EuRBPDB

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  • Description
  • RBDs
  • Transcripts
  • Gene Model
  • PPI
  • Paralogs
  • Orthologs
Description
Ensembl ID
ENSSMAG00000012618 (Gene tree)
Gene ID
-
Gene Symbol
rbfox3b
Alias
rbfox3l|si:ch73-322f21.1
Full Name
RNA binding fox-1 homolog 3b
Gene Type
protein_coding
Species
Scophthalmus_maximus
Status
putative
Strand
Minus strand
Length
215712 bases
Position
chr19:18627891-18843602
Accession
ZDB-GENE-091204-46
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
ENSSMAP00000020633Fox-1_CPF12414.87e-4311
ENSSMAP00000020607Fox-1_CPF12414.87.2e-4311
ENSSMAP00000020579Fox-1_CPF12414.89e-4311
ENSSMAP00000020561Fox-1_CPF12414.89.9e-4311
ENSSMAP00000020579RRM_1PF00076.222.2e-1811
ENSSMAP00000020561RRM_1PF00076.222.3e-1811
ENSSMAP00000020633RRM_1PF00076.222.4e-1811
ENSSMAP00000020607RRM_1PF00076.220.000211
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
ENSSMAT00000020812-6094-ENSSMAP00000020561459 (aa)--
ENSSMAT00000020830-6040-ENSSMAP00000020579441 (aa)--
ENSSMAT00000020884-1422-ENSSMAP00000020633473 (aa)--
ENSSMAT00000020858-6001-ENSSMAP00000020607428 (aa)--
Gene Model
Click here to download ENSSMAG00000012618's gene model file
Protein-Protein Interaction (PPI)

Clik here to download ENSSMAG00000012618's network
Paralogs
Ensembl IDGene SymbolCoverageIdentiy ParalogGene SymbolCoverageIdentiy
ENSSMAG00000012618rbfox3b8871.429ENSSMAG00000019052-10078.248
ENSSMAG00000012618rbfox3b7865.746ENSSMAG00000015505rbfox19466.947
ENSSMAG00000012618rbfox3b7555.556ENSSMAG00000013090rbfox1l6673.171
ENSSMAG00000012618rbfox3b5063.241ENSSMAG00000004317-8751.134
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
ENSSMAG00000012618rbfox3b7176.266ENSG00000167281RBFOX39989.231Homo_sapiens
ENSSMAG00000012618rbfox3b8795.052ENSAPOG00000021630rbfox3b10091.106Acanthochromis_polyacanthus
ENSSMAG00000012618rbfox3b7765.497ENSAPOG00000015658-9062.534Acanthochromis_polyacanthus
ENSSMAG00000012618rbfox3b7872.802ENSAMEG00000014170RBFOX39969.951Ailuropoda_melanoleuca
ENSSMAG00000012618rbfox3b7590.274ENSACIG00000010817rbfox3b10090.060Amphilophus_citrinellus
ENSSMAG00000012618rbfox3b7466.764ENSACIG00000003768-9067.055Amphilophus_citrinellus
ENSSMAG00000012618rbfox3b8869.133ENSAOCG00000010786-9571.053Amphiprion_ocellaris
ENSSMAG00000012618rbfox3b8795.052ENSAOCG00000012358rbfox3b10095.052Amphiprion_ocellaris
ENSSMAG00000012618rbfox3b7771.429ENSAPEG00000015891-9168.394Amphiprion_percula
ENSSMAG00000012618rbfox3b8181.616ENSAPEG00000019081rbfox3b9379.558Amphiprion_percula
ENSSMAG00000012618rbfox3b7583.287ENSATEG00000019945rbfox3b10082.873Anabas_testudineus
ENSSMAG00000012618rbfox3b7175.079ENSATEG00000023101-9774.925Anabas_testudineus
ENSSMAG00000012618rbfox3b7876.945ENSACAG00000016093RBFOX39675.900Anolis_carolinensis
ENSSMAG00000012618rbfox3b7175.949ENSANAG00000023457RBFOX310077.946Aotus_nancymaae
ENSSMAG00000012618rbfox3b8871.100ENSACLG00000025552-9971.355Astatotilapia_calliptera
