EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSSMAG00000013221 (Gene tree)
Gene ID: -
Gene Symbol: gfm1
Alias: -
Full Name: G elongation factor%2C mitochondrial 1
Gene Type: protein_coding
Species: Scophthalmus_maximus
Status: putative
Strand: Minus strand
Length: 17193 bases
Position: chr3:11972865-11990057
Accession: ZDB-GENE-061013-79
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSMAP00000021619	GTP_EFTU	PF00009.27	3.4e-60	1	1
ENSSMAP00000021654	GTP_EFTU	PF00009.27	3.4e-60	1	1
ENSSMAP00000021619	GTP_EFTU_D2	PF03144.25	5.8e-16	1	1
ENSSMAP00000021654	GTP_EFTU_D2	PF03144.25	5.9e-16	1	1
ENSSMAP00000021619	EFG_IV	PF03764.18	3.8e-37	1	1
ENSSMAP00000021654	EFG_IV	PF03764.18	3.9e-37	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSMAT00000021909	-	2241	-	ENSSMAP00000021654	746 (aa)	-	-
ENSSMAT00000021874	-	5975	-	ENSSMAP00000021619	748 (aa)	-	A0A2U9B4R7

Gene Model

Click here to download ENSSMAG00000013221's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSMAG00000013221's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSSMAG00000013221	gfm1	86	44.051	ENSSMAG00000010773	gfm2	99	32.552
ENSSMAG00000013221	gfm1	51	37.662	ENSSMAG00000013101	guf1	61	37.662
ENSSMAG00000013221	gfm1	76	37.423	ENSSMAG00000003334	eef2b	74	37.423
ENSSMAG00000013221	gfm1	76	37.423	ENSSMAG00000011593	-	74	37.423

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSMAG00000013221	gfm1	98	77.415	ENSG00000168827	GFM1	100	91.667	Homo_sapiens
ENSSMAG00000013221	gfm1	93	88.252	ENSAPOG00000016489	gfm1	99	88.252	Acanthochromis_polyacanthus
ENSSMAG00000013221	gfm1	96	79.944	ENSAMEG00000013542	GFM1	99	77.763	Ailuropoda_melanoleuca
ENSSMAG00000013221	gfm1	97	84.669	ENSACIG00000014465	gfm1	94	84.669	Amphilophus_citrinellus
ENSSMAG00000013221	gfm1	100	89.973	ENSAOCG00000006023	gfm1	100	89.973	Amphiprion_ocellaris
ENSSMAG00000013221	gfm1	100	89.840	ENSAPEG00000024499	gfm1	100	89.840	Amphiprion_percula
ENSSMAG00000013221	gfm1	100	90.241	ENSATEG00000013789	gfm1	100	90.241	Anabas_testudineus
ENSSMAG00000013221	gfm1	97	79.696	ENSAPLG00000005022	GFM1	100	79.448	Anas_platyrhynchos
ENSSMAG00000013221	gfm1	98	79.026	ENSACAG00000006829	GFM1	100	79.026	Anolis_carolinensis
ENSSMAG00000013221	gfm1	100	76.431	ENSANAG00000035983	GFM1	100	76.431	Aotus_nancymaae
ENSSMAG00000013221	gfm1	100	89.305	ENSACLG00000016586	gfm1	100	89.305	Astatotilapia_calliptera
ENSSMAG00000013221	gfm1	100	83.957	ENSAMXG00000013435	gfm1	98	85.205	Astyanax_mexicanus
ENSSMAG00000013221	gfm1	96	79.387	ENSBTAG00000027795	GFM1	99	77.763	Bos_taurus
ENSSMAG00000013221	gfm1	93	57.514	WBGene00009246	gfm-1	92	57.514	Caenorhabditis_elegans
ENSSMAG00000013221	gfm1	97	78.926	ENSCJAG00000000363	GFM1	97	78.926	Callithrix_jacchus
