EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSSMAG00000012543 (Gene tree)
Gene ID: -
Gene Symbol: rabl6b
Alias: si:ch211-102c2.5
Full Name: RAB%2C member RAS oncogene family-like 6b
Gene Type: protein_coding
Species: Scophthalmus_maximus
Status: putative
Strand: Plus strand
Length: 16161 bases
Position: chr9:12227815-12243975
Accession: ZDB-GENE-081104-97
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSMAP00000020517	MMR_HSR1	PF01926.23	7.9e-05	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSMAT00000020751	-	5899	-	ENSSMAP00000020501	704 (aa)	-	-
ENSSMAT00000020791	-	5818	-	ENSSMAP00000020540	754 (aa)	-	-
ENSSMAT00000020768	-	5869	-	ENSSMAP00000020517	694 (aa)	-	-
ENSSMAT00000020814	-	5706	-	ENSSMAP00000020563	754 (aa)	-	-
ENSSMAT00000020835	-	2130	-	ENSSMAP00000020583	709 (aa)	-	-

Gene Model

Click here to download ENSSMAG00000012543's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSMAG00000012543's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSMAG00000012543	rabl6b	96	79.491	ENSACIG00000010721	rabl6b	88	80.152	Amphilophus_citrinellus
ENSSMAG00000012543	rabl6b	96	87.237	ENSATEG00000012055	rabl6b	88	87.443	Anabas_testudineus
ENSSMAG00000012543	rabl6b	99	79.119	ENSCSEG00000012430	-	99	79.830	Cynoglossus_semilaevis
ENSSMAG00000012543	rabl6b	95	80.626	ENSCSEG00000016135	rabl6b	87	81.231	Cynoglossus_semilaevis
ENSSMAG00000012543	rabl6b	95	68.254	ENSELUG00000004448	rabl6b	90	74.943	Esox_lucius
ENSSMAG00000012543	rabl6b	97	78.158	ENSGAFG00000013561	rabl6b	100	78.661	Gambusia_affinis
ENSSMAG00000012543	rabl6b	96	81.493	ENSGACG00000005242	rabl6b	88	81.024	Gasterosteus_aculeatus
ENSSMAG00000012543	rabl6b	96	85.886	ENSHBUG00000014235	rabl6b	88	86.233	Haplochromis_burtoni
ENSSMAG00000012543	rabl6b	96	63.338	ENSIPUG00000019266	rabl6	88	63.623	Ictalurus_punctatus
ENSSMAG00000012543	rabl6b	90	57.704	ENSLOCG00000001402	rabl6b	79	83.984	Lepisosteus_oculatus
ENSSMAG00000012543	rabl6b	96	80.660	ENSMAMG00000019516	rabl6b	88	80.665	Mastacembelus_armatus
ENSSMAG00000012543	rabl6b	68	74.947	ENSMZEG00005003942	rabl6b	99	75.368	Maylandia_zebra
ENSSMAG00000012543	rabl6b	68	75.000	ENSMMOG00000009459	rabl6b	97	72.727	Mola_mola
ENSSMAG00000012543	rabl6b	97	87.500	ENSMALG00000002029	rabl6b	88	87.727	Monopterus_albus
ENSSMAG00000012543	rabl6b	68	76.000	ENSNBRG00000012512	rabl6b	99	76.211	Neolamprologus_brichardi
ENSSMAG00000012543	rabl6b	96	84.708	ENSONIG00000010408	rabl6b	88	85.000	Oreochromis_niloticus
ENSSMAG00000012543	rabl6b	96	78.338	ENSORLG00020017557	rabl6b	88	78.711	Oryzias_latipes_hni
ENSSMAG00000012543	rabl6b	96	77.712	ENSORLG00015007848	rabl6b	91	78.378	Oryzias_latipes_hsok
ENSSMAG00000012543	rabl6b	95	79.970	ENSOMEG00000022840	rabl6b	95	80.000	Oryzias_melastigma
ENSSMAG00000012543	rabl6b	96	63.235	ENSPKIG00000007459	RABL6	86	64.392	Paramormyrops_kingsleyae
ENSSMAG00000012543	rabl6b	96	59.331	ENSPCIG00000023722	RABL6	90	58.014	Phascolarctos_cinereus
ENSSMAG00000012543	rabl6b	95	83.434	ENSPFOG00000003250	rabl6b	88	84.091	Poecilia_formosa
ENSSMAG00000012543	rabl6b	95	83.283	ENSPLAG00000019562	rabl6b	88	83.939	Poecilia_latipinna
ENSSMAG00000012543	rabl6b	95	83.584	ENSPMEG00000020472	rabl6b	88	84.242	Poecilia_mexicana
ENSSMAG00000012543	rabl6b	97	84.101	ENSPREG00000014116	rabl6b	93	84.545	Poecilia_reticulata
ENSSMAG00000012543	rabl6b	96	63.623	ENSSFOG00015013414	-	88	64.804	Scleropages_formosus
ENSSMAG00000012543	rabl6b	96	66.018	ENSSFOG00015017388	RABL6	89	67.012	Scleropages_formosus
ENSSMAG00000012543	rabl6b	95	92.857	ENSSDUG00000006564	rabl6b	88	92.857	Seriola_dumerili
ENSSMAG00000012543	rabl6b	96	88.922	ENSSPAG00000021033	rabl6b	95	89.697	Stegastes_partitus
ENSSMAG00000012543	rabl6b	99	75.783	ENSTNIG00000010595	rabl6b	93	77.049	Tetraodon_nigroviridis