EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSSMAG00000012725 (Gene tree)
Gene ID: -
Gene Symbol: lsm14b
Alias: zRAP55|zgc:55673
Full Name: LSM family member 14B
Gene Type: protein_coding
Species: Scophthalmus_maximus
Status: putative
Strand: Minus strand
Length: 2054 bases
Position: chr6:20005440-20007493
Accession: ZDB-GENE-040426-779
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSMAP00000020759	FDF	PF09532.10	1.2e-10	1	1
ENSSMAP00000020759	SM-ATX	PF14438.6	8.2e-09	1	1
ENSSMAP00000020759	LSM14	PF12701.7	6.9e-32	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSMAT00000021010	-	1131	-	ENSSMAP00000020759	376 (aa)	-	A0A2U9BGY8

Gene Model

Click here to download ENSSMAG00000012725's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSMAG00000012725's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSSMAG00000012725	lsm14b	99	47.500	ENSSMAG00000000135	LSM14B	90	50.416
ENSSMAG00000012725	lsm14b	66	49.425	ENSSMAG00000019398	lsm14aa	85	39.524
ENSSMAG00000012725	lsm14b	91	40.741	ENSSMAG00000009782	lsm14ab	85	42.289

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSMAG00000012725	lsm14b	92	54.054	ENSG00000149657	LSM14B	100	51.447	Homo_sapiens
ENSSMAG00000012725	lsm14b	100	83.777	ENSAPOG00000001780	lsm14b	100	83.777	Acanthochromis_polyacanthus
ENSSMAG00000012725	lsm14b	91	48.762	ENSAMEG00000013430	LSM14B	91	48.622	Ailuropoda_melanoleuca
ENSSMAG00000012725	lsm14b	99	75.202	ENSACIG00000012266	lsm14b	99	75.202	Amphilophus_citrinellus
ENSSMAG00000012725	lsm14b	62	41.633	ENSACIG00000003147	LSM14B	87	40.586	Amphilophus_citrinellus
ENSSMAG00000012725	lsm14b	100	84.840	ENSAOCG00000012380	lsm14b	100	84.840	Amphiprion_ocellaris
ENSSMAG00000012725	lsm14b	98	47.906	ENSAOCG00000006667	LSM14B	89	48.127	Amphiprion_ocellaris
ENSSMAG00000012725	lsm14b	100	71.618	ENSAPEG00000023633	lsm14b	100	72.414	Amphiprion_percula
ENSSMAG00000012725	lsm14b	100	76.781	ENSATEG00000016603	lsm14b	100	80.475	Anabas_testudineus
ENSSMAG00000012725	lsm14b	66	42.662	ENSATEG00000015895	LSM14B	87	42.509	Anabas_testudineus
ENSSMAG00000012725	lsm14b	82	45.799	ENSAPLG00000013203	LSM14B	89	45.604	Anas_platyrhynchos
ENSSMAG00000012725	lsm14b	99	51.122	ENSACAG00000016195	LSM14B	90	52.486	Anolis_carolinensis
ENSSMAG00000012725	lsm14b	92	54.424	ENSANAG00000037915	LSM14B	90	54.372	Aotus_nancymaae
ENSSMAG00000012725	lsm14b	52	40.887	ENSACLG00000011955	-	66	37.113	Astatotilapia_calliptera
ENSSMAG00000012725	lsm14b	100	78.515	ENSACLG00000019663	lsm14b	100	78.457	Astatotilapia_calliptera
ENSSMAG00000012725	lsm14b	52	42.365	ENSACLG00000019624	-	67	38.660	Astatotilapia_calliptera
