EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSSMAG00000012930 (Gene tree)
Gene ID: -
Gene Symbol: slirp
Alias: sb:cb657|si:ch73-276n11.1
Full Name: SRA stem-loop interacting RNA binding protein
Gene Type: protein_coding
Species: Scophthalmus_maximus
Status: putative
Strand: Plus strand
Length: 2904 bases
Position: chr17:17796296-17799199
Accession: ZDB-GENE-030729-30
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSMAP00000021090	RRM_1	PF00076.22	7.1e-11	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSMAT00000021342	-	937	-	ENSSMAP00000021090	102 (aa)	-	-

Gene Model

Click here to download ENSSMAG00000012930's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSMAG00000012930's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSMAG00000012930	slirp	73	47.297	ENSG00000119705	SLIRP	87	46.970	Homo_sapiens
ENSSMAG00000012930	slirp	100	52.941	ENSAPOG00000001298	slirp	100	52.941	Acanthochromis_polyacanthus
ENSSMAG00000012930	slirp	69	50.000	ENSAMEG00000003975	SLIRP	77	50.000	Ailuropoda_melanoleuca
ENSSMAG00000012930	slirp	98	55.000	ENSACIG00000023083	slirp	97	55.000	Amphilophus_citrinellus
ENSSMAG00000012930	slirp	98	53.000	ENSAOCG00000006342	slirp	99	53.000	Amphiprion_ocellaris
ENSSMAG00000012930	slirp	97	52.525	ENSAPEG00000015719	-	99	52.525	Amphiprion_percula
ENSSMAG00000012930	slirp	98	53.000	ENSAPEG00000015917	slirp	99	53.000	Amphiprion_percula
ENSSMAG00000012930	slirp	100	52.941	ENSATEG00000013525	slirp	100	52.941	Anabas_testudineus
ENSSMAG00000012930	slirp	98	46.000	ENSAMXG00000018693	slirp	98	46.000	Astyanax_mexicanus
ENSSMAG00000012930	slirp	73	44.595	ENSCJAG00000016946	SLIRP	71	45.455	Callithrix_jacchus
ENSSMAG00000012930	slirp	85	43.678	ENSCAFG00020015876	-	78	43.678	Canis_lupus_dingo
ENSSMAG00000012930	slirp	73	44.595	ENSCCAG00000030130	SLIRP	69	44.595	Cebus_capucinus
ENSSMAG00000012930	slirp	89	41.758	ENSCATG00000036327	SLIRP	80	41.758	Cercocebus_atys
ENSSMAG00000012930	slirp	89	42.857	ENSCSAG00000011736	SLIRP	80	42.857	Chlorocebus_sabaeus
ENSSMAG00000012930	slirp	79	49.383	ENSCPBG00000026327	SLIRP	82	49.383	Chrysemys_picta_bellii
ENSSMAG00000012930	slirp	65	50.000	ENSCANG00000032892	SLIRP	89	44.828	Colobus_angolensis_palliatus
ENSSMAG00000012930	slirp	98	33.663	ENSCGRG00001024068	Slirp	91	33.663	Cricetulus_griseus_chok1gshd
ENSSMAG00000012930	slirp	98	33.663	ENSCGRG00000017440	Slirp	91	33.663	Cricetulus_griseus_crigri
ENSSMAG00000012930	slirp	80	48.780	ENSCSEG00000015766	slirp	84	48.780	Cynoglossus_semilaevis
ENSSMAG00000012930	slirp	77	59.494	ENSCVAG00000012504	slirp	78	59.494	Cyprinodon_variegatus
ENSSMAG00000012930	slirp	79	51.852	ENSDARG00000097753	slirp	82	52.381	Danio_rerio