ENSSMAG00000012618rbfox3b8794.286ENSACLG00000020011rbfox3b10093.333Astatotilapia_calliptera
ENSSMAG00000012618rbfox3b8780.662ENSAMXG00000037246rbfox3a9882.319Astyanax_mexicanus
ENSSMAG00000012618rbfox3b8777.519ENSAMXG00000042841rbfox3b9482.029Astyanax_mexicanus
ENSSMAG00000012618rbfox3b6177.491ENSBTAG00000006280RBFOX310065.994Bos_taurus
ENSSMAG00000012618rbfox3b7171.429ENSCJAG00000009563RBFOX310068.254Callithrix_jacchus
ENSSMAG00000012618rbfox3b5584.711ENSCAFG00000005547RBFOX310079.433Canis_familiaris
ENSSMAG00000012618rbfox3b7165.289ENSCAFG00020008126RBFOX310069.388Canis_lupus_dingo
ENSSMAG00000012618rbfox3b7165.289ENSCHIG00000009124RBFOX310069.388Capra_hircus
ENSSMAG00000012618rbfox3b7165.385ENSTSYG00000029617RBFOX310068.602Carlito_syrichta
ENSSMAG00000012618rbfox3b7166.667ENSCPOG00000021703RBFOX310068.608Cavia_porcellus
ENSSMAG00000012618rbfox3b7175.949ENSCCAG00000028450RBFOX310077.946Cebus_capucinus
ENSSMAG00000012618rbfox3b7176.266ENSCATG00000018349RBFOX310078.248Cercocebus_atys
ENSSMAG00000012618rbfox3b7167.033ENSCLAG00000006449RBFOX310068.957Chinchilla_lanigera
ENSSMAG00000012618rbfox3b7176.266ENSCSAG00000002355RBFOX310078.248Chlorocebus_sabaeus
ENSSMAG00000012618rbfox3b7780.294ENSCPBG00000010904RBFOX310079.635Chrysemys_picta_bellii
ENSSMAG00000012618rbfox3b7176.266ENSCANG00000043120RBFOX310078.248Colobus_angolensis_palliatus
ENSSMAG00000012618rbfox3b7165.205ENSCGRG00001019476Rbfox310068.528Cricetulus_griseus_chok1gshd
ENSSMAG00000012618rbfox3b7165.205ENSCGRG00000003268Rbfox310068.528Cricetulus_griseus_crigri
ENSSMAG00000012618rbfox3b8776.364ENSCSEG00000015567RBFOX39876.031Cynoglossus_semilaevis
ENSSMAG00000012618rbfox3b7871.758ENSCSEG00000020606RBFOX39768.267Cynoglossus_semilaevis
ENSSMAG00000012618rbfox3b8795.052ENSCVAG00000006882rbfox3b10095.052Cyprinodon_variegatus
ENSSMAG00000012618rbfox3b7574.848ENSDARG00000074310rbfox3b9692.670Danio_rerio
ENSSMAG00000012618rbfox3b8780.153ENSDARG00000010083rbfox3a10081.934Danio_rerio
ENSSMAG00000012618rbfox3b5866.557ENSDNOG00000039391RBFOX38188.333Dasypus_novemcinctus
ENSSMAG00000012618rbfox3b7267.742ENSDORG00000005352Rbfox310062.821Dipodomys_ordii
ENSSMAG00000012618rbfox3b6754.276ENSEBUG00000013559RBFOX38053.618Eptatretus_burgeri
ENSSMAG00000012618rbfox3b7764.888ENSEBUG00000002129RBFOX39967.027Eptatretus_burgeri
ENSSMAG00000012618rbfox3b7176.415ENSEASG00005005059RBFOX310078.078Equus_asinus_asinus
ENSSMAG00000012618rbfox3b7176.101ENSECAG00000023811RBFOX310077.778Equus_caballus
ENSSMAG00000012618rbfox3b6278.824ENSEEUG00000013974RBFOX37688.000Erinaceus_europaeus
ENSSMAG00000012618rbfox3b8790.625ENSELUG00000017963rbfox3b10089.323Esox_lucius
ENSSMAG00000012618rbfox3b7875.504ENSFCAG00000002555RBFOX310078.261Felis_catus
ENSSMAG00000012618rbfox3b7965.526ENSFALG00000012288RBFOX39961.520Ficedula_albicollis
ENSSMAG00000012618rbfox3b7161.475ENSFDAG00000007489RBFOX310063.797Fukomys_damarensis