ENSSMAG00000012725	lsm14b	91	59.946	ENSAMXG00000002865	lsm14b	100	58.213	Astyanax_mexicanus
ENSSMAG00000012725	lsm14b	92	49.265	ENSBTAG00000021558	LSM14B	91	49.127	Bos_taurus
ENSSMAG00000012725	lsm14b	92	54.324	ENSCJAG00000014434	LSM14B	90	54.270	Callithrix_jacchus
ENSSMAG00000012725	lsm14b	82	46.448	ENSCAFG00000012518	LSM14B	89	46.260	Canis_familiaris
ENSSMAG00000012725	lsm14b	92	55.586	ENSCAFG00020022150	LSM14B	90	55.525	Canis_lupus_dingo
ENSSMAG00000012725	lsm14b	99	40.979	ENSCHIG00000022681	-	90	41.311	Capra_hircus
ENSSMAG00000012725	lsm14b	92	54.201	ENSCHIG00000010284	-	90	54.144	Capra_hircus
ENSSMAG00000012725	lsm14b	81	51.227	ENSTSYG00000031914	LSM14B	79	51.097	Carlito_syrichta
ENSSMAG00000012725	lsm14b	81	49.240	ENSCAPG00000013059	LSM14B	89	48.765	Cavia_aperea
ENSSMAG00000012725	lsm14b	81	49.538	ENSCPOG00000038080	LSM14B	89	48.916	Cavia_porcellus
ENSSMAG00000012725	lsm14b	92	37.366	ENSCCAG00000024900	-	76	37.302	Cebus_capucinus
ENSSMAG00000012725	lsm14b	92	54.011	ENSCCAG00000021267	LSM14B	90	52.459	Cebus_capucinus
ENSSMAG00000012725	lsm14b	92	54.054	ENSCATG00000036006	LSM14B	90	53.994	Cercocebus_atys
ENSSMAG00000012725	lsm14b	81	51.235	ENSCLAG00000003186	LSM14B	89	50.784	Chinchilla_lanigera
ENSSMAG00000012725	lsm14b	92	48.655	ENSCSAG00000015729	LSM14B	91	48.507	Chlorocebus_sabaeus
ENSSMAG00000012725	lsm14b	68	34.191	ENSCHOG00000006997	-	86	35.124	Choloepus_hoffmanni
ENSSMAG00000012725	lsm14b	91	49.630	ENSCPBG00000027065	LSM14B	91	49.497	Chrysemys_picta_bellii
ENSSMAG00000012725	lsm14b	81	51.534	ENSCANG00000036986	LSM14B	89	51.411	Colobus_angolensis_palliatus
ENSSMAG00000012725	lsm14b	92	55.464	ENSCGRG00001018399	Lsm14b	90	53.867	Cricetulus_griseus_chok1gshd
ENSSMAG00000012725	lsm14b	61	39.931	ENSCGRG00000006111	-	90	38.434	Cricetulus_griseus_crigri
ENSSMAG00000012725	lsm14b	54	41.014	ENSCGRG00000002484	-	82	38.208	Cricetulus_griseus_crigri
ENSSMAG00000012725	lsm14b	100	79.790	ENSCSEG00000004722	lsm14b	100	79.790	Cynoglossus_semilaevis
ENSSMAG00000012725	lsm14b	95	47.568	ENSCSEG00000020669	LSM14B	91	46.281	Cynoglossus_semilaevis
ENSSMAG00000012725	lsm14b	64	38.710	ENSCVAG00000012433	-	89	38.075	Cyprinodon_variegatus
ENSSMAG00000012725	lsm14b	99	57.653	ENSDARG00000025386	lsm14b	91	58.774	Danio_rerio
ENSSMAG00000012725	lsm14b	61	40.339	ENSDNOG00000025246	LSM14B	88	40.345	Dasypus_novemcinctus
ENSSMAG00000012725	lsm14b	82	49.383	ENSDORG00000016683	Lsm14b	78	48.903	Dipodomys_ordii
ENSSMAG00000012725	lsm14b	57	39.485	ENSETEG00000011188	-	99	39.431	Echinops_telfairi
ENSSMAG00000012725	lsm14b	93	44.444	ENSETEG00000001869	-	89	43.626	Echinops_telfairi