ENSSMAG00000012930	slirp	73	45.946	ENSDNOG00000007721	SLIRP	67	45.946	Dasypus_novemcinctus
ENSSMAG00000012930	slirp	85	40.230	ENSDORG00000012379	Slirp	78	40.230	Dipodomys_ordii
ENSSMAG00000012930	slirp	73	44.595	ENSETEG00000010345	SLIRP	69	44.595	Echinops_telfairi
ENSSMAG00000012930	slirp	85	43.678	ENSEASG00005020193	SLIRP	78	43.678	Equus_asinus_asinus
ENSSMAG00000012930	slirp	87	43.820	ENSEEUG00000007257	SLIRP	87	43.820	Erinaceus_europaeus
ENSSMAG00000012930	slirp	100	47.059	ENSELUG00000016800	slirp	99	47.059	Esox_lucius
ENSSMAG00000012930	slirp	75	42.529	ENSFCAG00000036326	SLIRP	89	42.529	Felis_catus
ENSSMAG00000012930	slirp	76	47.436	ENSFALG00000012583	SLIRP	74	47.436	Ficedula_albicollis
ENSSMAG00000012930	slirp	85	44.828	ENSFDAG00000008347	SLIRP	77	44.828	Fukomys_damarensis
ENSSMAG00000012930	slirp	80	48.780	ENSFHEG00000004709	slirp	87	48.780	Fundulus_heteroclitus
ENSSMAG00000012930	slirp	97	48.485	ENSGMOG00000016948	slirp	93	48.485	Gadus_morhua
ENSSMAG00000012930	slirp	90	42.391	ENSGALG00000031238	SLIRP	92	42.391	Gallus_gallus
ENSSMAG00000012930	slirp	100	51.961	ENSGAFG00000010998	slirp	100	51.961	Gambusia_affinis
ENSSMAG00000012930	slirp	80	57.317	ENSGACG00000020137	slirp	95	57.317	Gasterosteus_aculeatus
ENSSMAG00000012930	slirp	78	50.000	ENSGAGG00000009953	SLIRP	55	50.000	Gopherus_agassizii
ENSSMAG00000012930	slirp	73	47.297	ENSGGOG00000011059	-	85	41.772	Gorilla_gorilla
ENSSMAG00000012930	slirp	85	43.678	ENSHGLG00000018491	SLIRP	78	43.678	Heterocephalus_glaber_female
ENSSMAG00000012930	slirp	85	43.678	ENSHGLG00100014153	SLIRP	78	43.678	Heterocephalus_glaber_male
ENSSMAG00000012930	slirp	96	50.000	ENSHCOG00000006795	slirp	97	50.000	Hippocampus_comes
ENSSMAG00000012930	slirp	95	49.000	ENSIPUG00000010214	SLIRP	100	49.000	Ictalurus_punctatus
ENSSMAG00000012930	slirp	85	41.379	ENSSTOG00000034316	SLIRP	78	41.379	Ictidomys_tridecemlineatus
ENSSMAG00000012930	slirp	100	48.039	ENSKMAG00000002038	slirp	96	48.039	Kryptolebias_marmoratus
ENSSMAG00000012930	slirp	100	50.000	ENSLBEG00000007564	slirp	100	50.000	Labrus_bergylta
ENSSMAG00000012930	slirp	97	47.475	ENSLACG00000013434	SLIRP	93	47.475	Latimeria_chalumnae
ENSSMAG00000012930	slirp	85	42.529	ENSMFAG00000042960	SLIRP	99	41.071	Macaca_fascicularis
ENSSMAG00000012930	slirp	74	45.333	ENSMMUG00000029256	SLIRP	71	48.485	Macaca_mulatta
ENSSMAG00000012930	slirp	85	42.529	ENSMNEG00000028921	SLIRP	99	41.071	Macaca_nemestrina
ENSSMAG00000012930	slirp	84	40.698	ENSMLEG00000043644	SLIRP	78	40.698	Mandrillus_leucophaeus
ENSSMAG00000012930	slirp	98	53.000	ENSMZEG00005004617	slirp	99	53.000	Maylandia_zebra
ENSSMAG00000012930	slirp	89	38.462	ENSMAUG00000003857	Slirp	80	38.462	Mesocricetus_auratus