ENSSMAG00000012618rbfox3b7093.960ENSFHEG00000008550rbfox3b10093.960Fundulus_heteroclitus
ENSSMAG00000012618rbfox3b5477.273ENSGMOG00000019304-10065.306Gadus_morhua
ENSSMAG00000012618rbfox3b8573.670ENSGALG00000032889RBFOX39974.734Gallus_gallus
ENSSMAG00000012618rbfox3b8788.542ENSGAFG00000005025rbfox3b10088.542Gambusia_affinis
ENSSMAG00000012618rbfox3b7165.934ENSGACG00000002138-10068.957Gasterosteus_aculeatus
ENSSMAG00000012618rbfox3b7879.420ENSGAGG00000020025RBFOX310079.635Gopherus_agassizii
ENSSMAG00000012618rbfox3b7176.266ENSGGOG00000012546RBFOX310078.248Gorilla_gorilla
ENSSMAG00000012618rbfox3b7977.077ENSHBUG00000023098-9977.961Haplochromis_burtoni
ENSSMAG00000012618rbfox3b8794.531ENSHBUG00000018099rbfox3b10094.531Haplochromis_burtoni
ENSSMAG00000012618rbfox3b7166.033ENSHGLG00000008679RBFOX310067.758Heterocephalus_glaber_female
ENSSMAG00000012618rbfox3b7163.043ENSHGLG00100014739RBFOX310064.987Heterocephalus_glaber_male
ENSSMAG00000012618rbfox3b7570.517ENSHCOG00000001863RBFOX39370.958Hippocampus_comes
ENSSMAG00000012618rbfox3b8576.720ENSHCOG00000007444RBFOX39476.486Hippocampus_comes
ENSSMAG00000012618rbfox3b7570.083ENSIPUG00000021966rbfox3b9880.071Ictalurus_punctatus
ENSSMAG00000012618rbfox3b8778.880ENSIPUG00000012010rbfox3a10080.662Ictalurus_punctatus
ENSSMAG00000012618rbfox3b7160.748ENSSTOG00000026817RBFOX310064.000Ictidomys_tridecemlineatus
ENSSMAG00000012618rbfox3b7164.738ENSJJAG00000014167Rbfox310069.133Jaculus_jaculus
ENSSMAG00000012618rbfox3b8795.052ENSKMAG00000006726rbfox3b10095.052Kryptolebias_marmoratus
ENSSMAG00000012618rbfox3b8881.122ENSLBEG00000022508-9776.127Labrus_bergylta
ENSSMAG00000012618rbfox3b8587.500ENSLBEG00000004030rbfox3b10089.458Labrus_bergylta
ENSSMAG00000012618rbfox3b7768.733ENSLACG00000018409-10066.667Latimeria_chalumnae
ENSSMAG00000012618rbfox3b7784.503ENSLOCG00000012267rbfox3a9885.673Lepisosteus_oculatus
ENSSMAG00000012618rbfox3b7870.856ENSLAFG00000016623RBFOX310069.133Loxodonta_africana
ENSSMAG00000012618rbfox3b7165.289ENSMFAG00000002247RBFOX310068.519Macaca_fascicularis
ENSSMAG00000012618rbfox3b7176.266ENSMMUG00000023028RBFOX310078.248Macaca_mulatta
ENSSMAG00000012618rbfox3b7175.949ENSMNEG00000041147RBFOX310077.946Macaca_nemestrina
ENSSMAG00000012618rbfox3b7176.266ENSMLEG00000025686RBFOX310078.248Mandrillus_leucophaeus
ENSSMAG00000012618rbfox3b7583.587ENSMAMG00000019810rbfox3b10083.133Mastacembelus_armatus
ENSSMAG00000012618rbfox3b7776.608ENSMAMG00000020600-9974.521Mastacembelus_armatus
ENSSMAG00000012618rbfox3b7359.207ENSMZEG00005003055-6675.439Maylandia_zebra
ENSSMAG00000012618rbfox3b8794.531ENSMZEG00005000781rbfox3b10090.625Maylandia_zebra
ENSSMAG00000012618rbfox3b5475.847ENSMGAG00000005600RBFOX38375.000Meleagris_gallopavo
ENSSMAG00000012618rbfox3b7166.484ENSMAUG00000013543Rbfox310068.448Mesocricetus_auratus
ENSSMAG00000012618rbfox3b7777.778ENSMICG00000014898RBFOX310077.273Microcebus_murinus
ENSSMAG00000012618rbfox3b7164.286ENSMOCG00000015373Rbfox310067.939Microtus_ochrogaster
