EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSSMAG00000012449 (Gene tree)
Gene ID: -
Gene Symbol: tsen54
Alias: zgc:109927
Full Name: TSEN54 tRNA splicing endonuclease subunit
Gene Type: protein_coding
Species: Scophthalmus_maximus
Status: putative
Strand: Plus strand
Length: 6209 bases
Position: chr19:18501741-18507949
Accession: ZDB-GENE-050522-454
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSMAP00000020352	tRNA_int_end_N2	PF12928.7	5.2e-20	1	1
ENSSMAP00000020284	tRNA_int_end_N2	PF12928.7	2.7e-12	1	1
ENSSMAP00000020300	tRNA_int_end_N2	PF12928.7	2.8e-12	1	1
ENSSMAP00000020326	tRNA_int_end_N2	PF12928.7	3.1e-12	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSMAT00000020531	-	4305	-	ENSSMAP00000020284	435 (aa)	-	-
ENSSMAT00000020574	-	2273	-	ENSSMAP00000020326	488 (aa)	-	-
ENSSMAT00000020599	-	1832	-	ENSSMAP00000020352	513 (aa)	-	A0A2U9CU82
ENSSMAT00000020547	-	2195	-	ENSSMAP00000020300	462 (aa)	-	-

Gene Model

Click here to download ENSSMAG00000012449's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSMAG00000012449's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSMAG00000012449	tsen54	99	43.629	ENSG00000182173	TSEN54	97	65.714	Homo_sapiens
ENSSMAG00000012449	tsen54	98	73.242	ENSAPOG00000009659	tsen54	99	69.393	Acanthochromis_polyacanthus
ENSSMAG00000012449	tsen54	97	44.168	ENSAMEG00000009414	TSEN54	98	43.551	Ailuropoda_melanoleuca
ENSSMAG00000012449	tsen54	98	72.868	ENSAOCG00000000152	tsen54	95	72.852	Amphiprion_ocellaris
ENSSMAG00000012449	tsen54	98	72.481	ENSAPEG00000018931	tsen54	94	72.461	Amphiprion_percula
ENSSMAG00000012449	tsen54	98	71.073	ENSATEG00000019860	tsen54	97	71.017	Anabas_testudineus
ENSSMAG00000012449	tsen54	99	44.671	ENSAPLG00000009419	TSEN54	99	45.154	Anas_platyrhynchos
ENSSMAG00000012449	tsen54	99	43.629	ENSANAG00000024061	TSEN54	97	43.833	Aotus_nancymaae
ENSSMAG00000012449	tsen54	98	71.068	ENSACLG00000019800	tsen54	97	70.874	Astatotilapia_calliptera
ENSSMAG00000012449	tsen54	98	57.059	ENSAMXG00000006546	tsen54	97	57.647	Astyanax_mexicanus
ENSSMAG00000012449	tsen54	99	43.629	ENSCJAG00000014278	TSEN54	97	43.654	Callithrix_jacchus
ENSSMAG00000012449	tsen54	99	43.152	ENSCAFG00000004798	TSEN54	98	43.045	Canis_familiaris
ENSSMAG00000012449	tsen54	99	43.152	ENSCAFG00020000312	TSEN54	98	43.045	Canis_lupus_dingo
ENSSMAG00000012449	tsen54	99	43.536	ENSCHIG00000019908	TSEN54	81	61.340	Capra_hircus
ENSSMAG00000012449	tsen54	99	41.124	ENSTSYG00000037439	TSEN54	99	41.866	Carlito_syrichta
ENSSMAG00000012449	tsen54	99	43.762	ENSCCAG00000036624	TSEN54	97	43.462	Cebus_capucinus
ENSSMAG00000012449	tsen54	99	43.080	ENSCATG00000042877	TSEN54	97	43.833	Cercocebus_atys
ENSSMAG00000012449	tsen54	97	44.294	ENSCLAG00000002924	TSEN54	96	42.885	Chinchilla_lanigera
ENSSMAG00000012449	tsen54	99	43.822	ENSCSAG00000004809	TSEN54	98	44.253	Chlorocebus_sabaeus
ENSSMAG00000012449	tsen54	100	45.591	ENSCPBG00000028071	TSEN54	98	45.873	Chrysemys_picta_bellii
ENSSMAG00000012449	tsen54	99	44.275	ENSCANG00000028053	TSEN54	71	60.448	Colobus_angolensis_palliatus
