EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSSMAG00000012898 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Scophthalmus_maximus
Status: putative
Strand: Plus strand
Length: 1914 bases
Position: chr17:17729847-17731760
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSMAP00000021041	RVT_1	PF00078.27	3.1e-45	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSMAT00000021294	-	1914	-	ENSSMAP00000021041	589 (aa)	-	-

Gene Model

Click here to download ENSSMAG00000012898's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSMAG00000012898's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSSMAG00000012898	-	100	98.981	ENSSMAG00000002122	-	79	98.981
ENSSMAG00000012898	-	100	98.472	ENSSMAG00000011751	-	77	98.472
ENSSMAG00000012898	-	67	98.990	ENSSMAG00000002801	-	83	98.990
ENSSMAG00000012898	-	68	98.744	ENSSMAG00000005557	-	100	98.744
ENSSMAG00000012898	-	100	98.812	ENSSMAG00000015938	-	56	98.812
ENSSMAG00000012898	-	100	99.321	ENSSMAG00000001945	-	75	99.321
ENSSMAG00000012898	-	100	99.151	ENSSMAG00000012694	-	88	99.151

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSMAG00000012898	-	95	71.301	ENSATEG00000009553	-	54	71.708	Anabas_testudineus
ENSSMAG00000012898	-	99	73.299	ENSATEG00000020292	-	54	73.345	Anabas_testudineus
ENSSMAG00000012898	-	99	73.299	ENSATEG00000014941	-	58	73.217	Anabas_testudineus
ENSSMAG00000012898	-	99	73.639	ENSATEG00000017504	-	54	73.693	Anabas_testudineus
ENSSMAG00000012898	-	99	73.639	ENSATEG00000010056	-	54	73.693	Anabas_testudineus
ENSSMAG00000012898	-	83	73.673	ENSATEG00000009235	-	51	73.673	Anabas_testudineus
ENSSMAG00000012898	-	88	74.088	ENSATEG00000014139	-	53	74.088	Anabas_testudineus
ENSSMAG00000012898	-	99	73.810	ENSATEG00000023604	-	54	73.868	Anabas_testudineus
ENSSMAG00000012898	-	95	73.929	ENSATEG00000024954	-	54	73.929	Anabas_testudineus
ENSSMAG00000012898	-	99	73.639	ENSATEG00000014211	-	65	73.565	Anabas_testudineus
ENSSMAG00000012898	-	84	75.453	ENSACLG00000001165	-	94	75.620	Astatotilapia_calliptera
ENSSMAG00000012898	-	99	73.322	ENSACLG00000019356	-	97	73.415	Astatotilapia_calliptera
ENSSMAG00000012898	-	99	73.494	ENSACLG00000018836	-	97	73.592	Astatotilapia_calliptera
ENSSMAG00000012898	-	78	77.174	ENSACLG00000005592	-	94	75.652	Astatotilapia_calliptera
ENSSMAG00000012898	-	95	72.598	ENSACLG00000000593	-	65	72.598	Astatotilapia_calliptera
ENSSMAG00000012898	-	99	73.299	ENSAMXG00000039954	-	73	73.345	Astyanax_mexicanus
ENSSMAG00000012898	-	77	83.333	ENSELUG00000020034	-	96	83.333	Esox_lucius
ENSSMAG00000012898	-	57	84.431	ENSELUG00000021052	-	97	84.431	Esox_lucius
ENSSMAG00000012898	-	84	75.354	ENSELUG00000024014	-	97	75.676	Esox_lucius
ENSSMAG00000012898	-	83	87.117	ENSELUG00000008022	-	97	86.912	Esox_lucius
ENSSMAG00000012898	-	57	84.985	ENSELUG00000012091	-	99	84.985	Esox_lucius
ENSSMAG00000012898	-	53	73.312	ENSMAMG00000023382	-	77	73.312	Mastacembelus_armatus
ENSSMAG00000012898	-	92	38.556	ENSORLG00000029318	-	59	38.137	Oryzias_latipes
ENSSMAG00000012898	-	99	71.429	ENSORLG00000029966	-	74	71.478	Oryzias_latipes
ENSSMAG00000012898	-	54	60.063	ENSORLG00000029683	-	74	60.645	Oryzias_latipes
ENSSMAG00000012898	-	99	71.429	ENSORLG00000029282	-	65	71.478	Oryzias_latipes
ENSSMAG00000012898	-	99	71.601	ENSORLG00000027144	-	98	71.655	Oryzias_latipes
ENSSMAG00000012898	-	72	69.321	ENSORLG00000026257	-	100	69.321	Oryzias_latipes
ENSSMAG00000012898	-	80	34.728	ENSORLG00000029093	-	96	34.820	Oryzias_latipes
ENSSMAG00000012898	-	92	38.380	ENSORLG00000028947	-	59	37.961	Oryzias_latipes
ENSSMAG00000012898	-	92	38.028	ENSORLG00000030217	-	68	37.610	Oryzias_latipes
ENSSMAG00000012898	-	99	70.918	ENSORLG00000029262	-	74	70.957	Oryzias_latipes
ENSSMAG00000012898	-	99	71.429	ENSORLG00000025024	-	54	71.603	Oryzias_latipes
ENSSMAG00000012898	-	55	70.245	ENSORLG00000017274	-	100	70.245	Oryzias_latipes
