EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSSMAG00000012368 (Gene tree)
Gene ID: -
Gene Symbol: rbm17
Alias: zgc:55840
Full Name: RNA binding motif protein 17
Gene Type: protein_coding
Species: Scophthalmus_maximus
Status: putative
Strand: Plus strand
Length: 16499 bases
Position: chr2:9270349-9286847
Accession: ZDB-GENE-040426-817
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSMAP00000020289	RRM_1	PF00076.22	7.3e-06	1	1
ENSSMAP00000020188	RRM_1	PF00076.22	9.4e-06	1	1
ENSSMAP00000020289	G-patch	PF01585.23	8.6e-13	1	1
ENSSMAP00000020188	G-patch	PF01585.23	8.9e-13	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSMAT00000020435	-	3638	-	ENSSMAP00000020188	432 (aa)	-	A0A2U9B1X4
ENSSMAT00000020536	-	1161	-	ENSSMAP00000020289	386 (aa)	-	-

Gene Model

Click here to download ENSSMAG00000012368's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSMAG00000012368's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSMAG00000012368	rbm17	100	77.861	ENSG00000134453	RBM17	100	78.713	Homo_sapiens
ENSSMAG00000012368	rbm17	99	89.486	ENSAPOG00000007101	rbm17	99	89.486	Acanthochromis_polyacanthus
ENSSMAG00000012368	rbm17	100	78.109	ENSAMEG00000002107	RBM17	100	78.960	Ailuropoda_melanoleuca
ENSSMAG00000012368	rbm17	100	86.667	ENSACIG00000006251	rbm17	100	86.667	Amphilophus_citrinellus
ENSSMAG00000012368	rbm17	100	89.583	ENSAOCG00000014892	rbm17	100	89.583	Amphiprion_ocellaris
ENSSMAG00000012368	rbm17	100	89.583	ENSAPEG00000022779	rbm17	100	89.583	Amphiprion_percula
ENSSMAG00000012368	rbm17	100	87.500	ENSATEG00000004406	rbm17	100	87.500	Anabas_testudineus
ENSSMAG00000012368	rbm17	100	78.358	ENSAPLG00000004190	RBM17	100	79.208	Anas_platyrhynchos
ENSSMAG00000012368	rbm17	90	74.874	ENSACAG00000005418	RBM17	99	75.067	Anolis_carolinensis
ENSSMAG00000012368	rbm17	100	68.408	ENSANAG00000019330	-	95	86.207	Aotus_nancymaae
ENSSMAG00000012368	rbm17	100	78.894	ENSANAG00000030127	RBM17	98	87.603	Aotus_nancymaae
ENSSMAG00000012368	rbm17	100	89.673	ENSACLG00000003928	rbm17	100	89.421	Astatotilapia_calliptera
ENSSMAG00000012368	rbm17	100	81.313	ENSAMXG00000005853	rbm17	100	84.635	Astyanax_mexicanus
ENSSMAG00000012368	rbm17	100	78.109	ENSBTAG00000021951	RBM17	100	78.960	Bos_taurus
ENSSMAG00000012368	rbm17	100	76.866	ENSBTAG00000011094	-	100	77.723	Bos_taurus
ENSSMAG00000012368	rbm17	75	30.909	WBGene00010233	F58B3.7	97	31.742	Caenorhabditis_elegans
ENSSMAG00000012368	rbm17	100	80.051	ENSCJAG00000020573	RBM17	100	81.170	Callithrix_jacchus
