EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSSMAG00000012678 (Gene tree)
Gene ID: -
Gene Symbol: rab12
Alias: zgc:111945
Full Name: RAB12%2C member RAS oncogene family
Gene Type: protein_coding
Species: Scophthalmus_maximus
Status: putative
Strand: Plus strand
Length: 9361 bases
Position: chr7:3819413-3828773
Accession: ZDB-GENE-050522-555
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSMAP00000020704	MMR_HSR1	PF01926.23	2.1e-06	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSMAT00000020955	-	4739	-	ENSSMAP00000020704	242 (aa)	-	A0A2U9BI58

Gene Model

Click here to download ENSSMAG00000012678's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSMAG00000012678's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSSMAG00000012678	rab12	74	41.341	ENSSMAG00000005651	-	82	42.286
ENSSMAG00000012678	rab12	70	38.150	ENSSMAG00000014078	RAB9A	85	38.150
ENSSMAG00000012678	rab12	71	37.209	ENSSMAG00000007323	rab5c	76	36.628
ENSSMAG00000012678	rab12	70	41.279	ENSSMAG00000020311	rab42a	78	41.279
ENSSMAG00000012678	rab12	78	44.974	ENSSMAG00000021049	-	83	48.521
ENSSMAG00000012678	rab12	71	46.821	ENSSMAG00000002569	-	83	46.821
ENSSMAG00000012678	rab12	69	31.138	ENSSMAG00000013303	rheb	89	31.138
ENSSMAG00000012678	rab12	77	35.417	ENSSMAG00000002229	zgc:101559	79	35.829
ENSSMAG00000012678	rab12	87	37.383	ENSSMAG00000016183	rab25b	80	40.462
ENSSMAG00000012678	rab12	84	37.963	ENSSMAG00000018613	-	75	42.424
ENSSMAG00000012678	rab12	65	36.025	ENSSMAG00000020045	rab36	61	35.802
ENSSMAG00000012678	rab12	85	36.842	ENSSMAG00000001414	-	71	38.922
ENSSMAG00000012678	rab12	83	34.000	ENSSMAG00000017205	-	79	37.576
ENSSMAG00000012678	rab12	71	45.349	ENSSMAG00000004416	-	80	45.349
ENSSMAG00000012678	rab12	77	33.505	ENSSMAG00000006341	rab23	78	35.185
ENSSMAG00000012678	rab12	68	35.714	ENSSMAG00000017426	rab9a	78	35.714
ENSSMAG00000012678	rab12	55	30.075	ENSSMAG00000008394	arl4d	67	30.075
ENSSMAG00000012678	rab12	71	49.419	ENSSMAG00000016376	-	86	49.419
ENSSMAG00000012678	rab12	65	38.272	ENSSMAG00000013945	si:dkey-13a21.4	80	37.126
ENSSMAG00000012678	rab12	73	37.079	ENSSMAG00000015955	rab33ba	78	36.649
ENSSMAG00000012678	rab12	68	42.424	ENSSMAG00000016206	rab11al	76	42.424
ENSSMAG00000012678	rab12	77	38.947	ENSSMAG00000011579	RAB7A	80	38.922
ENSSMAG00000012678	rab12	84	35.922	ENSSMAG00000009722	rab25a	95	35.922
ENSSMAG00000012678	rab12	78	31.250	ENSSMAG00000019926	rab34b	68	33.333
ENSSMAG00000012678	rab12	65	31.447	ENSSMAG00000001964	rhebl1	85	31.447
ENSSMAG00000012678	rab12	80	44.560	ENSSMAG00000017528	rab1ab	84	48.235
ENSSMAG00000012678	rab12	68	42.515	ENSSMAG00000001953	rab39bb	78	42.515
ENSSMAG00000012678	rab12	83	31.373	ENSSMAG00000006709	rab9b	81	35.119
ENSSMAG00000012678	rab12	77	30.645	ENSSMAG00000004606	rabl2	71	31.902
ENSSMAG00000012678	rab12	93	33.766	ENSSMAG00000013733	rab33a	60	40.244