ENSSMAG00000012725	lsm14b	61	46.281	ENSEASG00005023218	LSM14B	85	43.750	Equus_asinus_asinus
ENSSMAG00000012725	lsm14b	92	55.556	ENSECAG00000010659	LSM14B	90	55.525	Equus_caballus
ENSSMAG00000012725	lsm14b	55	67.000	ENSEEUG00000007331	LSM14B	79	67.000	Erinaceus_europaeus
ENSSMAG00000012725	lsm14b	99	62.564	ENSELUG00000005780	lsm14b	100	61.538	Esox_lucius
ENSSMAG00000012725	lsm14b	99	48.187	ENSELUG00000016299	LSM14B	99	50.000	Esox_lucius
ENSSMAG00000012725	lsm14b	92	56.216	ENSFCAG00000003248	LSM14B	90	56.164	Felis_catus
ENSSMAG00000012725	lsm14b	82	46.341	ENSFALG00000010618	LSM14B	90	46.154	Ficedula_albicollis
ENSSMAG00000012725	lsm14b	81	50.926	ENSFDAG00000002214	LSM14B	89	48.916	Fukomys_damarensis
ENSSMAG00000012725	lsm14b	80	46.273	ENSFHEG00000003362	LSM14B	79	47.950	Fundulus_heteroclitus
ENSSMAG00000012725	lsm14b	100	72.606	ENSFHEG00000006237	lsm14b	100	72.606	Fundulus_heteroclitus
ENSSMAG00000012725	lsm14b	100	66.491	ENSGMOG00000017115	lsm14b	99	63.325	Gadus_morhua
ENSSMAG00000012725	lsm14b	91	54.201	ENSGALG00000005125	LSM14B	90	53.846	Gallus_gallus
ENSSMAG00000012725	lsm14b	66	40.157	ENSGAFG00000013723	LSM14B	85	40.175	Gambusia_affinis
ENSSMAG00000012725	lsm14b	100	68.519	ENSGAFG00000020318	lsm14b	100	68.519	Gambusia_affinis
ENSSMAG00000012725	lsm14b	99	78.571	ENSGACG00000009973	lsm14b	99	78.571	Gasterosteus_aculeatus
ENSSMAG00000012725	lsm14b	55	42.982	ENSGAGG00000004106	LSM14B	78	43.578	Gopherus_agassizii
ENSSMAG00000012725	lsm14b	82	49.550	ENSGGOG00000005630	LSM14B	85	49.846	Gorilla_gorilla
ENSSMAG00000012725	lsm14b	92	53.678	ENSHGLG00000015055	LSM14B	90	53.315	Heterocephalus_glaber_female
ENSSMAG00000012725	lsm14b	81	48.916	ENSHGLG00100015273	LSM14B	89	48.428	Heterocephalus_glaber_male
ENSSMAG00000012725	lsm14b	69	55.172	ENSHCOG00000004867	lsm14b	100	54.198	Hippocampus_comes
ENSSMAG00000012725	lsm14b	96	46.966	ENSHCOG00000018747	LSM14B	91	47.429	Hippocampus_comes
ENSSMAG00000012725	lsm14b	91	59.557	ENSIPUG00000014946	lsm14b	86	59.834	Ictalurus_punctatus
ENSSMAG00000012725	lsm14b	81	50.000	ENSSTOG00000020482	LSM14B	89	49.379	Ictidomys_tridecemlineatus
ENSSMAG00000012725	lsm14b	91	53.719	ENSJJAG00000012728	Lsm14b	89	53.352	Jaculus_jaculus
ENSSMAG00000012725	lsm14b	52	38.916	ENSKMAG00000012834	-	86	38.579	Kryptolebias_marmoratus
ENSSMAG00000012725	lsm14b	100	73.670	ENSKMAG00000017524	lsm14b	100	73.404	Kryptolebias_marmoratus
ENSSMAG00000012725	lsm14b	65	39.453	ENSLBEG00000007951	LSM14B	85	37.607	Labrus_bergylta
ENSSMAG00000012725	lsm14b	89	74.638	ENSLACG00000003849	LSM14B	91	49.874	Latimeria_chalumnae