ENSSMAG00000012368	rbm17	100	78.109	ENSCAFG00000005206	RBM17	100	78.960	Canis_familiaris
ENSSMAG00000012368	rbm17	100	80.206	ENSCAFG00020005420	RBM17	100	81.330	Canis_lupus_dingo
ENSSMAG00000012368	rbm17	100	76.733	ENSCHIG00000019921	-	100	76.733	Capra_hircus
ENSSMAG00000012368	rbm17	100	80.362	ENSCHIG00000023204	-	100	80.362	Capra_hircus
ENSSMAG00000012368	rbm17	100	77.598	ENSTSYG00000001165	RBM17	99	88.983	Carlito_syrichta
ENSSMAG00000012368	rbm17	90	67.335	ENSCAPG00000006275	RBM17	100	68.091	Cavia_aperea
ENSSMAG00000012368	rbm17	100	79.487	ENSCPOG00000005679	RBM17	100	78.519	Cavia_porcellus
ENSSMAG00000012368	rbm17	100	78.358	ENSCCAG00000018655	RBM17	98	87.603	Cebus_capucinus
ENSSMAG00000012368	rbm17	100	80.103	ENSCATG00000041566	RBM17	95	89.831	Cercocebus_atys
ENSSMAG00000012368	rbm17	100	77.598	ENSCLAG00000012195	RBM17	99	78.133	Chinchilla_lanigera
ENSSMAG00000012368	rbm17	100	77.861	ENSCSAG00000013564	RBM17	100	78.713	Chlorocebus_sabaeus
ENSSMAG00000012368	rbm17	93	60.448	ENSCHOG00000005131	RBM17	100	60.858	Choloepus_hoffmanni
ENSSMAG00000012368	rbm17	100	77.612	ENSCPBG00000019836	RBM17	100	78.465	Chrysemys_picta_bellii
ENSSMAG00000012368	rbm17	100	43.675	ENSCSAVG00000008782	-	100	43.198	Ciona_savignyi
ENSSMAG00000012368	rbm17	100	77.612	ENSCANG00000030987	RBM17	95	89.831	Colobus_angolensis_palliatus
ENSSMAG00000012368	rbm17	97	73.475	ENSCANG00000023715	-	99	72.487	Colobus_angolensis_palliatus
ENSSMAG00000012368	rbm17	100	77.829	ENSCGRG00001013842	Rbm17	100	78.378	Cricetulus_griseus_chok1gshd
ENSSMAG00000012368	rbm17	100	65.553	ENSCGRG00001009256	-	100	63.224	Cricetulus_griseus_chok1gshd
ENSSMAG00000012368	rbm17	100	77.829	ENSCGRG00000006907	Rbm17	100	78.378	Cricetulus_griseus_crigri
ENSSMAG00000012368	rbm17	100	84.065	ENSCSEG00000018164	rbm17	100	84.065	Cynoglossus_semilaevis
ENSSMAG00000012368	rbm17	100	83.715	ENSCVAG00000002476	rbm17	100	82.045	Cyprinodon_variegatus
ENSSMAG00000012368	rbm17	100	78.009	ENSDARG00000031346	rbm17	100	78.009	Danio_rerio
ENSSMAG00000012368	rbm17	100	77.861	ENSDNOG00000035920	RBM17	100	78.713	Dasypus_novemcinctus
ENSSMAG00000012368	rbm17	99	37.393	FBgn0086683	Spf45	99	36.930	Drosophila_melanogaster
ENSSMAG00000012368	rbm17	89	84.834	ENSETEG00000006642	RBM17	86	84.834	Echinops_telfairi
ENSSMAG00000012368	rbm17	66	69.048	ENSEBUG00000010253	rbm17	86	69.048	Eptatretus_burgeri
ENSSMAG00000012368	rbm17	92	76.139	ENSEASG00005009236	-	100	76.139	Equus_asinus_asinus
ENSSMAG00000012368	rbm17	100	79.284	ENSEASG00005019205	-	100	79.284	Equus_asinus_asinus