ENSSMAG00000012678	rab12	70	47.337	ENSSMAG00000009201	rab1ba	84	47.337
ENSSMAG00000012678	rab12	67	44.444	ENSSMAG00000000660	rab35b	94	40.838
ENSSMAG00000012678	rab12	79	36.126	ENSSMAG00000015774	rab41	78	37.576
ENSSMAG00000012678	rab12	75	38.674	ENSSMAG00000011769	si:dkey-16l2.16	80	38.674
ENSSMAG00000012678	rab12	81	36.548	ENSSMAG00000018454	-	78	40.237
ENSSMAG00000012678	rab12	67	48.171	ENSSMAG00000002969	rab18a	79	48.171
ENSSMAG00000012678	rab12	79	40.625	ENSSMAG00000001002	rab2a	92	40.816
ENSSMAG00000012678	rab12	84	37.963	ENSSMAG00000004922	rab11bb	75	43.030
ENSSMAG00000012678	rab12	84	38.756	ENSSMAG00000004133	rab11a	76	41.818
ENSSMAG00000012678	rab12	71	43.860	ENSSMAG00000019773	rab15	80	43.860
ENSSMAG00000012678	rab12	66	33.962	ENSSMAG00000010140	rab22a	84	33.962
ENSSMAG00000012678	rab12	67	48.171	ENSSMAG00000011814	rab18b	79	48.171
ENSSMAG00000012678	rab12	69	36.207	ENSSMAG00000012178	-	66	36.646
ENSSMAG00000012678	rab12	64	30.573	ENSSMAG00000004806	si:ch73-116o1.2	80	30.952
ENSSMAG00000012678	rab12	66	34.146	ENSSMAG00000004343	rab34a	61	34.146
ENSSMAG00000012678	rab12	62	31.126	ENSSMAG00000007370	kras	86	30.864
ENSSMAG00000012678	rab12	79	37.173	ENSSMAG00000000335	rab6bb	84	37.714
ENSSMAG00000012678	rab12	83	34.826	ENSSMAG00000009229	rab5aa	82	36.872
ENSSMAG00000012678	rab12	71	45.930	ENSSMAG00000002500	rab30	85	45.930
ENSSMAG00000012678	rab12	86	35.849	ENSSMAG00000003166	rab14	78	40.828

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSMAG00000012678	rab12	100	79.508	ENSG00000206418	RAB12	100	82.787	Homo_sapiens
ENSSMAG00000012678	rab12	90	76.712	ENSAMEG00000007452	RAB12	94	80.365	Ailuropoda_melanoleuca
ENSSMAG00000012678	rab12	100	96.311	ENSACIG00000020616	rab12	100	96.311	Amphilophus_citrinellus
ENSSMAG00000012678	rab12	100	95.885	ENSAOCG00000002130	rab12	100	95.885	Amphiprion_ocellaris
ENSSMAG00000012678	rab12	100	95.885	ENSAPEG00000013255	rab12	100	95.885	Amphiprion_percula
ENSSMAG00000012678	rab12	100	97.107	ENSATEG00000019683	rab12	100	97.107	Anabas_testudineus
ENSSMAG00000012678	rab12	83	88.500	ENSACAG00000003360	RAB12	85	87.671	Anolis_carolinensis
ENSSMAG00000012678	rab12	100	96.708	ENSACLG00000007696	rab12	100	96.708	Astatotilapia_calliptera
ENSSMAG00000012678	rab12	100	87.805	ENSAMXG00000004882	rab12	100	88.618	Astyanax_mexicanus
ENSSMAG00000012678	rab12	93	83.556	ENSBTAG00000010356	RAB12	100	83.197	Bos_taurus
ENSSMAG00000012678	rab12	93	84.071	ENSCJAG00000015468	RAB12	72	83.673	Callithrix_jacchus
ENSSMAG00000012678	rab12	93	83.111	ENSCAFG00020023721	RAB12	84	82.787	Canis_lupus_dingo
ENSSMAG00000012678	rab12	93	83.556	ENSCHIG00000016103	RAB12	100	83.197	Capra_hircus
ENSSMAG00000012678	rab12	86	84.286	ENSCPOG00000022689	RAB12	100	88.571	Cavia_porcellus
ENSSMAG00000012678	rab12	100	80.408	ENSCCAG00000022862	RAB12	100	83.673	Cebus_capucinus
ENSSMAG00000012678	rab12	91	83.036	ENSCATG00000037784	RAB12	91	86.758	Cercocebus_atys
