EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSSMAG00000012769 (Gene tree)
Gene ID: -
Gene Symbol: tarbp2
Alias: fj51e12|wu:fj51e12|zgc:63778
Full Name: TAR (HIV) RNA binding protein 2
Gene Type: protein_coding
Species: Scophthalmus_maximus
Status: putative
Strand: Plus strand
Length: 6426 bases
Position: chr6:9118638-9125063
Accession: ZDB-GENE-030131-8085
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSMAP00000020849	dsrm	PF00035.26	1.1e-33	1	2
ENSSMAP00000020849	dsrm	PF00035.26	1.1e-33	2	2
ENSSMAP00000020860	dsrm	PF00035.26	1.2e-31	1	2
ENSSMAP00000020860	dsrm	PF00035.26	1.2e-31	2	2
ENSSMAP00000020860	DND1_DSRM	PF14709.7	1.3e-13	1	1
ENSSMAP00000020849	DND1_DSRM	PF14709.7	6.4e-12	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSMAT00000021100	-	1074	-	ENSSMAP00000020849	357 (aa)	-	-
ENSSMAT00000021111	-	1940	-	ENSSMAP00000020860	351 (aa)	-	-

Gene Model

Click here to download ENSSMAG00000012769's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSMAG00000012769's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSSMAG00000012769	tarbp2	96	43.732	ENSSMAG00000015615	prkra	85	43.478

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSMAG00000012769	tarbp2	100	65.027	ENSG00000139546	TARBP2	100	66.763	Homo_sapiens
ENSSMAG00000012769	tarbp2	100	93.447	ENSAPOG00000019892	tarbp2	100	93.447	Acanthochromis_polyacanthus
ENSSMAG00000012769	tarbp2	100	65.574	ENSAMEG00000012601	TARBP2	100	65.027	Ailuropoda_melanoleuca
ENSSMAG00000012769	tarbp2	100	90.598	ENSACIG00000016780	tarbp2	100	89.744	Amphilophus_citrinellus
ENSSMAG00000012769	tarbp2	100	93.162	ENSAOCG00000005201	tarbp2	100	93.162	Amphiprion_ocellaris
ENSSMAG00000012769	tarbp2	100	93.162	ENSAPEG00000008376	tarbp2	100	93.162	Amphiprion_percula
ENSSMAG00000012769	tarbp2	100	92.593	ENSATEG00000025012	tarbp2	100	92.593	Anabas_testudineus
ENSSMAG00000012769	tarbp2	96	70.058	ENSACAG00000001100	TARBP2	95	69.186	Anolis_carolinensis
ENSSMAG00000012769	tarbp2	100	65.574	ENSANAG00000034453	TARBP2	94	77.027	Aotus_nancymaae
ENSSMAG00000012769	tarbp2	97	89.736	ENSACLG00000018569	tarbp2	97	89.736	Astatotilapia_calliptera
ENSSMAG00000012769	tarbp2	100	82.955	ENSAMXG00000016665	tarbp2	100	82.102	Astyanax_mexicanus
ENSSMAG00000012769	tarbp2	100	65.574	ENSBTAG00000000435	TARBP2	100	65.668	Bos_taurus
ENSSMAG00000012769	tarbp2	100	65.574	ENSCJAG00000018668	TARBP2	100	65.395	Callithrix_jacchus
ENSSMAG00000012769	tarbp2	100	67.422	ENSCAFG00000006874	TARBP2	100	66.856	Canis_familiaris
ENSSMAG00000012769	tarbp2	100	65.027	ENSCAFG00020020735	TARBP2	100	67.052	Canis_lupus_dingo
ENSSMAG00000012769	tarbp2	100	63.757	ENSCHIG00000026017	TARBP2	100	64.171	Capra_hircus