ENSSMAG00000012368	rbm17	100	71.576	ENSECAG00000008939	RBM17	100	72.351	Equus_caballus
ENSSMAG00000012368	rbm17	100	69.307	ENSECAG00000001379	-	100	69.307	Equus_caballus
ENSSMAG00000012368	rbm17	87	60.638	ENSEEUG00000013077	RBM17	100	61.095	Erinaceus_europaeus
ENSSMAG00000012368	rbm17	100	83.636	ENSELUG00000006440	rbm17	100	83.636	Esox_lucius
ENSSMAG00000012368	rbm17	100	78.109	ENSFCAG00000031988	RBM17	100	78.960	Felis_catus
ENSSMAG00000012368	rbm17	100	77.363	ENSFALG00000001790	RBM17	100	78.218	Ficedula_albicollis
ENSSMAG00000012368	rbm17	100	77.598	ENSFDAG00000007470	RBM17	100	78.133	Fukomys_damarensis
ENSSMAG00000012368	rbm17	100	87.404	ENSFHEG00000001266	rbm17	100	87.661	Fundulus_heteroclitus
ENSSMAG00000012368	rbm17	99	80.742	ENSGMOG00000008438	rbm17	100	80.742	Gadus_morhua
ENSSMAG00000012368	rbm17	100	78.607	ENSGALG00000006332	RBM17	100	79.455	Gallus_gallus
ENSSMAG00000012368	rbm17	100	87.056	ENSGAFG00000019879	rbm17	100	87.310	Gambusia_affinis
ENSSMAG00000012368	rbm17	99	86.574	ENSGACG00000019174	rbm17	99	86.574	Gasterosteus_aculeatus
ENSSMAG00000012368	rbm17	100	77.612	ENSGAGG00000019906	RBM17	100	78.465	Gopherus_agassizii
ENSSMAG00000012368	rbm17	100	89.673	ENSHBUG00000016624	rbm17	100	89.421	Haplochromis_burtoni
ENSSMAG00000012368	rbm17	100	77.598	ENSHGLG00000011580	RBM17	100	78.133	Heterocephalus_glaber_female
ENSSMAG00000012368	rbm17	100	77.598	ENSHGLG00100010460	RBM17	100	78.133	Heterocephalus_glaber_male
ENSSMAG00000012368	rbm17	100	66.752	ENSHGLG00100010556	-	100	63.728	Heterocephalus_glaber_male
ENSSMAG00000012368	rbm17	99	84.884	ENSHCOG00000010865	rbm17	100	84.884	Hippocampus_comes
ENSSMAG00000012368	rbm17	100	79.861	ENSIPUG00000007699	Rbm17	100	81.750	Ictalurus_punctatus
ENSSMAG00000012368	rbm17	100	77.829	ENSSTOG00000013591	RBM17	100	78.378	Ictidomys_tridecemlineatus
ENSSMAG00000012368	rbm17	100	58.168	ENSJJAG00000000993	-	100	57.178	Jaculus_jaculus
ENSSMAG00000012368	rbm17	100	77.829	ENSJJAG00000022886	Rbm17	100	78.378	Jaculus_jaculus
ENSSMAG00000012368	rbm17	100	87.657	ENSKMAG00000021400	rbm17	100	87.909	Kryptolebias_marmoratus
ENSSMAG00000012368	rbm17	100	88.426	ENSLBEG00000000881	rbm17	100	88.426	Labrus_bergylta
ENSSMAG00000012368	rbm17	99	65.358	ENSLACG00000017297	RBM17	99	65.358	Latimeria_chalumnae
ENSSMAG00000012368	rbm17	100	79.853	ENSLOCG00000015659	rbm17	100	78.851	Lepisosteus_oculatus
ENSSMAG00000012368	rbm17	100	77.367	ENSLAFG00000011629	RBM17	100	77.751	Loxodonta_africana
ENSSMAG00000012368	rbm17	100	80.103	ENSMFAG00000035521	RBM17	95	89.831	Macaca_fascicularis
