EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSSMAG00000012843 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Scophthalmus_maximus
Status: putative
Strand: Minus strand
Length: 2004 bases
Position: chr3:11711937-11713940
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSMAP00000020942	MMR_HSR1	PF01926.23	6.5e-05	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSMAT00000021193	-	1682	-	ENSSMAP00000020942	207 (aa)	-	A0A2U9B597

Gene Model

Click here to download ENSSMAG00000012843's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSMAG00000012843's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSSMAG00000012843	-	75	40.645	ENSSMAG00000006539	arl5a	85	40.645
ENSSMAG00000012843	-	77	37.423	ENSSMAG00000021333	ARL6	86	37.423
ENSSMAG00000012843	-	81	50.595	ENSSMAG00000018796	-	92	50.595
ENSSMAG00000012843	-	76	44.304	ENSSMAG00000017643	arl2	84	44.304
ENSSMAG00000012843	-	77	49.686	ENSSMAG00000011361	arf5	93	49.677
ENSSMAG00000012843	-	66	32.168	ENSSMAG00000016740	arl8ba	76	32.168
ENSSMAG00000012843	-	81	51.190	ENSSMAG00000001861	arf3b	91	51.190
ENSSMAG00000012843	-	81	50.581	ENSSMAG00000006125	-	94	50.581
ENSSMAG00000012843	-	76	44.720	ENSSMAG00000016399	arl4cb	84	44.720
ENSSMAG00000012843	-	76	37.278	ENSSMAG00000001351	arfrp1	73	37.278
ENSSMAG00000012843	-	61	35.433	ENSSMAG00000007106	sar1b	50	35.433
ENSSMAG00000012843	-	77	53.459	ENSSMAG00000010770	arf2b	86	53.459
ENSSMAG00000012843	-	68	51.049	ENSSMAG00000006815	ARF6	95	51.049
ENSSMAG00000012843	-	76	42.857	ENSSMAG00000015059	arl4aa	81	42.857
ENSSMAG00000012843	-	66	31.387	ENSSMAG00000015087	arl8a	72	31.387
ENSSMAG00000012843	-	79	47.239	ENSSMAG00000000005	arl11	93	47.239
ENSSMAG00000012843	-	66	31.387	ENSSMAG00000015130	arl8bb	73	31.387
ENSSMAG00000012843	-	77	51.572	ENSSMAG00000004541	-	87	51.572
ENSSMAG00000012843	-	78	41.818	ENSSMAG00000008394	arl4d	83	41.818
ENSSMAG00000012843	-	81	32.275	ENSSMAG00000007588	-	92	32.275
ENSSMAG00000012843	-	86	40.984	ENSSMAG00000017183	-	92	40.984
ENSSMAG00000012843	-	77	34.503	ENSSMAG00000002165	-	85	34.503
ENSSMAG00000012843	-	79	42.424	ENSSMAG00000010552	arl5c	88	42.424
ENSSMAG00000012843	-	85	41.714	ENSSMAG00000016416	arl1	93	41.714
ENSSMAG00000012843	-	83	42.697	ENSSMAG00000013072	-	92	42.697
ENSSMAG00000012843	-	81	51.190	ENSSMAG00000002927	-	91	51.190
ENSSMAG00000012843	-	81	38.150	ENSSMAG00000011578	arl8	95	38.150
ENSSMAG00000012843	-	77	44.025	ENSSMAG00000005803	arl3	86	44.025
ENSSMAG00000012843	-	56	31.034	ENSSMAG00000020758	sar1ab	82	31.034
ENSSMAG00000012843	-	78	40.123	ENSSMAG00000003002	arl3l2	80	40.123
ENSSMAG00000012843	-	75	44.086	ENSSMAG00000002487	-	87	44.086
ENSSMAG00000012843	-	78	43.114	ENSSMAG00000014218	-	83	43.114