ENSSMAG00000012930	slirp	88	40.000	ENSMICG00000012080	SLIRP	71	44.737	Microcebus_murinus
ENSSMAG00000012930	slirp	96	37.963	ENSMOCG00000016019	Slirp	96	37.963	Microtus_ochrogaster
ENSSMAG00000012930	slirp	100	51.961	ENSMMOG00000018268	slirp	100	51.961	Mola_mola
ENSSMAG00000012930	slirp	69	47.143	ENSMODG00000005207	-	99	47.143	Monodelphis_domestica
ENSSMAG00000012930	slirp	84	54.651	ENSMALG00000012581	slirp	88	54.651	Monopterus_albus
ENSSMAG00000012930	slirp	96	37.037	MGP_CAROLIEiJ_G0017995	Slirp	100	37.037	Mus_caroli
ENSSMAG00000012930	slirp	96	37.037	ENSMUSG00000021040	Slirp	96	37.037	Mus_musculus
ENSSMAG00000012930	slirp	96	37.037	MGP_SPRETEiJ_G0018840	Slirp	96	37.037	Mus_spretus
ENSSMAG00000012930	slirp	84	38.372	ENSMLUG00000024998	-	77	38.372	Myotis_lucifugus
ENSSMAG00000012930	slirp	96	39.796	ENSMLUG00000029544	-	87	39.796	Myotis_lucifugus
ENSSMAG00000012930	slirp	96	36.538	ENSNGAG00000016363	Slirp	100	36.538	Nannospalax_galili
ENSSMAG00000012930	slirp	90	41.304	ENSNLEG00000027238	-	80	45.714	Nomascus_leucogenys
ENSSMAG00000012930	slirp	90	41.304	ENSNLEG00000032459	-	81	41.304	Nomascus_leucogenys
ENSSMAG00000012930	slirp	85	45.977	ENSODEG00000012580	SLIRP	76	50.000	Octodon_degus
ENSSMAG00000012930	slirp	98	53.000	ENSONIG00000011692	slirp	99	53.000	Oreochromis_niloticus
ENSSMAG00000012930	slirp	95	41.414	ENSOANG00000022366	SLIRP	89	41.414	Ornithorhynchus_anatinus
ENSSMAG00000012930	slirp	100	55.882	ENSORLG00000010761	slirp	78	55.882	Oryzias_latipes
ENSSMAG00000012930	slirp	100	54.902	ENSORLG00020022188	slirp	100	54.902	Oryzias_latipes_hni
ENSSMAG00000012930	slirp	99	54.455	ENSORLG00015020171	slirp	98	54.455	Oryzias_latipes_hsok
ENSSMAG00000012930	slirp	100	56.863	ENSOMEG00000019321	slirp	100	56.863	Oryzias_melastigma
ENSSMAG00000012930	slirp	73	47.297	ENSPPAG00000040710	-	85	41.772	Pan_paniscus
ENSSMAG00000012930	slirp	75	42.529	ENSPPRG00000014350	SLIRP	89	42.529	Panthera_pardus
ENSSMAG00000012930	slirp	75	42.529	ENSPTIG00000014196	SLIRP	89	42.529	Panthera_tigris_altaica
ENSSMAG00000012930	slirp	73	47.297	ENSPTRG00000030691	SLIRP	85	41.772	Pan_troglodytes
ENSSMAG00000012930	slirp	89	42.857	ENSPANG00000026323	SLIRP	80	42.857	Papio_anubis
ENSSMAG00000012930	slirp	58	49.153	ENSPKIG00000008831	slirp	58	49.153	Paramormyrops_kingsleyae
ENSSMAG00000012930	slirp	78	55.000	ENSPMGG00000010541	slirp	92	55.000	Periophthalmus_magnuspinnatus
ENSSMAG00000012930	slirp	74	41.333	ENSPEMG00000013234	Slirp	87	40.449	Peromyscus_maniculatus_bairdii
ENSSMAG00000012930	slirp	86	38.636	ENSPMAG00000009355	slirp	98	38.636	Petromyzon_marinus
ENSSMAG00000012930	slirp	77	40.506	ENSPCIG00000026842	-	85	40.506	Phascolarctos_cinereus
ENSSMAG00000012930	slirp	96	56.122	ENSPFOG00000006758	slirp	96	56.122	Poecilia_formosa
