EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSSMAG00000012378 (Gene tree)
Gene ID: -
Gene Symbol: znf646
Alias: si:rp71-1c10.2p|znf646p
Full Name: zinc finger protein 646
Gene Type: protein_coding
Species: Scophthalmus_maximus
Status: putative
Strand: Plus strand
Length: 5504 bases
Position: chr18:10586038-10591541
Accession: ZDB-GENE-160627-3
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSMAP00000020160	zf-C2H2	PF00096.26	4.5e-81	1	12
ENSSMAP00000020160	zf-C2H2	PF00096.26	4.5e-81	2	12
ENSSMAP00000020160	zf-C2H2	PF00096.26	4.5e-81	3	12
ENSSMAP00000020160	zf-C2H2	PF00096.26	4.5e-81	4	12
ENSSMAP00000020160	zf-C2H2	PF00096.26	4.5e-81	5	12
ENSSMAP00000020160	zf-C2H2	PF00096.26	4.5e-81	6	12
ENSSMAP00000020160	zf-C2H2	PF00096.26	4.5e-81	7	12
ENSSMAP00000020160	zf-C2H2	PF00096.26	4.5e-81	8	12
ENSSMAP00000020160	zf-C2H2	PF00096.26	4.5e-81	9	12
ENSSMAP00000020160	zf-C2H2	PF00096.26	4.5e-81	10	12
ENSSMAP00000020160	zf-C2H2	PF00096.26	4.5e-81	11	12
ENSSMAP00000020160	zf-C2H2	PF00096.26	4.5e-81	12	12
ENSSMAP00000020160	zf-met	PF12874.7	9e-15	1	2
ENSSMAP00000020160	zf-met	PF12874.7	9e-15	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSMAT00000020407	-	4801	-	ENSSMAP00000020160	1527 (aa)	-	-

Gene Model

Click here to download ENSSMAG00000012378's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSMAG00000012378's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSSMAG00000012378	znf646	75	32.389	ENSSMAG00000009685	-	85	40.000
ENSSMAG00000012378	znf646	99	40.164	ENSSMAG00000013663	-	96	40.870
ENSSMAG00000012378	znf646	98	34.021	ENSSMAG00000021271	-	68	34.021
ENSSMAG00000012378	znf646	72	31.776	ENSSMAG00000010087	znf652	61	32.075
ENSSMAG00000012378	znf646	72	35.455	ENSSMAG00000017045	-	62	31.933
ENSSMAG00000012378	znf646	86	33.636	ENSSMAG00000009020	znf526	88	33.333
ENSSMAG00000012378	znf646	77	32.540	ENSSMAG00000015041	si:dkey-7i4.5	93	32.540
ENSSMAG00000012378	znf646	72	35.780	ENSSMAG00000002031	-	58	35.780
ENSSMAG00000012378	znf646	94	40.152	ENSSMAG00000006197	-	99	40.152
ENSSMAG00000012378	znf646	98	34.884	ENSSMAG00000005081	-	78	34.884
ENSSMAG00000012378	znf646	99	34.783	ENSSMAG00000021251	-	94	38.889
ENSSMAG00000012378	znf646	99	31.092	ENSSMAG00000015282	-	85	34.375
ENSSMAG00000012378	znf646	87	30.973	ENSSMAG00000001190	PRDM15	57	30.973
ENSSMAG00000012378	znf646	76	38.043	ENSSMAG00000009115	-	87	46.552
ENSSMAG00000012378	znf646	59	37.037	ENSSMAG00000014720	e4f1	64	37.037
ENSSMAG00000012378	znf646	82	30.769	ENSSMAG00000014597	-	65	30.769
ENSSMAG00000012378	znf646	88	36.792	ENSSMAG00000019980	-	72	36.792
ENSSMAG00000012378	znf646	68	36.620	ENSSMAG00000000183	-	53	32.632
ENSSMAG00000012378	znf646	79	36.458	ENSSMAG00000006825	-	94	36.458
ENSSMAG00000012378	znf646	99	33.846	ENSSMAG00000015347	-	83	33.846
ENSSMAG00000012378	znf646	81	40.698	ENSSMAG00000009609	-	98	40.698
ENSSMAG00000012378	znf646	59	31.532	ENSSMAG00000000404	-	70	31.532
ENSSMAG00000012378	znf646	76	31.200	ENSSMAG00000007380	znf710b	58	31.200
ENSSMAG00000012378	znf646	50	35.398	ENSSMAG00000017501	-	50	35.398
