatus
ENSSMAG00000012187	-	62	42.601	ENSDARG00000102683	CR626941.1	83	42.601	Danio_rerio
ENSSMAG00000012187	-	84	46.657	ENSDARG00000063481	si:ch211-214j24.15	82	46.657	Danio_rerio
ENSSMAG00000012187	-	59	52.910	ENSELUG00000024502	-	72	52.910	Esox_lucius
ENSSMAG00000012187	-	62	46.448	ENSELUG00000018192	-	98	45.946	Esox_lucius
ENSSMAG00000012187	-	60	33.503	ENSELUG00000003217	-	84	33.503	Esox_lucius
ENSSMAG00000012187	-	53	48.092	ENSELUG00000018709	-	71	40.957	Esox_lucius
ENSSMAG00000012187	-	65	69.811	ENSFHEG00000023334	-	85	69.811	Fundulus_heteroclitus
ENSSMAG00000012187	-	66	40.323	ENSFHEG00000020783	-	100	33.784	Fundulus_heteroclitus
ENSSMAG00000012187	-	56	61.236	ENSGMOG00000001626	-	100	61.236	Gadus_morhua
ENSSMAG00000012187	-	68	42.553	ENSGAFG00000020826	-	96	41.398	Gambusia_affinis
ENSSMAG00000012187	-	68	60.568	ENSHBUG00000008326	-	100	60.568	Haplochromis_burtoni
ENSSMAG00000012187	-	69	36.512	ENSHBUG00000001242	-	71	35.897	Haplochromis_burtoni
ENSSMAG00000012187	-	64	43.318	ENSHBUG00000016284	-	99	43.318	Haplochromis_burtoni
ENSSMAG00000012187	-	61	39.409	ENSIPUG00000013342	-	85	35.922	Ictalurus_punctatus
ENSSMAG00000012187	-	70	41.341	ENSKMAG00000014764	-	100	40.113	Kryptolebias_marmoratus
ENSSMAG00000012187	-	72	40.191	ENSKMAG00000004774	-	84	40.191	Kryptolebias_marmoratus
ENSSMAG00000012187	-	68	40.107	ENSKMAG00000014605	-	76	40.107	Kryptolebias_marmoratus
ENSSMAG00000012187	-	68	61.972	ENSKMAG00000009600	-	100	61.972	Kryptolebias_marmoratus
ENSSMAG00000012187	-	64	46.196	ENSLBEG00000019652	-	83	46.196	Labrus_bergylta
ENSSMAG00000012187	-	61	48.731	ENSLOCG00000000082	-	92	44.000	Lepisosteus_oculatus
ENSSMAG00000012187	-	59	46.597	ENSLOCG00000000385	-	80	46.597	Lepisosteus_oculatus
ENSSMAG00000012187	-	60	42.708	ENSLOCG00000012075	-	96	42.708	Lepisosteus_oculatus
ENSSMAG00000012187	-	58	44.865	ENSLOCG00000017852	-	82	44.865	Lepisosteus_oculatus
ENSSMAG00000012187	-	61	48.677	ENSLOCG00000018072	-	93	44.589	Lepisosteus_oculatus
ENSSMAG00000012187	-	59	47.312	ENSLOCG00000000517	-	78	47.312	Lepisosteus_oculatus
ENSSMAG00000012187	-	67	38.785	ENSLOCG00000016496	-	72	38.785	Lepisosteus_oculatus
ENSSMAG00000012187	-	70	36.607	ENSMAMG00000015600	-	81	37.481	Mastacembelus_armatus
ENSSMAG00000012187	-	67	67.442	ENSMAMG00000021970	-	97	67.442	Mastacembelus_armatus
ENSSMAG00000012187	-	99	59.544	ENSMAMG00000021969	-	100	59.544	Mastacembelus_armatus
ENSSMAG00000012187	-	61	67.299	ENSMMOG00000016864	-	93	68.720	Mola_mola
ENSSMAG00000012187	-	68	55.752	ENSMMOG00000016860	-	97	58.333	Mola_mola
ENSSMAG00000012187	-	70	40.260	ENSMMOG00000012876	-	73	40.260	Mola_mola
ENSSMAG00000012187	-	65	40.952	ENSNBRG00000002136	-	85	40.952	Neolamprologus_brichardi
ENSSMAG00000012187	-	69	37.995	ENSORLG00000002031	-	66	37.995	Oryzias_latipes