ENSSMAG00000013221	gfm1	98	78.610	ENSCAFG00000009006	GFM1	100	79.586	Canis_familiaris
ENSSMAG00000013221	gfm1	100	77.467	ENSCAFG00020005878	GFM1	98	79.805	Canis_lupus_dingo
ENSSMAG00000013221	gfm1	96	79.526	ENSCHIG00000015220	GFM1	99	77.321	Capra_hircus
ENSSMAG00000013221	gfm1	100	76.760	ENSTSYG00000002013	GFM1	100	76.760	Carlito_syrichta
ENSSMAG00000013221	gfm1	98	68.606	ENSCAPG00000005699	GFM1	99	68.606	Cavia_aperea
ENSSMAG00000013221	gfm1	100	77.188	ENSCPOG00000001194	GFM1	100	77.454	Cavia_porcellus
ENSSMAG00000013221	gfm1	100	76.689	ENSCCAG00000025561	GFM1	100	76.689	Cebus_capucinus
ENSSMAG00000013221	gfm1	100	76.831	ENSCATG00000037622	GFM1	100	76.831	Cercocebus_atys
ENSSMAG00000013221	gfm1	97	78.237	ENSCLAG00000002503	GFM1	99	76.790	Chinchilla_lanigera
ENSSMAG00000013221	gfm1	100	77.097	ENSCSAG00000012162	GFM1	100	77.097	Chlorocebus_sabaeus
ENSSMAG00000013221	gfm1	100	68.470	ENSCHOG00000004867	GFM1	100	68.470	Choloepus_hoffmanni
ENSSMAG00000013221	gfm1	100	79.144	ENSCPBG00000018367	GFM1	99	79.892	Chrysemys_picta_bellii
ENSSMAG00000013221	gfm1	99	56.217	ENSCING00000011960	-	98	56.217	Ciona_intestinalis
ENSSMAG00000013221	gfm1	95	59.444	ENSCSAVG00000008514	-	99	59.444	Ciona_savignyi
ENSSMAG00000013221	gfm1	98	78.367	ENSCANG00000031714	GFM1	100	77.364	Colobus_angolensis_palliatus
ENSSMAG00000013221	gfm1	100	76.831	ENSCGRG00001022095	GFM1	100	77.630	Cricetulus_griseus_chok1gshd
ENSSMAG00000013221	gfm1	100	76.831	ENSCGRG00000012043	GFM1	100	77.630	Cricetulus_griseus_crigri
ENSSMAG00000013221	gfm1	97	82.711	ENSCSEG00000017088	gfm1	99	82.711	Cynoglossus_semilaevis
ENSSMAG00000013221	gfm1	100	89.840	ENSCVAG00000004126	gfm1	100	89.840	Cyprinodon_variegatus
ENSSMAG00000013221	gfm1	100	81.551	ENSDARG00000063624	gfm1	100	81.551	Danio_rerio
ENSSMAG00000013221	gfm1	55	77.506	ENSDNOG00000016385	-	100	77.506	Dasypus_novemcinctus
ENSSMAG00000013221	gfm1	100	74.735	ENSDORG00000014165	Gfm1	100	75.532	Dipodomys_ordii
ENSSMAG00000013221	gfm1	95	68.034	FBgn0263133	mEFG1	95	68.034	Drosophila_melanogaster
ENSSMAG00000013221	gfm1	96	71.290	ENSETEG00000019197	GFM1	95	71.290	Echinops_telfairi
ENSSMAG00000013221	gfm1	90	62.463	ENSEBUG00000012794	gfm1	100	62.463	Eptatretus_burgeri
ENSSMAG00000013221	gfm1	96	58.611	ENSEEUG00000000429	GFM1	99	58.611	Erinaceus_europaeus
ENSSMAG00000013221	gfm1	100	85.829	ENSELUG00000014728	gfm1	100	85.829	Esox_lucius
ENSSMAG00000013221	gfm1	97	78.650	ENSFCAG00000013291	GFM1	99	77.394	Felis_catus
ENSSMAG00000013221	gfm1	90	79.704	ENSFALG00000007619	GFM1	100	79.704	Ficedula_albicollis
ENSSMAG00000013221	gfm1	100	76.658	ENSFDAG00000016559	GFM1	100	76.923	Fukomys_damarensis
ENSSMAG00000013221	gfm1	100	88.904	ENSFHEG00000006091	gfm1	100	88.904	Fundulus_heteroclitus