ENSSMAG00000012449	tsen54	99	43.021	ENSCGRG00001020029	Tsen54	98	42.802	Cricetulus_griseus_chok1gshd
ENSSMAG00000012449	tsen54	99	40.535	ENSCGRG00000016289	Tsen54	99	40.315	Cricetulus_griseus_crigri
ENSSMAG00000012449	tsen54	96	57.176	ENSCSEG00000020586	tsen54	99	56.706	Cynoglossus_semilaevis
ENSSMAG00000012449	tsen54	97	55.634	ENSDARG00000036844	tsen54	100	55.738	Danio_rerio
ENSSMAG00000012449	tsen54	99	43.856	ENSDNOG00000018452	TSEN54	98	42.669	Dasypus_novemcinctus
ENSSMAG00000012449	tsen54	99	44.530	ENSDORG00000004073	Tsen54	97	44.338	Dipodomys_ordii
ENSSMAG00000012449	tsen54	98	31.758	ENSEBUG00000005203	TSEN54	73	46.541	Eptatretus_burgeri
ENSSMAG00000012449	tsen54	98	60.491	ENSELUG00000017703	tsen54	90	60.152	Esox_lucius
ENSSMAG00000012449	tsen54	99	43.478	ENSFCAG00000023712	TSEN54	98	43.702	Felis_catus
ENSSMAG00000012449	tsen54	99	43.764	ENSFALG00000001119	TSEN54	93	46.232	Ficedula_albicollis
ENSSMAG00000012449	tsen54	99	42.763	ENSFDAG00000019090	TSEN54	99	42.424	Fukomys_damarensis
ENSSMAG00000012449	tsen54	98	69.625	ENSFHEG00000005470	tsen54	97	69.094	Fundulus_heteroclitus
ENSSMAG00000012449	tsen54	76	66.355	ENSGMOG00000013146	tsen54	96	60.440	Gadus_morhua
ENSSMAG00000012449	tsen54	99	41.685	ENSGALG00000047163	TSEN54	96	42.886	Gallus_gallus
ENSSMAG00000012449	tsen54	98	68.701	ENSGAFG00000005111	tsen54	97	67.520	Gambusia_affinis
ENSSMAG00000012449	tsen54	97	64.892	ENSGACG00000014987	tsen54	99	64.497	Gasterosteus_aculeatus
ENSSMAG00000012449	tsen54	98	47.547	ENSGAGG00000006825	TSEN54	96	47.115	Gopherus_agassizii
ENSSMAG00000012449	tsen54	97	44.227	ENSGGOG00000009417	TSEN54	99	44.163	Gorilla_gorilla
ENSSMAG00000012449	tsen54	89	69.957	ENSHBUG00000018296	tsen54	89	69.099	Haplochromis_burtoni
ENSSMAG00000012449	tsen54	97	44.382	ENSHGLG00000007979	TSEN54	96	41.366	Heterocephalus_glaber_female
ENSSMAG00000012449	tsen54	99	41.720	ENSHGLG00100005497	TSEN54	96	40.417	Heterocephalus_glaber_male
ENSSMAG00000012449	tsen54	97	61.737	ENSHCOG00000007481	tsen54	99	61.033	Hippocampus_comes
ENSSMAG00000012449	tsen54	98	51.473	ENSIPUG00000000590	tsen54	97	52.456	Ictalurus_punctatus
ENSSMAG00000012449	tsen54	99	42.964	ENSSTOG00000012883	TSEN54	98	42.226	Ictidomys_tridecemlineatus
ENSSMAG00000012449	tsen54	99	44.762	ENSJJAG00000007365	Tsen54	98	44.677	Jaculus_jaculus
ENSSMAG00000012449	tsen54	98	70.077	ENSKMAG00000006944	tsen54	97	68.726	Kryptolebias_marmoratus
ENSSMAG00000012449	tsen54	98	67.969	ENSLBEG00000004199	tsen54	97	67.383	Labrus_bergylta
ENSSMAG00000012449	tsen54	98	42.337	ENSLACG00000009497	TSEN54	99	41.731	Latimeria_chalumnae
ENSSMAG00000012449	tsen54	98	53.759	ENSLOCG00000011191	tsen54	97	54.440	Lepisosteus_oculatus
ENSSMAG00000012449	tsen54	99	41.907	ENSLAFG00000011655	TSEN54	92	43.487	Loxodonta_africana
ENSSMAG00000012449	tsen54	99	43.822	ENSMFAG00000000712	TSEN54	98	44.253	Macaca_fascicularis
ENSSMAG00000012449	tsen54	99	43.822	ENSMNEG00000029199	TSEN54	98	44.253	Macaca_nemestrina