ENSSMAG00000012368	rbm17	100	77.861	ENSMMUG00000015152	RBM17	95	89.831	Macaca_mulatta
ENSSMAG00000012368	rbm17	100	80.103	ENSMNEG00000017264	RBM17	95	89.831	Macaca_nemestrina
ENSSMAG00000012368	rbm17	100	80.103	ENSMLEG00000029340	RBM17	95	89.831	Mandrillus_leucophaeus
ENSSMAG00000012368	rbm17	100	86.806	ENSMAMG00000000387	rbm17	100	86.806	Mastacembelus_armatus
ENSSMAG00000012368	rbm17	100	89.673	ENSMZEG00005015179	rbm17	100	89.421	Maylandia_zebra
ENSSMAG00000012368	rbm17	100	77.931	ENSMGAG00000003981	RBM17	100	78.293	Meleagris_gallopavo
ENSSMAG00000012368	rbm17	100	77.829	ENSMAUG00000019247	Rbm17	100	78.378	Mesocricetus_auratus
ENSSMAG00000012368	rbm17	100	78.392	ENSMICG00000003976	-	100	79.500	Microcebus_murinus
ENSSMAG00000012368	rbm17	100	72.082	ENSMICG00000041489	-	100	72.506	Microcebus_murinus
ENSSMAG00000012368	rbm17	100	77.829	ENSMOCG00000011847	Rbm17	100	78.378	Microtus_ochrogaster
ENSSMAG00000012368	rbm17	92	65.205	ENSMOCG00000014517	-	99	65.205	Microtus_ochrogaster
ENSSMAG00000012368	rbm17	100	81.663	ENSMMOG00000010264	rbm17	100	81.663	Mola_mola
ENSSMAG00000012368	rbm17	100	77.612	ENSMODG00000016648	RBM17	100	78.465	Monodelphis_domestica
ENSSMAG00000012368	rbm17	100	87.404	ENSMALG00000010597	rbm17	100	88.974	Monopterus_albus
ENSSMAG00000012368	rbm17	100	77.598	MGP_CAROLIEiJ_G0023173	Rbm17	100	78.378	Mus_caroli
ENSSMAG00000012368	rbm17	100	77.598	ENSMUSG00000037197	Rbm17	100	78.378	Mus_musculus
ENSSMAG00000012368	rbm17	100	78.060	MGP_PahariEiJ_G0019233	Rbm17	100	78.624	Mus_pahari
ENSSMAG00000012368	rbm17	100	77.598	MGP_SPRETEiJ_G0024091	Rbm17	100	78.378	Mus_spretus
ENSSMAG00000012368	rbm17	87	75.000	ENSMPUG00000016359	RBM17	96	76.657	Mustela_putorius_furo
ENSSMAG00000012368	rbm17	100	75.248	ENSMLUG00000025709	-	100	74.257	Myotis_lucifugus
ENSSMAG00000012368	rbm17	100	75.806	ENSMLUG00000002302	-	100	76.471	Myotis_lucifugus
ENSSMAG00000012368	rbm17	100	77.829	ENSNGAG00000000741	Rbm17	100	78.378	Nannospalax_galili
ENSSMAG00000012368	rbm17	100	57.623	ENSNGAG00000000663	-	100	57.801	Nannospalax_galili
ENSSMAG00000012368	rbm17	100	87.147	ENSNBRG00000018148	rbm17	100	88.946	Neolamprologus_brichardi
ENSSMAG00000012368	rbm17	100	78.338	ENSNLEG00000033350	RBM17	95	89.831	Nomascus_leucogenys
ENSSMAG00000012368	rbm17	100	72.388	ENSMEUG00000011347	RBM17	100	73.267	Notamacropus_eugenii
ENSSMAG00000012368	rbm17	100	69.727	ENSOPRG00000002993	RBM17	100	69.727	Ochotona_princeps
ENSSMAG00000012368	rbm17	97	61.719	ENSODEG00000007286	-	99	61.719	Octodon_degus