ENSSMAG00000012678	rab12	84	87.317	ENSCSAG00000017569	RAB12	63	86.758	Chlorocebus_sabaeus
ENSSMAG00000012678	rab12	93	81.858	ENSCPBG00000028375	RAB12	89	86.758	Chrysemys_picta_bellii
ENSSMAG00000012678	rab12	90	83.105	ENSCANG00000031453	RAB12	99	86.758	Colobus_angolensis_palliatus
ENSSMAG00000012678	rab12	93	83.628	ENSCGRG00001006958	Rab12	75	86.758	Cricetulus_griseus_chok1gshd
ENSSMAG00000012678	rab12	100	96.708	ENSCSEG00000016933	rab12	100	96.708	Cynoglossus_semilaevis
ENSSMAG00000012678	rab12	100	91.870	ENSCVAG00000003539	rab12	100	93.089	Cyprinodon_variegatus
ENSSMAG00000012678	rab12	100	86.777	ENSDARG00000089428	rab12	93	92.202	Danio_rerio
ENSSMAG00000012678	rab12	84	87.317	ENSDNOG00000046064	RAB12	50	86.758	Dasypus_novemcinctus
ENSSMAG00000012678	rab12	93	82.379	ENSDORG00000008920	Rab12	96	87.215	Dipodomys_ordii
ENSSMAG00000012678	rab12	78	64.550	ENSEBUG00000006581	rab12	89	65.934	Eptatretus_burgeri
ENSSMAG00000012678	rab12	93	83.186	ENSEASG00005002926	RAB12	75	86.758	Equus_asinus_asinus
ENSSMAG00000012678	rab12	93	83.186	ENSECAG00000007384	RAB12	64	86.758	Equus_caballus
ENSSMAG00000012678	rab12	100	90.909	ENSELUG00000007123	rab12	100	89.256	Esox_lucius
ENSSMAG00000012678	rab12	93	83.111	ENSFCAG00000027710	RAB12	72	82.787	Felis_catus
ENSSMAG00000012678	rab12	100	93.469	ENSFHEG00000004319	rab12	100	94.286	Fundulus_heteroclitus
ENSSMAG00000012678	rab12	86	89.904	ENSGMOG00000012335	rab12	87	87.981	Gadus_morhua
ENSSMAG00000012678	rab12	93	82.895	ENSGALG00000033608	RAB12	88	87.215	Gallus_gallus
ENSSMAG00000012678	rab12	90	91.244	ENSGACG00000016639	rab12	100	91.244	Gasterosteus_aculeatus
ENSSMAG00000012678	rab12	93	81.416	ENSGAGG00000007278	RAB12	89	86.758	Gopherus_agassizii
ENSSMAG00000012678	rab12	100	96.708	ENSHBUG00000008497	rab12	100	96.708	Haplochromis_burtoni
ENSSMAG00000012678	rab12	95	80.172	ENSHGLG00000006189	RAB12	86	87.671	Heterocephalus_glaber_female
ENSSMAG00000012678	rab12	100	91.358	ENSHCOG00000012376	rab12	100	90.947	Hippocampus_comes
ENSSMAG00000012678	rab12	93	90.179	ENSIPUG00000017401	rab12	89	91.284	Ictalurus_punctatus
ENSSMAG00000012678	rab12	90	83.562	ENSSTOG00000025122	RAB12	96	87.215	Ictidomys_tridecemlineatus
ENSSMAG00000012678	rab12	93	81.938	ENSJJAG00000019064	Rab12	96	86.758	Jaculus_jaculus
ENSSMAG00000012678	rab12	100	91.322	ENSKMAG00000020056	rab12	100	89.669	Kryptolebias_marmoratus
ENSSMAG00000012678	rab12	100	96.694	ENSLBEG00000013756	rab12	100	96.694	Labrus_bergylta
ENSSMAG00000012678	rab12	91	85.650	ENSLACG00000010461	RAB12	88	85.845	Latimeria_chalumnae
ENSSMAG00000012678	rab12	100	83.065	ENSLOCG00000002680	rab12	100	84.677	Lepisosteus_oculatus
ENSSMAG00000012678	rab12	100	79.675	ENSMFAG00000043551	RAB12	89	86.758	Macaca_fascicularis
ENSSMAG00000012678	rab12	84	87.317	ENSMNEG00000040853	RAB12	87	86.758	Macaca_nemestrina