ENSSMAG00000012449	tsen54	99	41.629	ENSMLEG00000044168	TSEN54	88	42.266	Mandrillus_leucophaeus
ENSSMAG00000012449	tsen54	98	71.992	ENSMAMG00000019773	tsen54	97	71.739	Mastacembelus_armatus
ENSSMAG00000012449	tsen54	98	70.680	ENSMZEG00005000884	tsen54	97	70.485	Maylandia_zebra
ENSSMAG00000012449	tsen54	99	42.634	ENSMGAG00000009556	TSEN54	93	43.625	Meleagris_gallopavo
ENSSMAG00000012449	tsen54	99	44.359	ENSMAUG00000016838	Tsen54	98	44.190	Mesocricetus_auratus
ENSSMAG00000012449	tsen54	99	44.101	ENSMICG00000044012	TSEN54	97	45.000	Microcebus_murinus
ENSSMAG00000012449	tsen54	97	62.257	ENSMMOG00000020189	tsen54	99	61.961	Mola_mola
ENSSMAG00000012449	tsen54	99	42.486	ENSMODG00000007438	TSEN54	96	42.642	Monodelphis_domestica
ENSSMAG00000012449	tsen54	98	72.374	ENSMALG00000020573	tsen54	97	72.179	Monopterus_albus
ENSSMAG00000012449	tsen54	99	43.071	MGP_CAROLIEiJ_G0017417	Tsen54	97	42.697	Mus_caroli
ENSSMAG00000012449	tsen54	99	43.258	ENSMUSG00000020781	Tsen54	79	60.714	Mus_musculus
ENSSMAG00000012449	tsen54	99	43.494	MGP_PahariEiJ_G0018547	Tsen54	97	38.026	Mus_pahari
ENSSMAG00000012449	tsen54	99	43.071	MGP_SPRETEiJ_G0018262	Tsen54	79	60.714	Mus_spretus
ENSSMAG00000012449	tsen54	97	42.912	ENSMPUG00000013870	TSEN54	96	43.156	Mustela_putorius_furo
ENSSMAG00000012449	tsen54	99	42.524	ENSMLUG00000015298	TSEN54	97	42.035	Myotis_lucifugus
ENSSMAG00000012449	tsen54	99	44.316	ENSNGAG00000015673	Tsen54	97	44.316	Nannospalax_galili
ENSSMAG00000012449	tsen54	99	38.546	ENSMEUG00000011908	TSEN54	99	38.641	Notamacropus_eugenii
ENSSMAG00000012449	tsen54	99	41.412	ENSOPRG00000012513	TSEN54	97	40.226	Ochotona_princeps
ENSSMAG00000012449	tsen54	98	71.124	ENSONIG00000009543	tsen54	97	70.930	Oreochromis_niloticus
ENSSMAG00000012449	tsen54	99	40.840	ENSOCUG00000009875	TSEN54	97	41.176	Oryctolagus_cuniculus
ENSSMAG00000012449	tsen54	98	62.622	ENSORLG00000000852	tsen54	97	61.057	Oryzias_latipes
ENSSMAG00000012449	tsen54	98	60.624	ENSORLG00020018221	tsen54	97	61.252	Oryzias_latipes_hni
ENSSMAG00000012449	tsen54	98	60.311	ENSORLG00015009413	tsen54	92	67.133	Oryzias_latipes_hsok
ENSSMAG00000012449	tsen54	98	62.279	ENSOMEG00000014402	tsen54	94	61.176	Oryzias_melastigma
ENSSMAG00000012449	tsen54	99	44.571	ENSOGAG00000001442	TSEN54	97	44.038	Otolemur_garnettii
ENSSMAG00000012449	tsen54	99	40.716	ENSOARG00000010361	TSEN54	99	40.087	Ovis_aries
ENSSMAG00000012449	tsen54	99	42.793	ENSPPAG00000043519	TSEN54	99	44.356	Pan_paniscus
ENSSMAG00000012449	tsen54	99	43.478	ENSPPRG00000009162	TSEN54	98	43.702	Panthera_pardus
ENSSMAG00000012449	tsen54	99	41.463	ENSPTIG00000019312	TSEN54	96	41.866	Panthera_tigris_altaica
ENSSMAG00000012449	tsen54	99	43.822	ENSPTRG00000009646	TSEN54	98	43.762	Pan_troglodytes
ENSSMAG00000012449	tsen54	99	43.629	ENSPANG00000020133	TSEN54	97	44.061	Papio_anubis
ENSSMAG00000012449	tsen54	98	53.690	ENSPKIG00000023018	tsen54	99	52.927	Paramormyrops_kingsleyae
ENSSMAG00000012449	tsen54	97	43.287	ENSPSIG00000012807	TSEN54	100	42.056	Pelodiscus_sinensis