ENSSMAG00000012378	znf646	71	31.154	ENSSMAG00000013828	-	62	40.741
ENSSMAG00000012378	znf646	74	42.708	ENSSMAG00000005076	-	97	44.444
ENSSMAG00000012378	znf646	73	37.705	ENSSMAG00000014844	-	88	37.705
ENSSMAG00000012378	znf646	98	37.179	ENSSMAG00000013291	-	99	35.616
ENSSMAG00000012378	znf646	87	42.500	ENSSMAG00000015356	-	87	42.105
ENSSMAG00000012378	znf646	54	41.593	ENSSMAG00000015181	gfi1b	54	41.593
ENSSMAG00000012378	znf646	76	36.975	ENSSMAG00000017485	-	52	41.026
ENSSMAG00000012378	znf646	99	35.000	ENSSMAG00000007561	znf236	75	35.000
ENSSMAG00000012378	znf646	62	31.765	ENSSMAG00000019949	-	79	41.270
ENSSMAG00000012378	znf646	86	35.833	ENSSMAG00000003594	-	88	35.833

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSMAG00000012378	znf646	100	79.713	ENSAPOG00000020151	znf646	100	79.713	Acanthochromis_polyacanthus
ENSSMAG00000012378	znf646	98	41.988	ENSAPOG00000018015	si:dkey-89b17.4	98	41.935	Acanthochromis_polyacanthus
ENSSMAG00000012378	znf646	98	84.422	ENSACIG00000023049	znf646	98	84.422	Amphilophus_citrinellus
ENSSMAG00000012378	znf646	100	39.071	ENSACIG00000001025	si:dkey-89b17.4	100	43.052	Amphilophus_citrinellus
ENSSMAG00000012378	znf646	98	41.757	ENSAOCG00000018684	si:dkey-89b17.4	98	41.935	Amphiprion_ocellaris
ENSSMAG00000012378	znf646	100	79.909	ENSAOCG00000012062	znf646	100	79.974	Amphiprion_ocellaris
ENSSMAG00000012378	znf646	100	43.513	ENSAPEG00000007719	si:dkey-89b17.4	100	43.688	Amphiprion_percula
ENSSMAG00000012378	znf646	100	79.974	ENSAPEG00000006427	znf646	100	80.039	Amphiprion_percula
ENSSMAG00000012378	znf646	100	82.092	ENSATEG00000015206	znf646	100	82.222	Anabas_testudineus
ENSSMAG00000012378	znf646	98	41.737	ENSATEG00000016814	si:dkey-89b17.4	98	41.968	Anabas_testudineus
ENSSMAG00000012378	znf646	100	78.272	ENSACLG00000012712	znf646	100	78.272	Astatotilapia_calliptera
ENSSMAG00000012378	znf646	98	41.306	ENSACLG00000016017	si:dkey-89b17.4	98	41.724	Astatotilapia_calliptera
ENSSMAG00000012378	znf646	100	54.334	ENSAMXG00000035525	znf646	100	54.774	Astyanax_mexicanus
ENSSMAG00000012378	znf646	99	39.520	ENSAMXG00000001155	si:dkey-89b17.4	99	40.603	Astyanax_mexicanus
ENSSMAG00000012378	znf646	100	55.769	ENSCSEG00000010769	si:dkey-89b17.4	100	38.986	Cynoglossus_semilaevis
ENSSMAG00000012378	znf646	100	66.248	ENSCSEG00000012389	znf646	100	66.322	Cynoglossus_semilaevis
ENSSMAG00000012378	znf646	98	41.416	ENSCVAG00000012420	si:dkey-89b17.4	98	42.000	Cyprinodon_variegatus
ENSSMAG00000012378	znf646	100	42.289	ENSDARG00000075545	si:dkey-89b17.4	85	65.517	Danio_rerio
ENSSMAG00000012378	znf646	100	54.333	ENSDARG00000061424	znf646	100	54.769	Danio_rerio
ENSSMAG00000012378	znf646	100	62.492	ENSELUG00000010423	znf646	100	62.748	Esox_lucius
ENSSMAG00000012378	znf646	99	40.522	ENSELUG00000015516	si:dkey-89b17.4	99	40.974	Esox_lucius
ENSSMAG00000012378	znf646	98	41.891	ENSFHEG00000019457	si:dkey-89b17.4	98	42.469	Fundulus_heteroclitus
ENSSMAG00000012378	znf646	99	52.579	ENSFHEG00000000561	znf646	100	53.108	Fundulus_heteroclitus
ENSSMAG00000012378	znf646	99	59.745	ENSGMOG00000016554	znf646	100	63.752	Gadus_morhua