ENSSMAG00000012678	rab12	100	98.347	ENSMAMG00000006862	rab12	100	98.347	Mastacembelus_armatus
ENSSMAG00000012678	rab12	100	96.708	ENSMZEG00005024316	rab12	100	96.708	Maylandia_zebra
ENSSMAG00000012678	rab12	83	83.824	ENSMGAG00000009197	RAB12	100	87.745	Meleagris_gallopavo
ENSSMAG00000012678	rab12	93	83.628	ENSMAUG00000008371	Rab12	83	82.377	Mesocricetus_auratus
ENSSMAG00000012678	rab12	91	83.036	ENSMICG00000030661	RAB12	92	86.758	Microcebus_murinus
ENSSMAG00000012678	rab12	93	80.263	ENSMOCG00000000452	Rab12	100	86.758	Microtus_ochrogaster
ENSSMAG00000012678	rab12	86	87.081	ENSMODG00000021452	RAB12	65	87.215	Monodelphis_domestica
ENSSMAG00000012678	rab12	100	95.455	ENSMALG00000015762	rab12	100	95.455	Monopterus_albus
ENSSMAG00000012678	rab12	93	84.071	MGP_CAROLIEiJ_G0021839	Rab12	75	87.671	Mus_caroli
ENSSMAG00000012678	rab12	93	84.071	ENSMUSG00000023460	Rab12	90	87.671	Mus_musculus
ENSSMAG00000012678	rab12	93	84.071	MGP_PahariEiJ_G0020826	Rab12	90	87.671	Mus_pahari
ENSSMAG00000012678	rab12	93	84.071	MGP_SPRETEiJ_G0022750	Rab12	75	87.671	Mus_spretus
ENSSMAG00000012678	rab12	100	79.592	ENSMLUG00000002883	RAB12	90	86.758	Myotis_lucifugus
ENSSMAG00000012678	rab12	95	80.258	ENSNGAG00000024103	-	94	86.301	Nannospalax_galili
ENSSMAG00000012678	rab12	91	76.339	ENSNGAG00000019722	-	89	76.256	Nannospalax_galili
ENSSMAG00000012678	rab12	100	96.708	ENSNBRG00000014428	rab12	100	96.708	Neolamprologus_brichardi
ENSSMAG00000012678	rab12	100	79.098	ENSNLEG00000006939	RAB12	100	82.377	Nomascus_leucogenys
ENSSMAG00000012678	rab12	100	79.675	ENSMEUG00000000493	RAB12	89	87.215	Notamacropus_eugenii
ENSSMAG00000012678	rab12	90	84.475	ENSODEG00000006414	RAB12	100	88.128	Octodon_degus
ENSSMAG00000012678	rab12	100	96.296	ENSONIG00000018469	rab12	100	96.296	Oreochromis_niloticus
ENSSMAG00000012678	rab12	100	95.455	ENSORLG00000003902	rab12	100	95.455	Oryzias_latipes
ENSSMAG00000012678	rab12	100	95.041	ENSORLG00020005131	rab12	100	95.041	Oryzias_latipes_hni
ENSSMAG00000012678	rab12	100	95.041	ENSORLG00015007869	rab12	100	95.041	Oryzias_latipes_hsok
ENSSMAG00000012678	rab12	100	96.281	ENSOMEG00000008191	rab12	100	96.281	Oryzias_melastigma
ENSSMAG00000012678	rab12	86	83.810	ENSOGAG00000028002	RAB12	99	87.619	Otolemur_garnettii
ENSSMAG00000012678	rab12	79	87.958	ENSOARG00000000728	RAB12	88	86.047	Ovis_aries
ENSSMAG00000012678	rab12	85	83.092	ENSPPAG00000009152	RAB12	97	87.379	Pan_paniscus
ENSSMAG00000012678	rab12	93	83.111	ENSPPRG00000024521	RAB12	100	82.787	Panthera_pardus
ENSSMAG00000012678	rab12	100	79.508	ENSPTRG00000009853	RAB12	100	82.787	Pan_troglodytes
ENSSMAG00000012678	rab12	100	79.757	ENSPANG00000009320	RAB12	89	87.215	Papio_anubis
ENSSMAG00000012678	rab12	100	88.477	ENSPKIG00000008579	rab12	100	87.190	Paramormyrops_kingsleyae
ENSSMAG00000012678	rab12	100	91.322	ENSPMGG00000001890	rab12	100	91.322	Periophthalmus_magnuspinnatus
ENSSMAG00000012678	rab12	93	84.071	ENSPEMG00000021032	Rab12	75	87.215	Peromyscus_maniculatus_bairdii