ENSSMAG00000012618rbfox3b8793.005ENSMMOG00000020193rbfox3b10093.005Mola_mola
ENSSMAG00000012618rbfox3b7876.301ENSMODG00000002089RBFOX39277.168Monodelphis_domestica
ENSSMAG00000012618rbfox3b8793.490ENSMALG00000020407rbfox3b10093.490Monopterus_albus
ENSSMAG00000012618rbfox3b8778.663ENSMALG00000018270-10076.555Monopterus_albus
ENSSMAG00000012618rbfox3b7174.763MGP_CAROLIEiJ_G0017487Rbfox39689.209Mus_caroli
ENSSMAG00000012618rbfox3b7176.656ENSMUSG00000025576Rbfox39689.209Mus_musculus
ENSSMAG00000012618rbfox3b7175.472MGP_PahariEiJ_G0018614Rbfox39689.928Mus_pahari
ENSSMAG00000012618rbfox3b7175.079MGP_SPRETEiJ_G0018331Rbfox39689.209Mus_spretus
ENSSMAG00000012618rbfox3b7868.930ENSMPUG00000012319RBFOX39971.033Mustela_putorius_furo
ENSSMAG00000012618rbfox3b7165.385ENSNGAG00000018006Rbfox310069.211Nannospalax_galili
ENSSMAG00000012618rbfox3b8793.490ENSNBRG00000010102rbfox3b10093.490Neolamprologus_brichardi
ENSSMAG00000012618rbfox3b7971.470ENSNBRG00000022885-9171.633Neolamprologus_brichardi
ENSSMAG00000012618rbfox3b7553.636ENSNLEG00000000153-9553.030Nomascus_leucogenys
ENSSMAG00000012618rbfox3b6985.106ENSMEUG00000004218-8474.194Notamacropus_eugenii
ENSSMAG00000012618rbfox3b5880.000ENSOPRG00000016279-7181.667Ochotona_princeps
ENSSMAG00000012618rbfox3b7177.918ENSODEG00000009433RBFOX310077.711Octodon_degus
ENSSMAG00000012618rbfox3b8075.843ENSONIG00000007282-9976.124Oreochromis_niloticus
ENSSMAG00000012618rbfox3b8795.312ENSONIG00000009549rbfox3b10095.312Oreochromis_niloticus
ENSSMAG00000012618rbfox3b5563.732ENSOCUG00000014217RBFOX37863.028Oryctolagus_cuniculus
ENSSMAG00000012618rbfox3b9093.216ENSORLG00000000905rbfox3b7990.513Oryzias_latipes
ENSSMAG00000012618rbfox3b8797.656ENSORLG00020018030rbfox3b10097.656Oryzias_latipes_hni
ENSSMAG00000012618rbfox3b8797.917ENSORLG00015009200rbfox3b10097.917Oryzias_latipes_hsok
ENSSMAG00000012618rbfox3b7596.657ENSOMEG00000014677rbfox3b8696.657Oryzias_melastigma
ENSSMAG00000012618rbfox3b7776.246ENSOGAG00000029595RBFOX39772.368Otolemur_garnettii
ENSSMAG00000012618rbfox3b7658.011ENSOARG00000002908RBFOX39956.158Ovis_aries
ENSSMAG00000012618rbfox3b6177.491ENSPPAG00000025383RBFOX39976.974Pan_paniscus
ENSSMAG00000012618rbfox3b7164.426ENSPPRG00000007819RBFOX310068.548Panthera_pardus
ENSSMAG00000012618rbfox3b7176.266ENSPTRG00000009727RBFOX310078.248Pan_troglodytes
ENSSMAG00000012618rbfox3b7176.266ENSPANG00000019837RBFOX310078.248Papio_anubis
ENSSMAG00000012618rbfox3b9481.862ENSPKIG00000010299rbfox3a9983.471Paramormyrops_kingsleyae
ENSSMAG00000012618rbfox3b7768.513ENSPKIG00000022633-9466.575Paramormyrops_kingsleyae
ENSSMAG00000012618rbfox3b6986.139ENSPMGG00000008000rbfox3b8886.139Periophthalmus_magnuspinnatus
ENSSMAG00000012618rbfox3b7164.835ENSPEMG00000010500Rbfox310068.448Peromyscus_maniculatus_bairdii
ENSSMAG00000012618rbfox3b7867.684ENSPCIG00000005766RBFOX310076.254Phascolarctos_cinereus
ENSSMAG00000012618rbfox3b8795.052ENSPFOG00000018294rbfox3b10091.106Poecilia_formosa