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSMAG00000012843	-	86	54.098	ENSACIG00000013244	arl14	89	54.098	Amphilophus_citrinellus
ENSSMAG00000012843	-	99	84.951	ENSACLG00000015415	-	99	84.951	Astatotilapia_calliptera
ENSSMAG00000012843	-	86	53.889	ENSACLG00000026984	arl14	89	53.889	Astatotilapia_calliptera
ENSSMAG00000012843	-	98	79.310	ENSCSEG00000017926	-	99	79.310	Cynoglossus_semilaevis
ENSSMAG00000012843	-	91	55.897	ENSDARG00000063223	arl14	97	55.897	Danio_rerio
ENSSMAG00000012843	-	92	65.263	ENSELUG00000024060	-	67	65.263	Esox_lucius
ENSSMAG00000012843	-	90	53.158	ENSFHEG00000018721	arl14	94	53.158	Fundulus_heteroclitus
ENSSMAG00000012843	-	75	55.414	ENSGMOG00000020214	arl14	94	55.414	Gadus_morhua
ENSSMAG00000012843	-	94	82.564	ENSGAFG00000012819	-	99	82.564	Gambusia_affinis
ENSSMAG00000012843	-	82	58.580	ENSGACG00000013840	arl14	93	58.580	Gasterosteus_aculeatus
ENSSMAG00000012843	-	88	83.060	ENSGACG00000010096	-	100	83.060	Gasterosteus_aculeatus
ENSSMAG00000012843	-	86	53.889	ENSHBUG00000001159	arl14	89	53.889	Haplochromis_burtoni
ENSSMAG00000012843	-	90	51.832	ENSHCOG00000009562	arl14	90	51.832	Hippocampus_comes
ENSSMAG00000012843	-	99	78.155	ENSKMAG00000020389	-	99	78.155	Kryptolebias_marmoratus
ENSSMAG00000012843	-	91	54.167	ENSKMAG00000010409	arl14	96	54.167	Kryptolebias_marmoratus
ENSSMAG00000012843	-	95	51.208	ENSLBEG00000021116	arl14	97	51.208	Labrus_bergylta
ENSSMAG00000012843	-	86	57.542	ENSMAMG00000011773	arl14	89	57.542	Mastacembelus_armatus
ENSSMAG00000012843	-	100	85.507	ENSMAMG00000012474	-	100	85.507	Mastacembelus_armatus
ENSSMAG00000012843	-	86	53.889	ENSMZEG00005025506	arl14	89	53.889	Maylandia_zebra
ENSSMAG00000012843	-	99	84.951	ENSMZEG00005000218	-	99	84.951	Maylandia_zebra
ENSSMAG00000012843	-	99	85.922	ENSONIG00000003641	-	88	85.922	Oreochromis_niloticus
ENSSMAG00000012843	-	85	53.672	ENSONIG00000009954	arl14	85	53.672	Oreochromis_niloticus
ENSSMAG00000012843	-	89	49.733	ENSORLG00000027330	arl14	100	49.733	Oryzias_latipes
ENSSMAG00000012843	-	89	49.733	ENSORLG00020014120	arl14	100	49.733	Oryzias_latipes_hni
ENSSMAG00000012843	-	89	49.733	ENSORLG00015014176	arl14	100	49.733	Oryzias_latipes_hsok
ENSSMAG00000012843	-	79	53.333	ENSOMEG00000016904	arl14	90	53.333	Oryzias_melastigma
ENSSMAG00000012843	-	82	53.216	ENSPFOG00000020069	arl14	86	53.216	Poecilia_formosa
ENSSMAG00000012843	-	99	79.612	ENSPFOG00000012216	-	97	79.612	Poecilia_formosa
ENSSMAG00000012843	-	77	54.658	ENSPLAG00000017362	arl14	93	54.658	Poecilia_latipinna
ENSSMAG00000012843	-	99	78.155	ENSPMEG00000008427	-	99	78.155	Poecilia_mexicana
ENSSMAG00000012843	-	99	81.068	ENSPREG00000001895	-	99	81.068	Poecilia_reticulata
ENSSMAG00000012843	-	82	55.556	ENSPREG00000001976	arl14	85	55.556	Poecilia_reticulata
ENSSMAG00000012843	-	90	86.559	ENSPNYG00000006844	-	97	86.559	Pundamilia_nyererei
ENSSMAG00000012843	-	52	87.037	ENSSDUG00000023723	-	96	87.037	Seriola_dumerili
ENSSMAG00000012843	-	100	88.406	ENSSLDG00000006512	-	100	88.406	Seriola_lalandi_dorsalis
ENSSMAG00000012843	-	81	55.621	ENSSPAG00000014539	arl14	83	55.621	Stegastes_partitus
ENSSMAG00000012843	-	99	86.408	ENSSPAG00000014422	-	99	86.408	Stegastes_partitus
ENSSMAG00000012843	-	86	54.749	ENSTNIG00000015242	-	92	54.749	Tetraodon_nigroviridis
ENSSMAG00000012843	-	99	81.553	ENSXMAG00000021386	-	99	81.553	Xiphophorus_maculatus