ENSSMAG00000012725	lsm14b	91	61.003	ENSLOCG00000003746	lsm14b	100	60.000	Lepisosteus_oculatus
ENSSMAG00000012725	lsm14b	82	50.299	ENSLAFG00000007492	LSM14B	89	50.152	Loxodonta_africana
ENSSMAG00000012725	lsm14b	92	54.054	ENSMFAG00000041479	LSM14B	90	54.420	Macaca_fascicularis
ENSSMAG00000012725	lsm14b	92	54.054	ENSMMUG00000014084	LSM14B	90	54.420	Macaca_mulatta
ENSSMAG00000012725	lsm14b	92	54.054	ENSMNEG00000045573	LSM14B	90	54.420	Macaca_nemestrina
ENSSMAG00000012725	lsm14b	81	50.153	ENSMLEG00000040895	LSM14B	89	50.470	Mandrillus_leucophaeus
ENSSMAG00000012725	lsm14b	97	50.943	ENSMAMG00000024124	LSM14B	90	51.014	Mastacembelus_armatus
ENSSMAG00000012725	lsm14b	100	77.836	ENSMAMG00000020539	lsm14b	100	77.836	Mastacembelus_armatus
ENSSMAG00000012725	lsm14b	100	78.780	ENSMZEG00005000987	lsm14b	100	78.723	Maylandia_zebra
ENSSMAG00000012725	lsm14b	91	49.162	ENSMZEG00005026001	LSM14B	93	49.288	Maylandia_zebra
ENSSMAG00000012725	lsm14b	82	49.701	ENSMGAG00000005300	LSM14B	89	49.240	Meleagris_gallopavo
ENSSMAG00000012725	lsm14b	92	55.191	ENSMAUG00000020700	Lsm14b	90	54.294	Mesocricetus_auratus
ENSSMAG00000012725	lsm14b	92	55.526	ENSMICG00000014675	LSM14B	96	55.963	Microcebus_murinus
ENSSMAG00000012725	lsm14b	92	54.768	ENSMOCG00000020600	Lsm14b	90	54.270	Microtus_ochrogaster
ENSSMAG00000012725	lsm14b	62	40.364	ENSMOCG00000005119	-	91	37.956	Microtus_ochrogaster
ENSSMAG00000012725	lsm14b	90	69.672	ENSMMOG00000020042	lsm14b	93	69.672	Mola_mola
ENSSMAG00000012725	lsm14b	90	49.275	ENSMMOG00000017321	LSM14B	89	50.000	Mola_mola
ENSSMAG00000012725	lsm14b	61	40.210	ENSMODG00000016690	LSM14B	88	40.214	Monodelphis_domestica
ENSSMAG00000012725	lsm14b	100	76.862	ENSMALG00000004783	lsm14b	97	77.309	Monopterus_albus
ENSSMAG00000012725	lsm14b	92	50.275	ENSMALG00000022251	LSM14B	90	49.719	Monopterus_albus
ENSSMAG00000012725	lsm14b	92	55.738	MGP_CAROLIEiJ_G0024770	Lsm14b	90	55.402	Mus_caroli
ENSSMAG00000012725	lsm14b	92	55.738	ENSMUSG00000039108	Lsm14b	90	55.402	Mus_musculus
ENSSMAG00000012725	lsm14b	92	55.014	MGP_PahariEiJ_G0026214	Lsm14b	90	54.670	Mus_pahari
ENSSMAG00000012725	lsm14b	92	55.738	MGP_SPRETEiJ_G0025693	Lsm14b	90	55.402	Mus_spretus
ENSSMAG00000012725	lsm14b	86	44.909	ENSMPUG00000007584	LSM14B	91	44.681	Mustela_putorius_furo
ENSSMAG00000012725	lsm14b	91	54.545	ENSMLUG00000000304	LSM14B	90	54.848	Myotis_lucifugus
ENSSMAG00000012725	lsm14b	59	40.964	ENSNGAG00000016550	Lsm14b	84	41.827	Nannospalax_galili
ENSSMAG00000012725	lsm14b	81	50.153	ENSNLEG00000015757	LSM14B	89	50.000	Nomascus_leucogenys
ENSSMAG00000012725	lsm14b	66	73.427	ENSMEUG00000008267	-	70	73.427	Notamacropus_eugenii