ENSSMAG00000012769	tarbp2	100	65.847	ENSTSYG00000035683	TARBP2	94	77.027	Carlito_syrichta
ENSSMAG00000012769	tarbp2	64	67.841	ENSCAPG00000008981	TARBP2	98	69.683	Cavia_aperea
ENSSMAG00000012769	tarbp2	100	64.754	ENSCPOG00000001009	TARBP2	100	65.395	Cavia_porcellus
ENSSMAG00000012769	tarbp2	96	67.335	ENSCCAG00000033025	TARBP2	91	92.453	Cebus_capucinus
ENSSMAG00000012769	tarbp2	100	65.027	ENSCATG00000026344	TARBP2	94	77.027	Cercocebus_atys
ENSSMAG00000012769	tarbp2	100	65.301	ENSCLAG00000009175	TARBP2	100	65.395	Chinchilla_lanigera
ENSSMAG00000012769	tarbp2	100	65.027	ENSCSAG00000005479	TARBP2	100	64.850	Chlorocebus_sabaeus
ENSSMAG00000012769	tarbp2	100	67.030	ENSCPBG00000000654	TARBP2	100	70.000	Chrysemys_picta_bellii
ENSSMAG00000012769	tarbp2	100	63.172	ENSCANG00000040415	TARBP2	91	90.566	Colobus_angolensis_palliatus
ENSSMAG00000012769	tarbp2	100	65.479	ENSCGRG00001011856	TARBP2	100	65.027	Cricetulus_griseus_chok1gshd
ENSSMAG00000012769	tarbp2	100	65.479	ENSCGRG00000009088	TARBP2	100	66.803	Cricetulus_griseus_crigri
ENSSMAG00000012769	tarbp2	100	89.744	ENSCSEG00000010631	tarbp2	100	89.744	Cynoglossus_semilaevis
ENSSMAG00000012769	tarbp2	100	89.174	ENSCVAG00000009832	tarbp2	100	89.174	Cyprinodon_variegatus
ENSSMAG00000012769	tarbp2	100	81.356	ENSDARG00000070471	tarbp2	100	80.737	Danio_rerio
ENSSMAG00000012769	tarbp2	100	64.850	ENSDNOG00000002144	TARBP2	100	65.395	Dasypus_novemcinctus
ENSSMAG00000012769	tarbp2	65	66.667	ENSDORG00000001390	Tarbp2	94	67.982	Dipodomys_ordii
ENSSMAG00000012769	tarbp2	86	80.612	ENSETEG00000002458	TARBP2	77	78.481	Echinops_telfairi
ENSSMAG00000012769	tarbp2	95	56.886	ENSEBUG00000002377	tarbp2	98	57.784	Eptatretus_burgeri
ENSSMAG00000012769	tarbp2	100	66.033	ENSEASG00005010030	TARBP2	100	65.940	Equus_asinus_asinus
ENSSMAG00000012769	tarbp2	100	67.042	ENSECAG00000011695	TARBP2	94	77.027	Equus_caballus
ENSSMAG00000012769	tarbp2	85	62.821	ENSEEUG00000001128	-	99	62.179	Erinaceus_europaeus
ENSSMAG00000012769	tarbp2	100	85.028	ENSELUG00000010642	tarbp2	100	85.876	Esox_lucius
ENSSMAG00000012769	tarbp2	100	65.395	ENSFCAG00000007757	TARBP2	100	65.940	Felis_catus
ENSSMAG00000012769	tarbp2	100	65.574	ENSFDAG00000011932	TARBP2	100	67.755	Fukomys_damarensis
ENSSMAG00000012769	tarbp2	94	90.606	ENSFHEG00000016118	tarbp2	100	90.606	Fundulus_heteroclitus
ENSSMAG00000012769	tarbp2	100	85.269	ENSGMOG00000001290	tarbp2	100	85.269	Gadus_morhua
ENSSMAG00000012769	tarbp2	64	69.778	ENSGALG00000038939	-	83	71.689	Gallus_gallus
ENSSMAG00000012769	tarbp2	100	90.028	ENSGAFG00000013341	tarbp2	100	90.028	Gambusia_affinis