ENSSMAG00000012898	-	92	38.204	ENSORLG00000028726	-	67	37.786	Oryzias_latipes
ENSSMAG00000012898	-	92	38.380	ENSORLG00000028029	-	59	37.961	Oryzias_latipes
ENSSMAG00000012898	-	79	70.236	ENSORLG00000029299	-	99	70.236	Oryzias_latipes
ENSSMAG00000012898	-	99	71.769	ENSORLG00020001879	-	74	71.826	Oryzias_latipes_hni
ENSSMAG00000012898	-	50	36.610	ENSORLG00020016970	-	66	37.319	Oryzias_latipes_hni
ENSSMAG00000012898	-	99	71.429	ENSORLG00020018851	-	98	71.479	Oryzias_latipes_hni
ENSSMAG00000012898	-	92	38.354	ENSORLG00020020316	-	59	38.272	Oryzias_latipes_hni
ENSSMAG00000012898	-	87	37.361	ENSORLG00020002875	-	59	37.266	Oryzias_latipes_hni
ENSSMAG00000012898	-	92	37.828	ENSORLG00020009614	-	59	37.743	Oryzias_latipes_hni
ENSSMAG00000012898	-	99	70.578	ENSORLG00020009508	-	54	70.732	Oryzias_latipes_hni
ENSSMAG00000012898	-	92	71.481	ENSORLG00015011987	-	100	71.481	Oryzias_latipes_hsok
ENSSMAG00000012898	-	83	37.209	ENSORLG00015000605	-	58	37.109	Oryzias_latipes_hsok
ENSSMAG00000012898	-	99	71.429	ENSORLG00015020439	-	98	71.479	Oryzias_latipes_hsok
ENSSMAG00000012898	-	91	37.722	ENSORLG00015005190	-	99	37.726	Oryzias_latipes_hsok
ENSSMAG00000012898	-	72	67.765	ENSORLG00015011242	-	96	67.765	Oryzias_latipes_hsok
ENSSMAG00000012898	-	76	38.004	ENSORLG00015016973	-	99	38.116	Oryzias_latipes_hsok
ENSSMAG00000012898	-	59	39.335	ENSORLG00015006988	-	99	39.496	Oryzias_latipes_hsok
ENSSMAG00000012898	-	57	38.636	ENSORLG00015022301	-	99	39.080	Oryzias_latipes_hsok
ENSSMAG00000012898	-	85	71.486	ENSORLG00015008483	-	100	71.486	Oryzias_latipes_hsok
ENSSMAG00000012898	-	53	42.945	ENSORLG00015017095	-	93	42.857	Oryzias_latipes_hsok
ENSSMAG00000012898	-	99	72.109	ENSOMEG00000013646	-	74	72.348	Oryzias_melastigma
ENSSMAG00000012898	-	99	72.449	ENSOMEG00000000581	-	54	72.648	Oryzias_melastigma
ENSSMAG00000012898	-	95	72.711	ENSOMEG00000010058	-	54	72.711	Oryzias_melastigma
ENSSMAG00000012898	-	99	72.289	ENSOMEG00000022295	-	98	72.359	Oryzias_melastigma
ENSSMAG00000012898	-	99	72.619	ENSOMEG00000019233	-	74	72.696	Oryzias_melastigma
ENSSMAG00000012898	-	99	72.461	ENSOMEG00000019854	-	98	72.535	Oryzias_melastigma
ENSSMAG00000012898	-	99	72.449	ENSOMEG00000007004	-	54	72.648	Oryzias_melastigma
ENSSMAG00000012898	-	99	72.449	ENSOMEG00000016368	-	74	72.522	Oryzias_melastigma
ENSSMAG00000012898	-	54	34.146	ENSPSIG00000001069	-	84	33.945	Pelodiscus_sinensis
ENSSMAG00000012898	-	52	30.189	ENSPSIG00000000970	-	84	30.625	Pelodiscus_sinensis
ENSSMAG00000012898	-	71	70.629	ENSPREG00000009633	-	88	70.629	Poecilia_reticulata
ENSSMAG00000012898	-	95	74.327	ENSSFOG00015014529	-	57	74.327	Scleropages_formosus
ENSSMAG00000012898	-	99	72.959	ENSSFOG00015007656	-	63	73.171	Scleropages_formosus
ENSSMAG00000012898	-	93	73.443	ENSSFOG00015004005	-	54	73.443	Scleropages_formosus
ENSSMAG00000012898	-	99	73.129	ENSSFOG00015000961	-	57	73.345	Scleropages_formosus
ENSSMAG00000012898	-	99	73.129	ENSSFOG00015021945	-	53	73.345	Scleropages_formosus
ENSSMAG00000012898	-	99	72.959	ENSSFOG00015016653	-	53	73.171	Scleropages_formosus
ENSSMAG00000012898	-	96	72.487	ENSSFOG00015011969	-	77	72.487	Scleropages_formosus
ENSSMAG00000012898	-	97	72.997	ENSSFOG00015020002	-	54	72.997	Scleropages_formosus
ENSSMAG00000012898	-	99	74.150	ENSXMAG00000021961	-	54	74.042	Xiphophorus_maculatus
ENSSMAG00000012898	-	99	73.810	ENSXMAG00000023179	-	54	73.693	Xiphophorus_maculatus
ENSSMAG00000012898	-	99	72.619	ENSXMAG00000021177	-	75	72.619	Xiphophorus_maculatus
ENSSMAG00000012898	-	99	73.891	ENSXMAG00000023308	-	54	73.693	Xiphophorus_maculatus
ENSSMAG00000012898	-	99	72.789	ENSXMAG00000022769	-	75	72.789	Xiphophorus_maculatus
ENSSMAG00000012898	-	99	73.980	ENSXMAG00000025249	-	74	73.739	Xiphophorus_maculatus
ENSSMAG00000012898	-	83	75.869	ENSXMAG00000029351	-	99	75.869	Xiphophorus_maculatus
ENSSMAG00000012898	-	99	73.639	ENSXMAG00000025224	-	73	73.391	Xiphophorus_maculatus