ENSSMAG00000012378	znf646	70	55.952	ENSGAFG00000016353	-	88	55.952	Gambusia_affinis
ENSSMAG00000012378	znf646	98	41.441	ENSGAFG00000000345	si:dkey-89b17.4	98	41.963	Gambusia_affinis
ENSSMAG00000012378	znf646	99	56.173	ENSGACG00000008733	znf646	99	60.587	Gasterosteus_aculeatus
ENSSMAG00000012378	znf646	99	38.679	ENSGACG00000014714	si:dkey-89b17.4	100	44.318	Gasterosteus_aculeatus
ENSSMAG00000012378	znf646	100	78.403	ENSHBUG00000004840	znf646	100	78.403	Haplochromis_burtoni
ENSSMAG00000012378	znf646	98	41.230	ENSHBUG00000013093	si:dkey-89b17.4	98	41.724	Haplochromis_burtoni
ENSSMAG00000012378	znf646	99	60.879	ENSHCOG00000014890	znf646	100	60.948	Hippocampus_comes
ENSSMAG00000012378	znf646	100	42.822	ENSHCOG00000001901	si:dkey-89b17.4	100	43.362	Hippocampus_comes
ENSSMAG00000012378	znf646	99	39.410	ENSIPUG00000012845	si:dkey-89b17.4	99	40.698	Ictalurus_punctatus
ENSSMAG00000012378	znf646	50	62.406	ENSIPUG00000012830	-	86	62.406	Ictalurus_punctatus
ENSSMAG00000012378	znf646	99	54.085	ENSIPUG00000018102	znf646	99	54.338	Ictalurus_punctatus
ENSSMAG00000012378	znf646	98	47.273	ENSKMAG00000014037	si:dkey-89b17.4	96	42.757	Kryptolebias_marmoratus
ENSSMAG00000012378	znf646	99	70.778	ENSKMAG00000011982	znf646	100	71.042	Kryptolebias_marmoratus
ENSSMAG00000012378	znf646	100	78.827	ENSLBEG00000016562	znf646	100	79.153	Labrus_bergylta
ENSSMAG00000012378	znf646	98	41.507	ENSLBEG00000020291	si:dkey-89b17.4	98	41.846	Labrus_bergylta
ENSSMAG00000012378	znf646	99	37.713	ENSLOCG00000003238	si:dkey-89b17.4	99	37.983	Lepisosteus_oculatus
ENSSMAG00000012378	znf646	98	42.029	ENSMAMG00000009604	si:dkey-89b17.4	98	41.901	Mastacembelus_armatus
ENSSMAG00000012378	znf646	100	84.107	ENSMAMG00000009313	znf646	100	84.107	Mastacembelus_armatus
ENSSMAG00000012378	znf646	100	78.207	ENSMZEG00005011264	znf646	100	78.207	Maylandia_zebra
ENSSMAG00000012378	znf646	98	41.306	ENSMZEG00005003901	si:dkey-89b17.4	98	41.724	Maylandia_zebra
ENSSMAG00000012378	znf646	99	75.814	ENSMMOG00000002311	znf646	99	75.977	Mola_mola
ENSSMAG00000012378	znf646	92	55.769	ENSMMOG00000012741	si:dkey-89b17.4	100	42.884	Mola_mola
ENSSMAG00000012378	znf646	100	43.220	ENSMALG00000019558	si:dkey-89b17.4	100	43.185	Monopterus_albus
ENSSMAG00000012378	znf646	99	43.668	ENSMALG00000002274	-	99	44.323	Monopterus_albus
ENSSMAG00000012378	znf646	100	78.207	ENSNBRG00000022534	znf646	100	78.207	Neolamprologus_brichardi
ENSSMAG00000012378	znf646	100	43.270	ENSNBRG00000020314	si:dkey-89b17.4	100	43.615	Neolamprologus_brichardi
ENSSMAG00000012378	znf646	99	51.376	ENSONIG00000019947	-	100	60.448	Oreochromis_niloticus
ENSSMAG00000012378	znf646	99	37.700	ENSONIG00000009324	si:dkey-89b17.4	99	45.270	Oreochromis_niloticus
ENSSMAG00000012378	znf646	98	43.734	ENSORLG00000024255	si:dkey-89b17.4	100	43.540	Oryzias_latipes
ENSSMAG00000012378	znf646	100	65.075	ENSORLG00000007885	znf646	100	65.075	Oryzias_latipes
ENSSMAG00000012378	znf646	100	65.447	ENSORLG00020010285	znf646	100	65.382	Oryzias_latipes_hni
ENSSMAG00000012378	znf646	100	65.382	ENSORLG00015008733	znf646	100	65.317	Oryzias_latipes_hsok