ENSSMAG00000012368	rbm17	100	77.650	ENSODEG00000004393	RBM17	100	77.941	Octodon_degus
ENSSMAG00000012368	rbm17	100	87.269	ENSONIG00000011838	rbm17	100	87.269	Oreochromis_niloticus
ENSSMAG00000012368	rbm17	100	76.179	ENSOANG00000015455	RBM17	100	77.778	Ornithorhynchus_anatinus
ENSSMAG00000012368	rbm17	100	87.626	ENSORLG00000028798	rbm17	100	87.879	Oryzias_latipes
ENSSMAG00000012368	rbm17	100	87.404	ENSORLG00020004593	rbm17	100	88.946	Oryzias_latipes_hni
ENSSMAG00000012368	rbm17	100	87.037	ENSORLG00015000033	rbm17	99	87.037	Oryzias_latipes_hsok
ENSSMAG00000012368	rbm17	100	87.037	ENSOMEG00000012060	rbm17	100	90.625	Oryzias_melastigma
ENSSMAG00000012368	rbm17	100	77.829	ENSOGAG00000015687	RBM17	100	78.624	Otolemur_garnettii
ENSSMAG00000012368	rbm17	100	78.109	ENSOARG00000012975	RBM17	100	78.960	Ovis_aries
ENSSMAG00000012368	rbm17	100	77.861	ENSPPAG00000032347	RBM17	95	89.831	Pan_paniscus
ENSSMAG00000012368	rbm17	100	78.109	ENSPPRG00000010706	RBM17	100	78.960	Panthera_pardus
ENSSMAG00000012368	rbm17	100	78.109	ENSPTIG00000007596	RBM17	100	78.960	Panthera_tigris_altaica
ENSSMAG00000012368	rbm17	100	77.861	ENSPTRG00000002265	RBM17	95	89.831	Pan_troglodytes
ENSSMAG00000012368	rbm17	100	80.103	ENSPANG00000023425	RBM17	95	89.831	Papio_anubis
ENSSMAG00000012368	rbm17	100	80.407	ENSPKIG00000005048	-	100	80.407	Paramormyrops_kingsleyae
ENSSMAG00000012368	rbm17	100	78.341	ENSPKIG00000025526	rbm17	100	77.931	Paramormyrops_kingsleyae
ENSSMAG00000012368	rbm17	100	76.790	ENSPSIG00000012332	RBM17	100	77.641	Pelodiscus_sinensis
ENSSMAG00000012368	rbm17	100	83.000	ENSPMGG00000007980	rbm17	100	83.000	Periophthalmus_magnuspinnatus
ENSSMAG00000012368	rbm17	100	77.829	ENSPEMG00000014320	Rbm17	100	78.378	Peromyscus_maniculatus_bairdii
ENSSMAG00000012368	rbm17	100	77.228	ENSPCIG00000019260	-	100	78.079	Phascolarctos_cinereus
ENSSMAG00000012368	rbm17	100	86.343	ENSPFOG00000013271	rbm17	100	86.343	Poecilia_formosa
ENSSMAG00000012368	rbm17	100	87.147	ENSPLAG00000004455	rbm17	100	87.404	Poecilia_latipinna
ENSSMAG00000012368	rbm17	100	86.343	ENSPMEG00000014864	rbm17	100	86.343	Poecilia_mexicana
ENSSMAG00000012368	rbm17	100	87.755	ENSPREG00000015589	rbm17	100	88.010	Poecilia_reticulata
ENSSMAG00000012368	rbm17	100	77.861	ENSPPYG00000002067	RBM17	100	78.713	Pongo_abelii
ENSSMAG00000012368	rbm17	99	57.541	ENSPPYG00000019881	-	100	59.137	Pongo_abelii
ENSSMAG00000012368	rbm17	82	54.366	ENSPPYG00000019042	-	100	56.467	Pongo_abelii
ENSSMAG00000012368	rbm17	100	70.398	ENSPCAG00000016879	RBM17	100	71.287	Procavia_capensis