ENSSMAG00000012678	rab12	93	83.260	ENSPCIG00000010453	RAB12	55	87.215	Phascolarctos_cinereus
ENSSMAG00000012678	rab12	100	92.623	ENSPFOG00000001579	rab12	100	92.623	Poecilia_formosa
ENSSMAG00000012678	rab12	100	92.623	ENSPLAG00000013594	rab12	100	92.623	Poecilia_latipinna
ENSSMAG00000012678	rab12	100	92.623	ENSPMEG00000010417	rab12	100	92.623	Poecilia_mexicana
ENSSMAG00000012678	rab12	100	92.623	ENSPREG00000017487	rab12	100	93.033	Poecilia_reticulata
ENSSMAG00000012678	rab12	93	83.111	ENSPPYG00000009015	-	72	82.787	Pongo_abelii
ENSSMAG00000012678	rab12	100	79.098	ENSPCAG00000015007	RAB12	100	82.377	Procavia_capensis
ENSSMAG00000012678	rab12	100	79.508	ENSPCOG00000019816	RAB12	100	82.787	Propithecus_coquereli
ENSSMAG00000012678	rab12	100	79.098	ENSPVAG00000002757	RAB12	100	82.377	Pteropus_vampyrus
ENSSMAG00000012678	rab12	100	96.708	ENSPNYG00000005654	rab12	100	96.708	Pundamilia_nyererei
ENSSMAG00000012678	rab12	100	96.708	ENSPNYG00000023905	rab12	100	96.708	Pundamilia_nyererei
ENSSMAG00000012678	rab12	100	87.398	ENSPNAG00000015031	rab12	100	88.211	Pygocentrus_nattereri
ENSSMAG00000012678	rab12	93	82.379	ENSRNOG00000019295	Rab12	82	86.070	Rattus_norvegicus
ENSSMAG00000012678	rab12	91	83.036	ENSRBIG00000028760	RAB12	94	86.758	Rhinopithecus_bieti
ENSSMAG00000012678	rab12	93	81.938	ENSRROG00000019249	RAB12	92	86.758	Rhinopithecus_roxellana
ENSSMAG00000012678	rab12	95	78.355	ENSSBOG00000021125	RAB12	80	87.081	Saimiri_boliviensis_boliviensis
ENSSMAG00000012678	rab12	93	82.743	ENSSHAG00000001489	RAB12	88	87.437	Sarcophilus_harrisii
ENSSMAG00000012678	rab12	100	97.934	ENSSDUG00000008505	rab12	100	97.934	Seriola_dumerili
ENSSMAG00000012678	rab12	100	97.934	ENSSLDG00000022239	rab12	100	97.934	Seriola_lalandi_dorsalis
ENSSMAG00000012678	rab12	97	83.544	ENSSPUG00000003222	RAB12	89	88.128	Sphenodon_punctatus
ENSSMAG00000012678	rab12	100	96.296	ENSSPAG00000010822	rab12	100	96.296	Stegastes_partitus
ENSSMAG00000012678	rab12	93	83.111	ENSSSCG00000038026	RAB12	100	83.197	Sus_scrofa
ENSSMAG00000012678	rab12	86	87.560	ENSTGUG00000009889	RAB12	88	87.671	Taeniopygia_guttata
ENSSMAG00000012678	rab12	100	92.975	ENSTRUG00000024455	rab12	100	92.975	Takifugu_rubripes
ENSSMAG00000012678	rab12	100	93.388	ENSTNIG00000014859	rab12	100	93.388	Tetraodon_nigroviridis
ENSSMAG00000012678	rab12	90	83.105	ENSTTRG00000008711	RAB12	99	86.758	Tursiops_truncatus
ENSSMAG00000012678	rab12	100	79.508	ENSUAMG00000018092	RAB12	100	82.787	Ursus_americanus
ENSSMAG00000012678	rab12	90	82.353	ENSVVUG00000011748	RAB12	99	86.301	Vulpes_vulpes
ENSSMAG00000012678	rab12	89	87.615	ENSXETG00000004289	rab12	71	87.273	Xenopus_tropicalis
ENSSMAG00000012678	rab12	100	92.213	ENSXCOG00000019310	rab12	100	92.623	Xiphophorus_couchianus
ENSSMAG00000012678	rab12	100	92.623	ENSXMAG00000023617	rab12	100	93.033	Xiphophorus_maculatus