ENSSMAG00000012769	tarbp2	100	88.366	ENSGACG00000006645	tarbp2	100	86.704	Gasterosteus_aculeatus
ENSSMAG00000012769	tarbp2	100	67.302	ENSGAGG00000021169	TARBP2	100	67.030	Gopherus_agassizii
ENSSMAG00000012769	tarbp2	100	65.027	ENSGGOG00000012637	TARBP2	94	77.027	Gorilla_gorilla
ENSSMAG00000012769	tarbp2	100	91.453	ENSHBUG00000018639	tarbp2	100	91.453	Haplochromis_burtoni
ENSSMAG00000012769	tarbp2	100	65.301	ENSHGLG00000001284	TARBP2	100	65.395	Heterocephalus_glaber_female
ENSSMAG00000012769	tarbp2	100	65.301	ENSHGLG00100011274	TARBP2	100	65.395	Heterocephalus_glaber_male
ENSSMAG00000012769	tarbp2	100	84.900	ENSHCOG00000001027	tarbp2	100	84.900	Hippocampus_comes
ENSSMAG00000012769	tarbp2	100	81.408	ENSIPUG00000023701	tarbp2	100	80.563	Ictalurus_punctatus
ENSSMAG00000012769	tarbp2	100	66.393	ENSSTOG00000003678	TARBP2	100	67.213	Ictidomys_tridecemlineatus
ENSSMAG00000012769	tarbp2	100	92.023	ENSKMAG00000012142	tarbp2	100	92.023	Kryptolebias_marmoratus
ENSSMAG00000012769	tarbp2	100	90.833	ENSLBEG00000015027	tarbp2	100	90.000	Labrus_bergylta
ENSSMAG00000012769	tarbp2	75	91.228	ENSLACG00000007087	TARBP2	84	92.982	Latimeria_chalumnae
ENSSMAG00000012769	tarbp2	100	78.814	ENSLOCG00000005711	tarbp2	100	78.977	Lepisosteus_oculatus
ENSSMAG00000012769	tarbp2	73	62.595	ENSLAFG00000002620	TARBP2	95	60.949	Loxodonta_africana
ENSSMAG00000012769	tarbp2	100	65.027	ENSMFAG00000013567	TARBP2	94	77.027	Macaca_fascicularis
ENSSMAG00000012769	tarbp2	100	65.301	ENSMMUG00000018492	TARBP2	100	65.123	Macaca_mulatta
ENSSMAG00000012769	tarbp2	100	65.027	ENSMNEG00000036477	TARBP2	94	77.027	Macaca_nemestrina
ENSSMAG00000012769	tarbp2	100	65.027	ENSMLEG00000029583	TARBP2	94	77.027	Mandrillus_leucophaeus
ENSSMAG00000012769	tarbp2	95	90.090	ENSMAMG00000010272	tarbp2	97	86.782	Mastacembelus_armatus
ENSSMAG00000012769	tarbp2	100	91.453	ENSMZEG00005006895	tarbp2	100	91.453	Maylandia_zebra
ENSSMAG00000012769	tarbp2	100	65.205	ENSMAUG00000019805	Tarbp2	100	65.027	Mesocricetus_auratus
ENSSMAG00000012769	tarbp2	95	66.106	ENSMICG00000027441	TARBP2	94	77.027	Microcebus_murinus
ENSSMAG00000012769	tarbp2	100	66.125	ENSMOCG00000003691	Tarbp2	100	66.120	Microtus_ochrogaster
ENSSMAG00000012769	tarbp2	95	88.462	ENSMMOG00000010374	tarbp2	100	87.097	Mola_mola
ENSSMAG00000012769	tarbp2	100	92.593	ENSMALG00000009773	tarbp2	100	92.593	Monopterus_albus
ENSSMAG00000012769	tarbp2	100	65.479	MGP_CAROLIEiJ_G0020356	Tarbp2	91	92.453	Mus_caroli
ENSSMAG00000012769	tarbp2	100	65.479	ENSMUSG00000023051	Tarbp2	91	92.453	Mus_musculus
ENSSMAG00000012769	tarbp2	100	65.205	MGP_PahariEiJ_G0020355	Tarbp2	91	92.453	Mus_pahari