ENSSMAG00000012725	lsm14b	92	54.396	ENSODEG00000004099	LSM14B	90	54.420	Octodon_degus
ENSSMAG00000012725	lsm14b	100	79.841	ENSONIG00000020318	lsm14b	100	79.841	Oreochromis_niloticus
ENSSMAG00000012725	lsm14b	73	53.763	ENSOANG00000003370	LSM14B	100	50.000	Ornithorhynchus_anatinus
ENSSMAG00000012725	lsm14b	81	52.454	ENSOCUG00000006279	LSM14B	89	52.648	Oryctolagus_cuniculus
ENSSMAG00000012725	lsm14b	93	44.972	ENSORLG00000028353	LSM14B	91	45.402	Oryzias_latipes
ENSSMAG00000012725	lsm14b	100	78.723	ENSORLG00000013525	lsm14b	100	79.255	Oryzias_latipes
ENSSMAG00000012725	lsm14b	62	35.907	ENSORLG00020018191	-	85	35.600	Oryzias_latipes_hni
ENSSMAG00000012725	lsm14b	100	78.723	ENSORLG00020020553	lsm14b	100	79.255	Oryzias_latipes_hni
ENSSMAG00000012725	lsm14b	93	45.251	ENSORLG00015013157	LSM14B	91	45.559	Oryzias_latipes_hsok
ENSSMAG00000012725	lsm14b	100	78.723	ENSORLG00015016862	lsm14b	100	79.255	Oryzias_latipes_hsok
ENSSMAG00000012725	lsm14b	100	78.191	ENSOMEG00000023917	lsm14b	100	78.723	Oryzias_melastigma
ENSSMAG00000012725	lsm14b	63	37.131	ENSOMEG00000000171	-	83	36.245	Oryzias_melastigma
ENSSMAG00000012725	lsm14b	92	48.775	ENSOGAG00000003915	LSM14B	91	48.635	Otolemur_garnettii
ENSSMAG00000012725	lsm14b	83	44.772	ENSOARG00000014706	LSM14B	88	45.125	Ovis_aries
ENSSMAG00000012725	lsm14b	82	49.550	ENSPPAG00000035799	LSM14B	85	49.846	Pan_paniscus
ENSSMAG00000012725	lsm14b	92	56.486	ENSPPRG00000009197	LSM14B	90	56.438	Panthera_pardus
ENSSMAG00000012725	lsm14b	61	45.122	ENSPTIG00000021518	LSM14B	91	41.901	Panthera_tigris_altaica
ENSSMAG00000012725	lsm14b	92	54.054	ENSPTRG00000013696	LSM14B	90	53.994	Pan_troglodytes
ENSSMAG00000012725	lsm14b	92	54.054	ENSPANG00000011747	LSM14B	90	53.994	Papio_anubis
ENSSMAG00000012725	lsm14b	99	59.241	ENSPKIG00000003275	lsm14b	86	82.796	Paramormyrops_kingsleyae
ENSSMAG00000012725	lsm14b	82	51.212	ENSPSIG00000014762	LSM14B	89	51.692	Pelodiscus_sinensis
ENSSMAG00000012725	lsm14b	91	54.795	ENSPEMG00000017688	Lsm14b	90	54.444	Peromyscus_maniculatus_bairdii
ENSSMAG00000012725	lsm14b	92	54.595	ENSPCIG00000013405	LSM14B	90	54.521	Phascolarctos_cinereus
ENSSMAG00000012725	lsm14b	100	74.271	ENSPFOG00000005631	lsm14b	100	74.271	Poecilia_formosa
ENSSMAG00000012725	lsm14b	90	48.588	ENSPLAG00000005793	LSM14B	90	46.742	Poecilia_latipinna
ENSSMAG00000012725	lsm14b	100	73.740	ENSPLAG00000002449	lsm14b	100	73.740	Poecilia_latipinna
ENSSMAG00000012725	lsm14b	100	74.005	ENSPMEG00000000745	lsm14b	100	74.005	Poecilia_mexicana
ENSSMAG00000012725	lsm14b	90	48.725	ENSPMEG00000022953	LSM14B	90	47.309	Poecilia_mexicana