ENSSMAG00000012618rbfox3b5988.372ENSPLAG00000000481rbfox3b8488.971Poecilia_latipinna
ENSSMAG00000012618rbfox3b7093.624ENSPMEG00000022997rbfox3b10093.624Poecilia_mexicana
ENSSMAG00000012618rbfox3b8795.573ENSPREG00000012886rbfox3b9995.573Poecilia_reticulata
ENSSMAG00000012618rbfox3b7567.514ENSPPYG00000008704RBFOX39967.324Pongo_abelii
ENSSMAG00000012618rbfox3b7162.534ENSPCAG00000001401RBFOX310061.640Procavia_capensis
ENSSMAG00000012618rbfox3b7565.873ENSPCOG00000012689RBFOX310067.725Propithecus_coquereli
ENSSMAG00000012618rbfox3b7156.593ENSPVAG00000015243RBFOX310061.214Pteropus_vampyrus
ENSSMAG00000012618rbfox3b8576.064ENSPNYG00000010414rbfox3b9775.989Pundamilia_nyererei
ENSSMAG00000012618rbfox3b8572.679ENSPNYG00000009079-9472.513Pundamilia_nyererei
ENSSMAG00000012618rbfox3b8780.916ENSPNAG00000002889rbfox3a10082.443Pygocentrus_nattereri
ENSSMAG00000012618rbfox3b7073.154ENSPNAG00000018173rbfox3b9074.161Pygocentrus_nattereri
ENSSMAG00000012618rbfox3b7175.472ENSRNOG00000003386Rbfox310077.177Rattus_norvegicus
ENSSMAG00000012618rbfox3b7875.793ENSRBIG00000040449RBFOX39276.945Rhinopithecus_bieti
ENSSMAG00000012618rbfox3b7176.266ENSRROG00000000766RBFOX310078.248Rhinopithecus_roxellana
ENSSMAG00000012618rbfox3b7175.949ENSSBOG00000031591RBFOX310077.946Saimiri_boliviensis_boliviensis
ENSSMAG00000012618rbfox3b7771.850ENSSHAG00000016076RBFOX310076.254Sarcophilus_harrisii
ENSSMAG00000012618rbfox3b8783.077ENSSFOG00015023260rbfox3a10084.103Scleropages_formosus
ENSSMAG00000012618rbfox3b7871.470ENSSFOG00015004716RBFOX39869.206Scleropages_formosus
ENSSMAG00000012618rbfox3b8573.936ENSSDUG00000015801-9873.333Seriola_dumerili
ENSSMAG00000012618rbfox3b7093.960ENSSDUG00000023183rbfox3b10093.960Seriola_dumerili
ENSSMAG00000012618rbfox3b8795.312ENSSLDG00000000149rbfox3b10095.312Seriola_lalandi_dorsalis
ENSSMAG00000012618rbfox3b8577.128ENSSLDG00000016098-9776.842Seriola_lalandi_dorsalis
ENSSMAG00000012618rbfox3b7179.683ENSSPUG00000011733RBFOX39979.394Sphenodon_punctatus
ENSSMAG00000012618rbfox3b8579.255ENSSPAG00000017571rbfox3b9779.156Stegastes_partitus
ENSSMAG00000012618rbfox3b6572.664ENSSPAG00000004898-8572.368Stegastes_partitus
ENSSMAG00000012618rbfox3b6576.389ENSSSCG00000039498RBFOX310068.481Sus_scrofa
ENSSMAG00000012618rbfox3b7786.957ENSTRUG00000004894rbfox3b9788.022Takifugu_rubripes
ENSSMAG00000012618rbfox3b7784.946ENSTNIG00000011278rbfox3b9979.126Tetraodon_nigroviridis
ENSSMAG00000012618rbfox3b7159.780ENSTTRG00000003676RBFOX310063.228Tursiops_truncatus
ENSSMAG00000012618rbfox3b7176.266ENSUAMG00000004668RBFOX310078.852Ursus_americanus
ENSSMAG00000012618rbfox3b7876.453ENSVVUG00000017864RBFOX310078.248Vulpes_vulpes
ENSSMAG00000012618rbfox3b7764.560ENSXETG00000020236rbfox39860.644Xenopus_tropicalis
ENSSMAG00000012618rbfox3b8593.651ENSXCOG00000018262rbfox3b10093.651Xiphophorus_couchianus
ENSSMAG00000012618rbfox3b8795.312ENSXMAG00000012939rbfox3b9699.329Xiphophorus_maculatus

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