ENSSMAG00000012769	tarbp2	100	65.479	MGP_SPRETEiJ_G0021249	Tarbp2	91	92.453	Mus_spretus
ENSSMAG00000012769	tarbp2	100	65.312	ENSMPUG00000005944	TARBP2	100	65.668	Mustela_putorius_furo
ENSSMAG00000012769	tarbp2	100	66.393	ENSMLUG00000010035	TARBP2	100	66.213	Myotis_lucifugus
ENSSMAG00000012769	tarbp2	100	65.027	ENSNLEG00000017690	TARBP2	94	77.027	Nomascus_leucogenys
ENSSMAG00000012769	tarbp2	96	70.326	ENSMEUG00000001916	TARBP2	96	69.436	Notamacropus_eugenii
ENSSMAG00000012769	tarbp2	64	69.163	ENSOPRG00000011397	TARBP2	98	71.041	Ochotona_princeps
ENSSMAG00000012769	tarbp2	62	70.354	ENSODEG00000013413	TARBP2	100	70.044	Octodon_degus
ENSSMAG00000012769	tarbp2	99	86.704	ENSONIG00000005115	tarbp2	96	89.368	Oreochromis_niloticus
ENSSMAG00000012769	tarbp2	100	65.684	ENSOCUG00000005700	TARBP2	100	66.120	Oryctolagus_cuniculus
ENSSMAG00000012769	tarbp2	100	90.028	ENSORLG00000005209	tarbp2	100	90.028	Oryzias_latipes
ENSSMAG00000012769	tarbp2	100	90.313	ENSORLG00020017755	tarbp2	100	90.313	Oryzias_latipes_hni
ENSSMAG00000012769	tarbp2	100	90.028	ENSORLG00015013237	tarbp2	100	90.028	Oryzias_latipes_hsok
ENSSMAG00000012769	tarbp2	100	91.453	ENSOMEG00000018860	tarbp2	100	91.453	Oryzias_melastigma
ENSSMAG00000012769	tarbp2	100	65.583	ENSOGAG00000001744	TARBP2	100	65.027	Otolemur_garnettii
ENSSMAG00000012769	tarbp2	100	65.301	ENSOARG00000016437	TARBP2	100	65.395	Ovis_aries
ENSSMAG00000012769	tarbp2	100	65.027	ENSPPAG00000030429	TARBP2	94	77.027	Pan_paniscus
ENSSMAG00000012769	tarbp2	100	65.574	ENSPPRG00000000189	TARBP2	100	65.940	Panthera_pardus
ENSSMAG00000012769	tarbp2	100	67.127	ENSPTIG00000007859	TARBP2	100	66.205	Panthera_tigris_altaica
ENSSMAG00000012769	tarbp2	100	65.027	ENSPTRG00000005020	TARBP2	94	77.027	Pan_troglodytes
ENSSMAG00000012769	tarbp2	100	65.027	ENSPANG00000010689	TARBP2	94	77.027	Papio_anubis
ENSSMAG00000012769	tarbp2	100	77.624	ENSPKIG00000002455	tarbp2	100	77.624	Paramormyrops_kingsleyae
ENSSMAG00000012769	tarbp2	100	88.889	ENSPMGG00000006497	tarbp2	100	88.889	Periophthalmus_magnuspinnatus
ENSSMAG00000012769	tarbp2	100	64.228	ENSPEMG00000014285	Tarbp2	100	64.208	Peromyscus_maniculatus_bairdii
ENSSMAG00000012769	tarbp2	93	60.429	ENSPMAG00000000105	tarbp2	99	60.245	Petromyzon_marinus
ENSSMAG00000012769	tarbp2	100	68.091	ENSPCIG00000006672	TARBP2	92	67.236	Phascolarctos_cinereus
ENSSMAG00000012769	tarbp2	100	90.598	ENSPFOG00000007586	tarbp2	100	90.598	Poecilia_formosa
ENSSMAG00000012769	tarbp2	100	90.313	ENSPLAG00000017659	tarbp2	100	90.313	Poecilia_latipinna
ENSSMAG00000012769	tarbp2	100	90.598	ENSPMEG00000007775	tarbp2	100	90.598	Poecilia_mexicana
ENSSMAG00000012769	tarbp2	100	90.598	ENSPREG00000007815	tarbp2	100	90.598	Poecilia_reticulata