ENSSMAG00000012930	slirp	96	57.143	ENSPLAG00000011140	slirp	96	57.143	Poecilia_latipinna
ENSSMAG00000012930	slirp	96	56.122	ENSPMEG00000019535	slirp	96	56.122	Poecilia_mexicana
ENSSMAG00000012930	slirp	96	56.122	ENSPREG00000011673	slirp	96	56.122	Poecilia_reticulata
ENSSMAG00000012930	slirp	73	47.297	ENSPPYG00000006030	SLIRP	68	47.297	Pongo_abelii
ENSSMAG00000012930	slirp	84	38.947	ENSPCOG00000015159	SLIRP	89	38.947	Propithecus_coquereli
ENSSMAG00000012930	slirp	98	50.000	ENSPNAG00000008633	slirp	99	50.000	Pygocentrus_nattereri
ENSSMAG00000012930	slirp	72	46.667	ENSRBIG00000031396	-	88	43.182	Rhinopithecus_bieti
ENSSMAG00000012930	slirp	73	44.595	ENSRBIG00000035817	-	68	44.595	Rhinopithecus_bieti
ENSSMAG00000012930	slirp	65	48.485	ENSRBIG00000032998	-	61	48.485	Rhinopithecus_bieti
ENSSMAG00000012930	slirp	73	48.649	ENSRBIG00000032222	-	71	48.485	Rhinopithecus_bieti
ENSSMAG00000012930	slirp	73	48.649	ENSRROG00000036656	-	71	48.485	Rhinopithecus_roxellana
ENSSMAG00000012930	slirp	70	49.296	ENSRROG00000041312	-	70	49.296	Rhinopithecus_roxellana
ENSSMAG00000012930	slirp	65	48.485	ENSRROG00000017133	-	69	48.485	Rhinopithecus_roxellana
ENSSMAG00000012930	slirp	72	48.000	ENSRROG00000035604	-	75	48.000	Rhinopithecus_roxellana
ENSSMAG00000012930	slirp	83	41.379	ENSSBOG00000020014	SLIRP	71	46.970	Saimiri_boliviensis_boliviensis
ENSSMAG00000012930	slirp	77	56.962	ENSSFOG00015011165	slirp	82	54.321	Scleropages_formosus
ENSSMAG00000012930	slirp	100	52.941	ENSSDUG00000021883	slirp	66	52.941	Seriola_dumerili
ENSSMAG00000012930	slirp	100	52.941	ENSSLDG00000023136	slirp	91	52.941	Seriola_lalandi_dorsalis
ENSSMAG00000012930	slirp	91	46.392	ENSSPUG00000009346	SLIRP	99	46.392	Sphenodon_punctatus
ENSSMAG00000012930	slirp	100	53.922	ENSSPAG00000013477	slirp	100	53.922	Stegastes_partitus
ENSSMAG00000012930	slirp	87	41.573	ENSSSCG00000028167	SLIRP	80	41.573	Sus_scrofa
ENSSMAG00000012930	slirp	76	46.154	ENSTGUG00000012337	SLIRP	74	46.154	Taeniopygia_guttata
ENSSMAG00000012930	slirp	98	47.525	ENSTRUG00000020127	slirp	98	47.525	Takifugu_rubripes
ENSSMAG00000012930	slirp	85	45.977	ENSUAMG00000022445	SLIRP	78	45.977	Ursus_americanus
ENSSMAG00000012930	slirp	85	44.828	ENSUMAG00000007166	SLIRP	78	44.828	Ursus_maritimus
ENSSMAG00000012930	slirp	81	41.935	ENSVPAG00000001781	SLIRP	86	41.935	Vicugna_pacos
ENSSMAG00000012930	slirp	87	42.697	ENSVVUG00000004436	SLIRP	99	40.000	Vulpes_vulpes
ENSSMAG00000012930	slirp	79	51.852	ENSXETG00000030343	SLIRP	91	51.852	Xenopus_tropicalis
ENSSMAG00000012930	slirp	100	52.941	ENSXCOG00000009422	slirp	100	52.941	Xiphophorus_couchianus
ENSSMAG00000012930	slirp	100	52.941	ENSXMAG00000015655	slirp	100	52.941	Xiphophorus_maculatus