ENSSMAG00000012187	-	99	59.081	ENSORLG00000002537	-	99	59.153	Oryzias_latipes
ENSSMAG00000012187	-	63	39.175	ENSORLG00000028011	-	62	39.175	Oryzias_latipes
ENSSMAG00000012187	-	69	65.451	ENSORLG00020011284	-	83	65.684	Oryzias_latipes_hni
ENSSMAG00000012187	-	70	37.705	ENSORLG00020008323	-	66	37.705	Oryzias_latipes_hni
ENSSMAG00000012187	-	61	38.776	ENSORLG00020017387	-	90	38.776	Oryzias_latipes_hni
ENSSMAG00000012187	-	70	37.199	ENSORLG00020008286	-	85	37.199	Oryzias_latipes_hni
ENSSMAG00000012187	-	69	38.642	ENSORLG00015004522	-	64	38.642	Oryzias_latipes_hsok
ENSSMAG00000012187	-	54	41.209	ENSORLG00015023234	-	96	41.209	Oryzias_latipes_hsok
ENSSMAG00000012187	-	99	58.529	ENSORLG00015004110	-	99	58.606	Oryzias_latipes_hsok
ENSSMAG00000012187	-	69	66.013	ENSOMEG00000020433	-	91	65.458	Oryzias_melastigma
ENSSMAG00000012187	-	71	38.407	ENSOMEG00000010594	-	90	37.063	Oryzias_melastigma
ENSSMAG00000012187	-	68	47.034	ENSPKIG00000017688	-	85	47.034	Paramormyrops_kingsleyae
ENSSMAG00000012187	-	62	47.449	ENSPKIG00000017193	-	90	47.449	Paramormyrops_kingsleyae
ENSSMAG00000012187	-	60	38.728	ENSPMGG00000017993	-	92	38.728	Periophthalmus_magnuspinnatus
ENSSMAG00000012187	-	64	57.991	ENSPMGG00000014055	-	89	57.991	Periophthalmus_magnuspinnatus
ENSSMAG00000012187	-	61	60.000	ENSPMGG00000014056	-	84	60.000	Periophthalmus_magnuspinnatus
ENSSMAG00000012187	-	70	36.463	ENSPFOG00000015875	-	89	37.136	Poecilia_formosa
ENSSMAG00000012187	-	69	36.986	ENSPFOG00000015871	-	92	36.986	Poecilia_formosa
ENSSMAG00000012187	-	59	42.365	ENSPFOG00000005689	si:dkey-185m8.2	72	42.365	Poecilia_formosa
ENSSMAG00000012187	-	53	39.247	ENSPFOG00000022479	-	78	39.247	Poecilia_formosa
ENSSMAG00000012187	-	70	36.830	ENSPFOG00000013109	-	96	35.506	Poecilia_formosa
ENSSMAG00000012187	-	69	37.900	ENSPFOG00000013349	-	88	37.900	Poecilia_formosa
ENSSMAG00000012187	-	70	40.000	ENSPFOG00000015865	-	98	40.000	Poecilia_formosa
ENSSMAG00000012187	-	71	34.838	ENSPFOG00000012732	-	81	38.356	Poecilia_formosa
ENSSMAG00000012187	-	70	35.794	ENSPFOG00000022853	-	99	35.794	Poecilia_formosa
ENSSMAG00000012187	-	70	38.308	ENSPFOG00000016787	-	99	38.308	Poecilia_formosa
ENSSMAG00000012187	-	65	42.035	ENSPFOG00000000191	-	84	42.035	Poecilia_formosa
ENSSMAG00000012187	-	69	44.330	ENSPFOG00000006124	-	99	43.229	Poecilia_formosa
ENSSMAG00000012187	-	69	36.706	ENSPLAG00000020776	-	91	36.706	Poecilia_latipinna
ENSSMAG00000012187	-	56	43.386	ENSPLAG00000018911	-	70	42.246	Poecilia_latipinna
ENSSMAG00000012187	-	62	39.785	ENSPLAG00000018606	-	91	37.327	Poecilia_latipinna
ENSSMAG00000012187	-	62	38.172	ENSPLAG00000018664	-	84	38.172	Poecilia_latipinna
ENSSMAG00000012187	-	69	37.991	ENSPLAG00000003020	-	94	37.991	Poecilia_latipinna
ENSSMAG00000012187	-	51	43.382	ENSPLAG00000018692	-	83	43.846	Poecilia_latipinna
