EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSSMAG00000012257 (Gene tree)
Gene ID: -
Gene Symbol: srrm4
Alias: ZnSR100|im:7136231|si:dkey-1k23.1
Full Name: serine/arginine repetitive matrix 4
Gene Type: protein_coding
Species: Scophthalmus_maximus
Status: putative
Strand: Plus strand
Length: 50632 bases
Position: chr9:21520492-21571123
Accession: ZDB-GENE-050208-34
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSMAP00000019987	SRRM_C	PF15230.6	4.3e-21	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSMAT00000020231	-	1293	-	ENSSMAP00000019987	430 (aa)	-	-

Gene Model

Click here to download ENSSMAG00000012257's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSMAG00000012257's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSMAG00000012257	srrm4	70	68.750	ENSACIG00000002171	srrm4	93	58.784	Amphilophus_citrinellus
ENSSMAG00000012257	srrm4	100	58.672	ENSATEG00000005330	srrm4	100	59.780	Anabas_testudineus
ENSSMAG00000012257	srrm4	99	59.170	ENSACLG00000023532	srrm4	98	59.170	Astatotilapia_calliptera
ENSSMAG00000012257	srrm4	69	61.538	ENSFHEG00000005091	srrm4	86	62.769	Fundulus_heteroclitus
ENSSMAG00000012257	srrm4	99	65.237	ENSMAMG00000004280	srrm4	98	62.754	Mastacembelus_armatus
ENSSMAG00000012257	srrm4	99	59.170	ENSMZEG00005021733	srrm4	98	59.170	Maylandia_zebra
ENSSMAG00000012257	srrm4	59	61.049	ENSMMOG00000000228	srrm4	99	59.243	Mola_mola
ENSSMAG00000012257	srrm4	99	62.260	ENSNBRG00000015313	srrm4	98	59.236	Neolamprologus_brichardi
ENSSMAG00000012257	srrm4	74	85.185	ENSORLG00000001177	srrm4	52	74.074	Oryzias_latipes
ENSSMAG00000012257	srrm4	73	85.526	ENSORLG00015019143	srrm4	51	71.852	Oryzias_latipes_hsok
ENSSMAG00000012257	srrm4	58	60.806	ENSPLAG00000002006	srrm4	79	58.559	Poecilia_latipinna
ENSSMAG00000012257	srrm4	69	60.436	ENSPMEG00000017802	srrm4	78	58.567	Poecilia_mexicana
ENSSMAG00000012257	srrm4	78	94.118	ENSPNYG00000007785	srrm4	98	58.405	Pundamilia_nyererei
ENSSMAG00000012257	srrm4	99	65.344	ENSSDUG00000017519	srrm4	99	68.615	Seriola_dumerili
ENSSMAG00000012257	srrm4	99	67.230	ENSSLDG00000015130	srrm4	97	66.808	Seriola_lalandi_dorsalis
ENSSMAG00000012257	srrm4	96	67.627	ENSSPAG00000016190	srrm4	99	70.997	Stegastes_partitus