ENSSMAG00000012725	lsm14b	62	39.683	ENSPREG00000007828	LSM14B	85	37.860	Poecilia_reticulata
ENSSMAG00000012725	lsm14b	92	50.552	ENSPPYG00000011194	LSM14B	90	49.865	Pongo_abelii
ENSSMAG00000012725	lsm14b	92	55.556	ENSPCOG00000013625	LSM14B	92	56.422	Propithecus_coquereli
ENSSMAG00000012725	lsm14b	72	43.056	ENSPVAG00000017918	LSM14B	100	43.210	Pteropus_vampyrus
ENSSMAG00000012725	lsm14b	90	61.905	ENSPNAG00000012777	lsm14b	90	62.185	Pygocentrus_nattereri
ENSSMAG00000012725	lsm14b	92	50.123	ENSRNOG00000054557	Lsm14b	91	49.750	Rattus_norvegicus
ENSSMAG00000012725	lsm14b	81	51.077	ENSRBIG00000033461	LSM14B	88	51.250	Rhinopithecus_bieti
ENSSMAG00000012725	lsm14b	83	52.553	ENSRROG00000042949	LSM14B	81	52.454	Rhinopithecus_roxellana
ENSSMAG00000012725	lsm14b	81	51.227	ENSSBOG00000032820	LSM14B	89	51.097	Saimiri_boliviensis_boliviensis
ENSSMAG00000012725	lsm14b	82	51.515	ENSSHAG00000015528	LSM14B	86	51.393	Sarcophilus_harrisii
ENSSMAG00000012725	lsm14b	90	60.684	ENSSFOG00015004627	lsm14b	90	60.335	Scleropages_formosus
ENSSMAG00000012725	lsm14b	100	90.212	ENSSDUG00000020977	lsm14b	100	90.212	Seriola_dumerili
ENSSMAG00000012725	lsm14b	92	52.941	ENSSDUG00000022770	LSM14B	90	52.286	Seriola_dumerili
ENSSMAG00000012725	lsm14b	61	44.841	ENSSLDG00000011354	-	87	43.496	Seriola_lalandi_dorsalis
ENSSMAG00000012725	lsm14b	53	39.823	ENSSARG00000007749	-	99	40.708	Sorex_araneus
ENSSMAG00000012725	lsm14b	89	52.125	ENSSPUG00000014360	LSM14B	96	52.408	Sphenodon_punctatus
ENSSMAG00000012725	lsm14b	65	38.321	ENSSPAG00000018854	-	86	36.255	Stegastes_partitus
ENSSMAG00000012725	lsm14b	100	80.319	ENSSPAG00000020915	lsm14b	100	78.989	Stegastes_partitus
ENSSMAG00000012725	lsm14b	92	55.769	ENSSSCG00000026052	LSM14B	75	55.710	Sus_scrofa
ENSSMAG00000012725	lsm14b	82	51.524	ENSTGUG00000007884	LSM14B	89	51.393	Taeniopygia_guttata
ENSSMAG00000012725	lsm14b	100	74.468	ENSTRUG00000011354	lsm14b	100	74.468	Takifugu_rubripes
ENSSMAG00000012725	lsm14b	92	52.368	ENSTRUG00000001529	LSM14B	90	51.705	Takifugu_rubripes
ENSSMAG00000012725	lsm14b	100	70.127	ENSTNIG00000002445	lsm14b	100	70.127	Tetraodon_nigroviridis
ENSSMAG00000012725	lsm14b	90	48.603	ENSUAMG00000025298	LSM14B	89	48.442	Ursus_americanus
ENSSMAG00000012725	lsm14b	90	48.603	ENSUMAG00000000480	LSM14B	89	48.442	Ursus_maritimus
ENSSMAG00000012725	lsm14b	82	51.682	ENSVVUG00000015920	LSM14B	88	51.553	Vulpes_vulpes
ENSSMAG00000012725	lsm14b	85	51.176	ENSXETG00000001997	lsm14b	99	52.632	Xenopus_tropicalis
ENSSMAG00000012725	lsm14b	100	72.606	ENSXMAG00000010013	lsm14b	100	72.606	Xiphophorus_maculatus