ENSSMAG00000012368	rbm17	100	79.337	ENSPCOG00000027881	RBM17	100	80.457	Propithecus_coquereli
ENSSMAG00000012368	rbm17	100	71.464	ENSPVAG00000015499	RBM17	100	70.927	Pteropus_vampyrus
ENSSMAG00000012368	rbm17	100	85.751	ENSPNYG00000015274	rbm17	100	85.825	Pundamilia_nyererei
ENSSMAG00000012368	rbm17	100	79.724	ENSPNAG00000030046	rbm17	100	81.567	Pygocentrus_nattereri
ENSSMAG00000012368	rbm17	100	77.829	ENSRNOG00000018767	Rbm17	100	78.378	Rattus_norvegicus
ENSSMAG00000012368	rbm17	100	78.338	ENSRBIG00000043727	RBM17	95	89.831	Rhinopithecus_bieti
ENSSMAG00000012368	rbm17	100	80.103	ENSRROG00000044142	RBM17	95	89.831	Rhinopithecus_roxellana
ENSSMAG00000012368	rbm17	100	69.053	ENSSBOG00000023653	-	100	69.554	Saimiri_boliviensis_boliviensis
ENSSMAG00000012368	rbm17	100	79.795	ENSSBOG00000031661	-	92	90.351	Saimiri_boliviensis_boliviensis
ENSSMAG00000012368	rbm17	100	77.612	ENSSHAG00000012480	-	100	78.465	Sarcophilus_harrisii
ENSSMAG00000012368	rbm17	100	79.032	ENSSFOG00015009892	rbm17	100	79.032	Scleropages_formosus
ENSSMAG00000012368	rbm17	100	90.531	ENSSDUG00000015015	rbm17	100	90.531	Seriola_dumerili
ENSSMAG00000012368	rbm17	100	90.531	ENSSLDG00000014486	rbm17	100	90.531	Seriola_lalandi_dorsalis
ENSSMAG00000012368	rbm17	99	78.554	ENSSPUG00000001036	RBM17	99	79.404	Sphenodon_punctatus
ENSSMAG00000012368	rbm17	100	89.815	ENSSPAG00000002338	rbm17	100	89.815	Stegastes_partitus
ENSSMAG00000012368	rbm17	100	77.861	ENSSSCG00000011134	RBM17	100	78.713	Sus_scrofa
ENSSMAG00000012368	rbm17	100	77.136	ENSTGUG00000002013	RBM17	100	77.641	Taeniopygia_guttata
ENSSMAG00000012368	rbm17	100	85.648	ENSTRUG00000010698	rbm17	100	85.648	Takifugu_rubripes
ENSSMAG00000012368	rbm17	100	85.185	ENSTNIG00000006892	rbm17	100	85.185	Tetraodon_nigroviridis
ENSSMAG00000012368	rbm17	100	61.940	ENSTBEG00000014686	RBM17	100	64.604	Tupaia_belangeri
ENSSMAG00000012368	rbm17	91	76.020	ENSTTRG00000001344	RBM17	100	77.686	Tursiops_truncatus
ENSSMAG00000012368	rbm17	100	79.389	ENSUAMG00000009499	RBM17	100	80.506	Ursus_americanus
ENSSMAG00000012368	rbm17	100	80.620	ENSUMAG00000012237	RBM17	100	80.362	Ursus_maritimus
ENSSMAG00000012368	rbm17	100	69.403	ENSVPAG00000005497	RBM17	100	69.403	Vicugna_pacos
ENSSMAG00000012368	rbm17	100	80.206	ENSVVUG00000006780	RBM17	100	81.330	Vulpes_vulpes
ENSSMAG00000012368	rbm17	99	75.561	ENSXETG00000018123	rbm17	100	75.561	Xenopus_tropicalis
ENSSMAG00000012368	rbm17	100	86.111	ENSXMAG00000008674	rbm17	100	86.111	Xiphophorus_maculatus