ENSSMAG00000013221	gfm1	97	86.795	ENSGMOG00000010161	gfm1	100	86.795	Gadus_morhua
ENSSMAG00000013221	gfm1	97	78.897	ENSGALG00000009634	GFM1	98	79.363	Gallus_gallus
ENSSMAG00000013221	gfm1	100	88.503	ENSGAFG00000012527	gfm1	100	88.503	Gambusia_affinis
ENSSMAG00000013221	gfm1	100	89.453	ENSGACG00000009864	gfm1	100	89.453	Gasterosteus_aculeatus
ENSSMAG00000013221	gfm1	98	77.687	ENSGGOG00000003085	GFM1	100	76.698	Gorilla_gorilla
ENSSMAG00000013221	gfm1	100	89.439	ENSHBUG00000002120	gfm1	100	89.439	Haplochromis_burtoni
ENSSMAG00000013221	gfm1	97	77.961	ENSHGLG00000016855	GFM1	100	75.729	Heterocephalus_glaber_female
ENSSMAG00000013221	gfm1	97	77.961	ENSHGLG00100013049	GFM1	100	75.729	Heterocephalus_glaber_male
ENSSMAG00000013221	gfm1	100	88.102	ENSHCOG00000007638	gfm1	100	88.102	Hippocampus_comes
ENSSMAG00000013221	gfm1	100	83.957	ENSIPUG00000005873	gfm1	100	83.957	Ictalurus_punctatus
ENSSMAG00000013221	gfm1	97	77.824	ENSSTOG00000010150	GFM1	99	77.778	Ictidomys_tridecemlineatus
ENSSMAG00000013221	gfm1	100	75.632	ENSJJAG00000016447	Gfm1	100	75.963	Jaculus_jaculus
ENSSMAG00000013221	gfm1	100	85.695	ENSKMAG00000020768	gfm1	100	85.695	Kryptolebias_marmoratus
ENSSMAG00000013221	gfm1	94	89.444	ENSLBEG00000021315	gfm1	100	89.444	Labrus_bergylta
ENSSMAG00000013221	gfm1	100	79.144	ENSLACG00000012295	GFM1	98	81.189	Latimeria_chalumnae
ENSSMAG00000013221	gfm1	97	77.885	ENSLOCG00000003778	gfm1	99	77.885	Lepisosteus_oculatus
ENSSMAG00000013221	gfm1	99	75.067	ENSLAFG00000010945	GFM1	99	75.972	Loxodonta_africana
ENSSMAG00000013221	gfm1	100	76.964	ENSMFAG00000035731	GFM1	100	76.964	Macaca_fascicularis
ENSSMAG00000013221	gfm1	100	76.964	ENSMMUG00000004961	GFM1	100	76.964	Macaca_mulatta
ENSSMAG00000013221	gfm1	100	76.831	ENSMNEG00000033245	GFM1	100	76.831	Macaca_nemestrina
ENSSMAG00000013221	gfm1	97	77.241	ENSMLEG00000030908	GFM1	99	76.757	Mandrillus_leucophaeus
ENSSMAG00000013221	gfm1	100	89.840	ENSMAMG00000011760	gfm1	100	89.840	Mastacembelus_armatus
ENSSMAG00000013221	gfm1	100	89.439	ENSMZEG00005016639	gfm1	100	89.439	Maylandia_zebra
ENSSMAG00000013221	gfm1	97	79.144	ENSMGAG00000010641	GFM1	97	79.501	Meleagris_gallopavo
ENSSMAG00000013221	gfm1	99	78.331	ENSMAUG00000000611	Gfm1	99	78.331	Mesocricetus_auratus
ENSSMAG00000013221	gfm1	97	79.201	ENSMICG00000049086	GFM1	99	77.394	Microcebus_murinus
ENSSMAG00000013221	gfm1	99	78.162	ENSMOCG00000000465	Gfm1	100	78.162	Microtus_ochrogaster
ENSSMAG00000013221	gfm1	97	90.694	ENSMMOG00000012538	gfm1	98	90.694	Mola_mola
ENSSMAG00000013221	gfm1	97	78.897	ENSMODG00000015673	GFM1	98	78.897	Monodelphis_domestica
ENSSMAG00000013221	gfm1	97	87.895	ENSMALG00000012508	gfm1	97	87.895	Monopterus_albus
ENSSMAG00000013221	gfm1	100	76.831	MGP_CAROLIEiJ_G0025052	Gfm1	100	77.364	Mus_caroli