ENSSMAG00000012378	znf646	98	56.364	ENSOMEG00000020587	si:dkey-89b17.4	98	56.364	Oryzias_melastigma
ENSSMAG00000012378	znf646	100	63.898	ENSOMEG00000015658	znf646	99	63.898	Oryzias_melastigma
ENSSMAG00000012378	znf646	100	48.175	ENSPMGG00000004639	znf646	99	48.175	Periophthalmus_magnuspinnatus
ENSSMAG00000012378	znf646	85	47.028	ENSPMGG00000015931	-	88	47.270	Periophthalmus_magnuspinnatus
ENSSMAG00000012378	znf646	99	39.794	ENSPFOG00000004826	-	99	39.394	Poecilia_formosa
ENSSMAG00000012378	znf646	98	41.818	ENSPFOG00000008241	si:dkey-89b17.4	100	43.521	Poecilia_formosa
ENSSMAG00000012378	znf646	99	41.440	ENSPLAG00000010454	-	100	42.773	Poecilia_latipinna
ENSSMAG00000012378	znf646	98	41.970	ENSPLAG00000011382	si:dkey-89b17.4	98	42.258	Poecilia_latipinna
ENSSMAG00000012378	znf646	98	41.818	ENSPMEG00000000141	si:dkey-89b17.4	98	42.105	Poecilia_mexicana
ENSSMAG00000012378	znf646	100	41.444	ENSPMEG00000018283	znf646	99	41.509	Poecilia_mexicana
ENSSMAG00000012378	znf646	98	55.952	ENSPREG00000017637	znf646	98	45.643	Poecilia_reticulata
ENSSMAG00000012378	znf646	98	41.940	ENSPREG00000012579	si:dkey-89b17.4	98	42.154	Poecilia_reticulata
ENSSMAG00000012378	znf646	100	78.469	ENSPNYG00000017692	znf646	100	78.469	Pundamilia_nyererei
ENSSMAG00000012378	znf646	98	41.230	ENSPNYG00000011901	si:dkey-89b17.4	98	41.724	Pundamilia_nyererei
ENSSMAG00000012378	znf646	100	55.220	ENSPNAG00000000750	znf646	100	55.521	Pygocentrus_nattereri
ENSSMAG00000012378	znf646	99	52.427	ENSPNAG00000022072	si:dkey-89b17.4	99	40.681	Pygocentrus_nattereri
ENSSMAG00000012378	znf646	100	37.475	ENSSFOG00015004737	si:dkey-89b17.4	100	40.621	Scleropages_formosus
ENSSMAG00000012378	znf646	98	41.577	ENSSDUG00000015931	si:dkey-89b17.4	98	41.737	Seriola_dumerili
ENSSMAG00000012378	znf646	100	88.278	ENSSDUG00000002675	znf646	100	88.278	Seriola_dumerili
ENSSMAG00000012378	znf646	98	41.501	ENSSLDG00000012415	si:dkey-89b17.4	98	41.660	Seriola_lalandi_dorsalis
ENSSMAG00000012378	znf646	100	87.950	ENSSLDG00000018521	znf646	100	87.950	Seriola_lalandi_dorsalis
ENSSMAG00000012378	znf646	98	41.583	ENSSPAG00000018810	si:dkey-89b17.4	98	41.871	Stegastes_partitus
ENSSMAG00000012378	znf646	100	80.548	ENSSPAG00000016701	znf646	100	80.744	Stegastes_partitus
ENSSMAG00000012378	znf646	100	69.608	ENSTRUG00000025597	znf646	100	69.739	Takifugu_rubripes
ENSSMAG00000012378	znf646	97	55.769	ENSTRUG00000020495	si:dkey-89b17.4	100	43.797	Takifugu_rubripes
ENSSMAG00000012378	znf646	99	36.156	ENSTNIG00000001159	si:dkey-89b17.4	99	37.361	Tetraodon_nigroviridis
ENSSMAG00000012378	znf646	99	52.273	ENSTNIG00000000073	znf646	99	46.070	Tetraodon_nigroviridis
ENSSMAG00000012378	znf646	92	42.677	ENSXCOG00000002714	-	94	44.094	Xiphophorus_couchianus
ENSSMAG00000012378	znf646	95	48.384	ENSXCOG00000001645	si:dkey-89b17.4	100	43.071	Xiphophorus_couchianus
ENSSMAG00000012378	znf646	100	41.147	ENSXMAG00000024528	si:dkey-89b17.4	100	43.071	Xiphophorus_maculatus
ENSSMAG00000012378	znf646	98	42.992	ENSXMAG00000018743	-	94	43.465	Xiphophorus_maculatus