ENSSMAG00000012187	-	62	38.743	ENSPMEG00000006334	-	79	38.743	Poecilia_mexicana
ENSSMAG00000012187	-	70	38.298	ENSPMEG00000000604	-	75	38.298	Poecilia_mexicana
ENSSMAG00000012187	-	62	44.920	ENSPMEG00000018950	-	97	43.243	Poecilia_mexicana
ENSSMAG00000012187	-	71	38.085	ENSPMEG00000005912	-	82	37.500	Poecilia_mexicana
ENSSMAG00000012187	-	54	42.593	ENSPMEG00000010605	-	81	42.593	Poecilia_mexicana
ENSSMAG00000012187	-	68	38.909	ENSPMEG00000020297	-	95	38.909	Poecilia_mexicana
ENSSMAG00000012187	-	64	34.906	ENSPMEG00000000724	-	74	35.211	Poecilia_mexicana
ENSSMAG00000012187	-	51	40.854	ENSPMEG00000020252	-	78	40.854	Poecilia_mexicana
ENSSMAG00000012187	-	70	40.094	ENSPREG00000020440	-	80	40.094	Poecilia_reticulata
ENSSMAG00000012187	-	70	37.111	ENSPREG00000001530	-	78	37.813	Poecilia_reticulata
ENSSMAG00000012187	-	68	39.574	ENSPREG00000001250	-	96	39.574	Poecilia_reticulata
ENSSMAG00000012187	-	64	44.271	ENSPNYG00000010004	-	87	44.271	Pundamilia_nyererei
ENSSMAG00000012187	-	69	39.089	ENSPNAG00000013132	-	69	39.089	Pygocentrus_nattereri
ENSSMAG00000012187	-	66	47.162	ENSPNAG00000002097	-	91	47.162	Pygocentrus_nattereri
ENSSMAG00000012187	-	73	39.267	ENSPNAG00000014932	-	72	39.474	Pygocentrus_nattereri
ENSSMAG00000012187	-	67	39.076	ENSPNAG00000019899	-	92	39.076	Pygocentrus_nattereri
ENSSMAG00000012187	-	57	39.109	ENSPNAG00000025850	-	84	39.056	Pygocentrus_nattereri
ENSSMAG00000012187	-	67	32.105	ENSSFOG00015002503	-	95	32.432	Scleropages_formosus
ENSSMAG00000012187	-	61	42.051	ENSSFOG00015002420	-	77	42.051	Scleropages_formosus
ENSSMAG00000012187	-	66	33.333	ENSSFOG00015002507	-	98	33.333	Scleropages_formosus
ENSSMAG00000012187	-	68	71.429	ENSSDUG00000022299	-	94	71.429	Seriola_dumerili
ENSSMAG00000012187	-	99	70.469	ENSSLDG00000005786	-	100	70.570	Seriola_lalandi_dorsalis
ENSSMAG00000012187	-	69	43.889	ENSSLDG00000009168	-	98	39.912	Seriola_lalandi_dorsalis
ENSSMAG00000012187	-	71	39.716	ENSSLDG00000010531	-	96	39.716	Seriola_lalandi_dorsalis
ENSSMAG00000012187	-	58	47.312	ENSSPAG00000015927	-	78	47.312	Stegastes_partitus
ENSSMAG00000012187	-	72	64.463	ENSSPAG00000017616	-	97	64.463	Stegastes_partitus
ENSSMAG00000012187	-	68	61.088	ENSTRUG00000020422	-	85	60.996	Takifugu_rubripes
ENSSMAG00000012187	-	67	39.560	ENSTRUG00000018070	-	84	39.419	Takifugu_rubripes
ENSSMAG00000012187	-	61	85.185	ENSTNIG00000004220	-	93	85.185	Tetraodon_nigroviridis
ENSSMAG00000012187	-	67	58.150	ENSTNIG00000004275	-	99	58.150	Tetraodon_nigroviridis
ENSSMAG00000012187	-	64	38.739	ENSXCOG00000018421	-	95	38.739	Xiphophorus_couchianus
ENSSMAG00000012187	-	59	42.857	ENSXCOG00000009005	-	90	39.662	Xiphophorus_couchianus
ENSSMAG00000012187	-	73	35.682	ENSXMAG00000023360	-	86	35.682	Xiphophorus_maculatus