ENSSMAG00000013221	gfm1	100	76.565	ENSMUSG00000027774	Gfm1	100	77.097	Mus_musculus
ENSSMAG00000013221	gfm1	100	76.298	MGP_PahariEiJ_G0026495	Gfm1	100	76.831	Mus_pahari
ENSSMAG00000013221	gfm1	100	76.565	MGP_SPRETEiJ_G0025994	Gfm1	100	77.097	Mus_spretus
ENSSMAG00000013221	gfm1	99	77.674	ENSMPUG00000002859	GFM1	99	77.674	Mustela_putorius_furo
ENSSMAG00000013221	gfm1	99	77.527	ENSMLUG00000000452	GFM1	99	77.527	Myotis_lucifugus
ENSSMAG00000013221	gfm1	100	76.267	ENSNGAG00000012375	Gfm1	100	76.800	Nannospalax_galili
ENSSMAG00000013221	gfm1	97	90.180	ENSNBRG00000004631	gfm1	99	90.180	Neolamprologus_brichardi
ENSSMAG00000013221	gfm1	97	78.375	ENSNLEG00000004176	GFM1	100	76.565	Nomascus_leucogenys
ENSSMAG00000013221	gfm1	91	71.429	ENSMEUG00000007784	GFM1	99	71.429	Notamacropus_eugenii
ENSSMAG00000013221	gfm1	100	76.368	ENSOPRG00000009860	GFM1	100	76.368	Ochotona_princeps
ENSSMAG00000013221	gfm1	98	78.474	ENSODEG00000004316	GFM1	100	77.454	Octodon_degus
ENSSMAG00000013221	gfm1	100	89.439	ENSONIG00000003772	gfm1	100	89.439	Oreochromis_niloticus
ENSSMAG00000013221	gfm1	98	78.610	ENSOCUG00000013561	GFM1	99	77.793	Oryctolagus_cuniculus
ENSSMAG00000013221	gfm1	95	89.124	ENSORLG00000006487	gfm1	100	89.124	Oryzias_latipes
ENSSMAG00000013221	gfm1	100	88.102	ENSORLG00020003362	gfm1	100	88.102	Oryzias_latipes_hni
ENSSMAG00000013221	gfm1	100	88.235	ENSORLG00015005829	gfm1	100	88.235	Oryzias_latipes_hsok
ENSSMAG00000013221	gfm1	100	88.503	ENSOMEG00000012894	gfm1	100	88.503	Oryzias_melastigma
ENSSMAG00000013221	gfm1	99	77.128	ENSOGAG00000008298	GFM1	99	77.128	Otolemur_garnettii
ENSSMAG00000013221	gfm1	96	78.779	ENSOARG00000002409	GFM1	99	78.779	Ovis_aries
ENSSMAG00000013221	gfm1	98	77.687	ENSPPAG00000033881	GFM1	100	76.698	Pan_paniscus
ENSSMAG00000013221	gfm1	97	78.650	ENSPPRG00000009281	GFM1	99	77.394	Panthera_pardus
ENSSMAG00000013221	gfm1	97	78.512	ENSPTIG00000012416	GFM1	99	77.261	Panthera_tigris_altaica
ENSSMAG00000013221	gfm1	98	77.687	ENSPTRG00000015570	GFM1	100	76.698	Pan_troglodytes
ENSSMAG00000013221	gfm1	100	76.964	ENSPANG00000016512	GFM1	100	76.964	Papio_anubis
ENSSMAG00000013221	gfm1	100	82.620	ENSPKIG00000004876	gfm1	100	82.620	Paramormyrops_kingsleyae
ENSSMAG00000013221	gfm1	100	79.017	ENSPSIG00000012567	GFM1	99	79.759	Pelodiscus_sinensis
ENSSMAG00000013221	gfm1	97	88.260	ENSPMGG00000014068	gfm1	100	88.260	Periophthalmus_magnuspinnatus
ENSSMAG00000013221	gfm1	99	77.630	ENSPEMG00000008942	Gfm1	100	77.630	Peromyscus_maniculatus_bairdii
ENSSMAG00000013221	gfm1	86	75.814	ENSPCIG00000020195	GFM1	97	77.885	Phascolarctos_cinereus
ENSSMAG00000013221	gfm1	100	89.305	ENSPFOG00000011022	gfm1	100	89.305	Poecilia_formosa
ENSSMAG00000013221	gfm1	98	89.086	ENSPLAG00000019585	gfm1	100	88.624	Poecilia_latipinna