ENSSMAG00000012769	tarbp2	97	63.953	ENSPPYG00000004583	TARBP2	100	62.327	Pongo_abelii
ENSSMAG00000012769	tarbp2	80	62.887	ENSPCAG00000005352	TARBP2	61	70.222	Procavia_capensis
ENSSMAG00000012769	tarbp2	100	65.574	ENSPCOG00000013102	TARBP2	94	77.027	Propithecus_coquereli
ENSSMAG00000012769	tarbp2	100	65.301	ENSPVAG00000012286	TARBP2	100	64.754	Pteropus_vampyrus
ENSSMAG00000012769	tarbp2	100	91.738	ENSPNYG00000014125	tarbp2	100	91.738	Pundamilia_nyererei
ENSSMAG00000012769	tarbp2	100	79.830	ENSPNAG00000011128	tarbp2	100	82.386	Pygocentrus_nattereri
ENSSMAG00000012769	tarbp2	100	65.753	ENSRNOG00000042355	Tarbp2	100	65.574	Rattus_norvegicus
ENSSMAG00000012769	tarbp2	100	65.027	ENSRBIG00000027150	TARBP2	94	77.027	Rhinopithecus_bieti
ENSSMAG00000012769	tarbp2	100	65.027	ENSRROG00000044783	TARBP2	94	77.027	Rhinopithecus_roxellana
ENSSMAG00000012769	tarbp2	100	65.847	ENSSBOG00000027305	TARBP2	94	77.027	Saimiri_boliviensis_boliviensis
ENSSMAG00000012769	tarbp2	96	69.253	ENSSHAG00000007064	TARBP2	100	70.303	Sarcophilus_harrisii
ENSSMAG00000012769	tarbp2	100	79.178	ENSSFOG00015010784	tarbp2	100	78.571	Scleropages_formosus
ENSSMAG00000012769	tarbp2	100	93.732	ENSSDUG00000018818	tarbp2	100	93.732	Seriola_dumerili
ENSSMAG00000012769	tarbp2	100	93.162	ENSSLDG00000001835	tarbp2	100	93.162	Seriola_lalandi_dorsalis
ENSSMAG00000012769	tarbp2	76	64.734	ENSSARG00000001010	TARBP2	72	66.667	Sorex_araneus
ENSSMAG00000012769	tarbp2	62	89.474	ENSSPUG00000005895	TARBP2	67	86.441	Sphenodon_punctatus
ENSSMAG00000012769	tarbp2	100	93.447	ENSSPAG00000022797	tarbp2	100	93.447	Stegastes_partitus
ENSSMAG00000012769	tarbp2	100	65.574	ENSSSCG00000000276	TARBP2	100	67.341	Sus_scrofa
ENSSMAG00000012769	tarbp2	71	56.154	ENSTGUG00000017031	TARBP2	100	54.074	Taeniopygia_guttata
ENSSMAG00000012769	tarbp2	100	89.744	ENSTRUG00000014379	tarbp2	100	89.744	Takifugu_rubripes
ENSSMAG00000012769	tarbp2	100	89.744	ENSTNIG00000007065	tarbp2	100	89.744	Tetraodon_nigroviridis
ENSSMAG00000012769	tarbp2	50	65.922	ENSTBEG00000012751	-	55	68.208	Tupaia_belangeri
ENSSMAG00000012769	tarbp2	100	64.516	ENSTTRG00000017177	TARBP2	100	65.027	Tursiops_truncatus
ENSSMAG00000012769	tarbp2	100	65.847	ENSUAMG00000009011	TARBP2	100	65.940	Ursus_americanus
ENSSMAG00000012769	tarbp2	100	63.710	ENSUMAG00000010461	TARBP2	100	63.539	Ursus_maritimus
ENSSMAG00000012769	tarbp2	100	65.027	ENSVVUG00000028150	TARBP2	100	67.052	Vulpes_vulpes
ENSSMAG00000012769	tarbp2	99	66.942	ENSXETG00000012644	tarbp2	99	67.318	Xenopus_tropicalis
ENSSMAG00000012769	tarbp2	100	90.598	ENSXMAG00000017836	tarbp2	100	90.598	Xiphophorus_maculatus