ENSSMAG00000012449	tsen54	99	42.212	ENSPMGG00000019578	tsen54	99	44.939	Periophthalmus_magnuspinnatus
ENSSMAG00000012449	tsen54	99	43.258	ENSPEMG00000014857	Tsen54	75	62.644	Peromyscus_maniculatus_bairdii
ENSSMAG00000012449	tsen54	98	67.906	ENSPFOG00000022740	tsen54	97	67.123	Poecilia_formosa
ENSSMAG00000012449	tsen54	98	67.653	ENSPLAG00000014847	tsen54	97	66.864	Poecilia_latipinna
ENSSMAG00000012449	tsen54	98	67.850	ENSPMEG00000022876	tsen54	97	67.061	Poecilia_mexicana
ENSSMAG00000012449	tsen54	98	67.653	ENSPREG00000013090	tsen54	97	67.061	Poecilia_reticulata
ENSSMAG00000012449	tsen54	99	42.438	ENSPPYG00000008629	TSEN54	91	54.144	Pongo_abelii
ENSSMAG00000012449	tsen54	65	71.429	ENSPCAG00000002093	TSEN54	74	65.333	Procavia_capensis
ENSSMAG00000012449	tsen54	99	42.214	ENSPCOG00000027880	TSEN54	98	43.846	Propithecus_coquereli
ENSSMAG00000012449	tsen54	99	68.514	ENSPNYG00000010217	tsen54	99	69.384	Pundamilia_nyererei
ENSSMAG00000012449	tsen54	98	55.490	ENSPNAG00000003770	tsen54	97	56.164	Pygocentrus_nattereri
ENSSMAG00000012449	tsen54	99	43.178	ENSRNOG00000004598	Tsen54	97	43.822	Rattus_norvegicus
ENSSMAG00000012449	tsen54	99	44.466	ENSRBIG00000043040	TSEN54	71	61.194	Rhinopithecus_bieti
ENSSMAG00000012449	tsen54	99	44.466	ENSRROG00000030797	TSEN54	83	41.907	Rhinopithecus_roxellana
ENSSMAG00000012449	tsen54	99	40.927	ENSSBOG00000013543	TSEN54	97	41.176	Saimiri_boliviensis_boliviensis
ENSSMAG00000012449	tsen54	99	41.839	ENSSHAG00000018127	TSEN54	97	41.132	Sarcophilus_harrisii
ENSSMAG00000012449	tsen54	96	53.162	ENSSFOG00015004093	tsen54	99	53.162	Scleropages_formosus
ENSSMAG00000012449	tsen54	98	76.265	ENSSDUG00000021506	tsen54	97	76.265	Seriola_dumerili
ENSSMAG00000012449	tsen54	98	76.265	ENSSLDG00000016303	tsen54	97	76.265	Seriola_lalandi_dorsalis
ENSSMAG00000012449	tsen54	80	43.488	ENSSPUG00000008988	TSEN54	96	42.553	Sphenodon_punctatus
ENSSMAG00000012449	tsen54	96	64.352	ENSSPAG00000008047	tsen54	99	63.785	Stegastes_partitus
ENSSMAG00000012449	tsen54	99	69.731	ENSSPAG00000008098	-	99	71.255	Stegastes_partitus
ENSSMAG00000012449	tsen54	97	44.423	ENSSSCG00000036852	TSEN54	96	43.333	Sus_scrofa
ENSSMAG00000012449	tsen54	99	44.743	ENSTGUG00000008548	TSEN54	99	44.444	Taeniopygia_guttata
ENSSMAG00000012449	tsen54	98	64.637	ENSTRUG00000004230	tsen54	97	63.851	Takifugu_rubripes
ENSSMAG00000012449	tsen54	98	62.818	ENSTNIG00000011281	tsen54	98	61.942	Tetraodon_nigroviridis
ENSSMAG00000012449	tsen54	99	42.198	ENSTTRG00000015828	TSEN54	99	41.525	Tursiops_truncatus
ENSSMAG00000012449	tsen54	96	41.216	ENSUAMG00000010045	TSEN54	82	57.971	Ursus_americanus
ENSSMAG00000012449	tsen54	99	41.630	ENSUMAG00000008979	TSEN54	99	40.481	Ursus_maritimus
ENSSMAG00000012449	tsen54	99	43.258	ENSVVUG00000011411	TSEN54	97	43.595	Vulpes_vulpes
ENSSMAG00000012449	tsen54	99	43.595	ENSXETG00000012532	tsen54	99	51.829	Xenopus_tropicalis
ENSSMAG00000012449	tsen54	97	62.529	ENSXCOG00000018245	tsen54	99	61.827	Xiphophorus_couchianus
ENSSMAG00000012449	tsen54	98	67.850	ENSXMAG00000018818	tsen54	97	66.667	Xiphophorus_maculatus