EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSSMAG00000012988 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Scophthalmus_maximus
Status: putative
Strand: Minus strand
Length: 8916 bases
Position: chr1:18434017-18442932
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSMAP00000021190	AKAP7_NLS	PF10469.9	1.7e-17	1	1
ENSSMAP00000021181	AKAP7_NLS	PF10469.9	1.9e-17	1	1
ENSSMAP00000021214	AKAP7_NLS	PF10469.9	3.4e-10	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSMAT00000021443	-	5298	-	ENSSMAP00000021190	573 (aa)	-	A0A2U9AXS8
ENSSMAT00000021467	-	2204	-	ENSSMAP00000021214	538 (aa)	-	-
ENSSMAT00000021433	-	5101	-	ENSSMAP00000021181	602 (aa)	-	-

Gene Model

Click here to download ENSSMAG00000012988's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSMAG00000012988's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSMAG00000012988	-	99	57.618	ENSAPOG00000016038	-	98	57.268	Acanthochromis_polyacanthus
ENSSMAG00000012988	-	82	79.817	ENSACIG00000006238	-	99	79.817	Amphilophus_citrinellus
ENSSMAG00000012988	-	99	58.201	ENSAOCG00000012343	-	98	58.730	Amphiprion_ocellaris
ENSSMAG00000012988	-	99	58.377	ENSAPEG00000008438	-	98	58.907	Amphiprion_percula
ENSSMAG00000012988	-	91	59.770	ENSATEG00000022575	-	95	59.770	Anabas_testudineus
ENSSMAG00000012988	-	88	30.233	ENSACAG00000016906	LENG9	87	30.233	Anolis_carolinensis
ENSSMAG00000012988	-	99	67.470	ENSACLG00000021615	-	99	66.609	Astatotilapia_calliptera
ENSSMAG00000012988	-	91	42.966	ENSAMXG00000041663	-	88	41.556	Astyanax_mexicanus
ENSSMAG00000012988	-	56	40.602	ENSCING00000013747	-	95	40.602	Ciona_intestinalis
ENSSMAG00000012988	-	67	74.884	ENSCSEG00000018718	-	83	74.884	Cynoglossus_semilaevis
ENSSMAG00000012988	-	100	60.892	ENSCVAG00000007812	-	99	62.942	Cyprinodon_variegatus
ENSSMAG00000012988	-	91	44.030	ENSDARG00000062374	leng9	97	42.959	Danio_rerio
ENSSMAG00000012988	-	91	30.241	ENSEASG00005021529	LENG9	99	30.241	Equus_asinus_asinus
ENSSMAG00000012988	-	96	52.305	ENSELUG00000015268	-	95	52.941	Esox_lucius
ENSSMAG00000012988	-	87	54.965	ENSGMOG00000004924	leng9	97	54.965	Gadus_morhua
ENSSMAG00000012988	-	99	62.034	ENSGAFG00000013280	-	99	62.034	Gambusia_affinis
ENSSMAG00000012988	-	93	63.031	ENSGACG00000010726	-	100	69.011	Gasterosteus_aculeatus
ENSSMAG00000012988	-	62	39.634	ENSGAGG00000018912	LENG9	84	34.783	Gopherus_agassizii
ENSSMAG00000012988	-	99	67.123	ENSHBUG00000013531	-	99	66.267	Haplochromis_burtoni
ENSSMAG00000012988	-	83	77.073	ENSHCOG00000020683	-	93	77.073	Hippocampus_comes
ENSSMAG00000012988	-	93	41.199	ENSIPUG00000008163	leng9	92	41.121	Ictalurus_punctatus
ENSSMAG00000012988	-	90	67.630	ENSKMAG00000005354	-	100	67.630	Kryptolebias_marmoratus
ENSSMAG00000012988	-	100	68.847	ENSLBEG00000016902	-	100	68.330	Labrus_bergylta
ENSSMAG00000012988	-	99	71.282	ENSMAMG00000019552	-	99	70.769	Mastacembelus_armatus
ENSSMAG00000012988	-	99	67.470	ENSMZEG00005016430	-	99	66.609	Maylandia_zebra
ENSSMAG00000012988	-	78	72.609	ENSMMOG00000016554	-	94	72.609	Mola_mola
ENSSMAG00000012988	-	87	30.097	ENSMPUG00000018631	LENG9	89	30.544	Mustela_putorius_furo
ENSSMAG00000012988	-	91	63.480	ENSNBRG00000003056	-	97	63.480	Neolamprologus_brichardi
ENSSMAG00000012988	-	91	67.412	ENSONIG00000012767	-	98	72.692	Oreochromis_niloticus
ENSSMAG00000012988	-	99	59.272	ENSORLG00000011328	-	99	59.965	Oryzias_latipes
ENSSMAG00000012988	-	99	59.792	ENSORLG00020007474	-	99	59.965	Oryzias_latipes_hni
ENSSMAG00000012988	-	99	59.445	ENSORLG00015013245	-	99	59.619	Oryzias_latipes_hsok
ENSSMAG00000012988	-	99	57.913	ENSOMEG00000010765	-	99	58.261	Oryzias_melastigma
ENSSMAG00000012988	-	92	40.663	ENSPKIG00000012289	-	93	40.489	Paramormyrops_kingsleyae
ENSSMAG00000012988	-	77	58.542	ENSPMGG00000012138	-	100	55.902	Periophthalmus_magnuspinnatus
ENSSMAG00000012988	-	94	65.321	ENSPFOG00000009984	-	92	65.321	Poecilia_formosa
ENSSMAG00000012988	-	96	64.144	ENSPLAG00000012683	-	94	64.144	Poecilia_latipinna
ENSSMAG00000012988	-	94	65.138	ENSPMEG00000017453	-	92	65.138	Poecilia_mexicana
ENSSMAG00000012988	-	96	56.757	ENSPREG00000008082	-	100	56.757	Poecilia_reticulata
ENSSMAG00000012988	-	91	30.314	ENSPCAG00000005749	LENG9	97	30.314	Procavia_capensis
ENSSMAG00000012988	-	99	66.609	ENSPNYG00000001936	-	99	65.862	Pundamilia_nyererei
ENSSMAG00000012988	-	68	56.771	ENSPNAG00000003520	-	96	40.706	Pygocentrus_nattereri
ENSSMAG00000012988	-	99	39.174	ENSSFOG00015000816	-	99	38.308	Scleropages_formosus
ENSSMAG00000012988	-	96	74.857	ENSSDUG00000008877	-	96	75.000	Seriola_dumerili
ENSSMAG00000012988	-	97	73.346	ENSSLDG00000022376	-	95	72.407	Seriola_lalandi_dorsalis
ENSSMAG00000012988	-	51	51.456	ENSSPUG00000002762	LENG9	89	30.087	Sphenodon_punctatus
ENSSMAG00000012988	-	91	55.769	ENSSPAG00000016516	-	83	73.191	Stegastes_partitus
ENSSMAG00000012988	-	91	52.015	ENSTRUG00000016004	-	98	51.823	Takifugu_rubripes
ENSSMAG00000012988	-	91	58.302	ENSTNIG00000008093	-	91	75.243	Tetraodon_nigroviridis
ENSSMAG00000012988	-	78	76.471	ENSXCOG00000019442	-	99	76.471	Xiphophorus_couchianus
ENSSMAG00000012988	-	94	65.185	ENSXMAG00000023792	-	92	64.945	Xiphophorus_maculatus