ENSSMAG00000013221	gfm1	100	89.171	ENSPMEG00000012376	gfm1	100	89.171	Poecilia_mexicana
ENSSMAG00000013221	gfm1	100	89.171	ENSPREG00000001332	gfm1	95	89.171	Poecilia_reticulata
ENSSMAG00000013221	gfm1	98	77.551	ENSPPYG00000014244	GFM1	100	76.565	Pongo_abelii
ENSSMAG00000013221	gfm1	94	77.809	ENSPCAG00000008934	GFM1	100	77.809	Procavia_capensis
ENSSMAG00000013221	gfm1	97	78.650	ENSPCOG00000022259	GFM1	100	76.658	Propithecus_coquereli
ENSSMAG00000013221	gfm1	98	77.568	ENSPVAG00000013605	GFM1	99	77.273	Pteropus_vampyrus
ENSSMAG00000013221	gfm1	100	89.171	ENSPNYG00000006037	gfm1	100	89.171	Pundamilia_nyererei
ENSSMAG00000013221	gfm1	100	83.690	ENSPNAG00000001237	gfm1	100	83.690	Pygocentrus_nattereri
ENSSMAG00000013221	gfm1	99	77.097	ENSRNOG00000012873	Gfm1	100	77.097	Rattus_norvegicus
ENSSMAG00000013221	gfm1	98	77.959	ENSRBIG00000031363	GFM1	100	76.964	Rhinopithecus_bieti
ENSSMAG00000013221	gfm1	98	78.095	ENSRROG00000031081	GFM1	100	77.097	Rhinopithecus_roxellana
ENSSMAG00000013221	gfm1	92	56.914	YLR069C	-	90	56.914	Saccharomyces_cerevisiae
ENSSMAG00000013221	gfm1	100	76.831	ENSSBOG00000023252	GFM1	100	76.831	Saimiri_boliviensis_boliviensis
ENSSMAG00000013221	gfm1	97	80.221	ENSSHAG00000017772	GFM1	97	80.000	Sarcophilus_harrisii
ENSSMAG00000013221	gfm1	100	82.243	ENSSFOG00015003117	gfm1	100	82.243	Scleropages_formosus
ENSSMAG00000013221	gfm1	100	92.380	ENSSDUG00000018665	gfm1	100	92.380	Seriola_dumerili
ENSSMAG00000013221	gfm1	100	92.513	ENSSLDG00000020606	gfm1	100	92.513	Seriola_lalandi_dorsalis
ENSSMAG00000013221	gfm1	99	76.455	ENSSPUG00000018686	GFM1	100	76.455	Sphenodon_punctatus
ENSSMAG00000013221	gfm1	100	91.310	ENSSPAG00000008800	gfm1	100	91.310	Stegastes_partitus
ENSSMAG00000013221	gfm1	96	78.830	ENSSSCG00000025651	GFM1	99	77.158	Sus_scrofa
ENSSMAG00000013221	gfm1	100	87.433	ENSTRUG00000009244	gfm1	100	87.433	Takifugu_rubripes
ENSSMAG00000013221	gfm1	100	89.439	ENSTNIG00000007729	gfm1	100	89.439	Tetraodon_nigroviridis
ENSSMAG00000013221	gfm1	90	70.519	ENSTBEG00000017404	GFM1	89	70.519	Tupaia_belangeri
ENSSMAG00000013221	gfm1	96	79.387	ENSTTRG00000001735	GFM1	99	77.510	Tursiops_truncatus
ENSSMAG00000013221	gfm1	97	78.926	ENSUAMG00000026381	GFM1	100	76.923	Ursus_americanus
ENSSMAG00000013221	gfm1	97	78.926	ENSUMAG00000011268	GFM1	100	76.923	Ursus_maritimus
ENSSMAG00000013221	gfm1	98	75.372	ENSVPAG00000009444	GFM1	99	74.967	Vicugna_pacos
ENSSMAG00000013221	gfm1	99	77.807	ENSVVUG00000020091	GFM1	100	79.438	Vulpes_vulpes
ENSSMAG00000013221	gfm1	100	79.122	ENSXETG00000032551	GFM1	100	79.122	Xenopus_tropicalis
ENSSMAG00000013221	gfm1	52	87.629	ENSXCOG00000012590	gfm1	93	85.608	Xiphophorus_couchianus
ENSSMAG00000013221	gfm1	100	88.904	ENSXMAG00000000261	gfm1	100	88.904	Xiphophorus_maculatus