EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSSMAG00000013235 (Gene tree)
Gene ID: -
Gene Symbol: cnot3a
Alias: fb73b06|fc17h07|wu:fb73b06|wu:fc17h07|zgc:92813
Full Name: CCR4-NOT transcription complex%2C subunit 3a
Gene Type: protein_coding
Species: Scophthalmus_maximus
Status: putative
Strand: Minus strand
Length: 12788 bases
Position: chr1:18534799-18547586
Accession: ZDB-GENE-040927-6
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSMAP00000021618	Not3	PF04065.15	1.7e-96	1	1
ENSSMAP00000021600	Not3	PF04065.15	1.8e-96	1	1
ENSSMAP00000021670	Not3	PF04065.15	1.3e-70	1	2
ENSSMAP00000021670	Not3	PF04065.15	1.3e-70	2	2
ENSSMAP00000021670	NOT2_3_5	PF04153.18	2.9e-38	1	1
ENSSMAP00000021618	NOT2_3_5	PF04153.18	3e-38	1	1
ENSSMAP00000021600	NOT2_3_5	PF04153.18	3e-38	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSMAT00000021855	-	7834	-	ENSSMAP00000021600	917 (aa)	-	A0A2U9AY65
ENSSMAT00000021873	-	7777	-	ENSSMAP00000021618	898 (aa)	-	-
ENSSMAT00000021926	-	7744	-	ENSSMAP00000021670	887 (aa)	-	-

Gene Model

Click here to download ENSSMAG00000013235's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSMAG00000013235's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSMAG00000013235	cnot3a	67	89.508	ENSG00000088038	CNOT3	100	94.330	Homo_sapiens
ENSSMAG00000013235	cnot3a	55	89.328	ENSAPOG00000015002	cnot3b	76	88.809	Acanthochromis_polyacanthus
ENSSMAG00000013235	cnot3a	58	88.256	ENSAPOG00000015499	CNOT3	92	88.256	Acanthochromis_polyacanthus
ENSSMAG00000013235	cnot3a	67	89.836	ENSAMEG00000004528	CNOT3	85	90.132	Ailuropoda_melanoleuca
ENSSMAG00000013235	cnot3a	61	91.518	ENSACIG00000003652	cnot3b	79	84.959	Amphilophus_citrinellus
ENSSMAG00000013235	cnot3a	100	90.632	ENSACIG00000006635	cnot3a	100	94.332	Amphilophus_citrinellus
ENSSMAG00000013235	cnot3a	99	89.341	ENSAOCG00000023769	cnot3a	99	88.681	Amphiprion_ocellaris
ENSSMAG00000013235	cnot3a	97	58.735	ENSAOCG00000018385	-	99	74.554	Amphiprion_ocellaris
ENSSMAG00000013235	cnot3a	97	62.870	ENSAPEG00000002640	cnot3b	80	84.746	Amphiprion_percula
ENSSMAG00000013235	cnot3a	100	91.612	ENSAPEG00000006624	cnot3a	100	90.850	Amphiprion_percula
ENSSMAG00000013235	cnot3a	100	91.721	ENSATEG00000022737	cnot3a	100	91.503	Anabas_testudineus
ENSSMAG00000013235	cnot3a	69	89.610	ENSACAG00000016085	CNOT3	88	90.132	Anolis_carolinensis
ENSSMAG00000013235	cnot3a	67	89.508	ENSANAG00000025756	CNOT3	84	89.803	Aotus_nancymaae
ENSSMAG00000013235	cnot3a	100	92.702	ENSACLG00000021136	cnot3a	100	92.375	Astatotilapia_calliptera
ENSSMAG00000013235	cnot3a	74	90.811	ENSAMXG00000009447	cnot3b	70	90.811	Astyanax_mexicanus
ENSSMAG00000013235	cnot3a	100	73.936	ENSAMXG00000012359	cnot3a	100	74.705	Astyanax_mexicanus
ENSSMAG00000013235	cnot3a	68	88.424	ENSBTAG00000014900	CNOT3	97	89.803	Bos_taurus
ENSSMAG00000013235	cnot3a	52	54.696	WBGene00003826	ntl-3	91	54.696	Caenorhabditis_elegans
ENSSMAG00000013235	cnot3a	67	89.508	ENSCJAG00000001094	CNOT3	84	89.803	Callithrix_jacchus
ENSSMAG00000013235	cnot3a	67	89.508	ENSCAFG00000002699	CNOT3	84	89.803	Canis_familiaris
ENSSMAG00000013235	cnot3a	67	89.508	ENSCAFG00020018359	CNOT3	84	89.803	Canis_lupus_dingo
ENSSMAG00000013235	cnot3a	63	86.452	ENSCHIG00000015302	CNOT3	77	87.789	Capra_hircus
ENSSMAG00000013235	cnot3a	67	89.508	ENSTSYG00000008058	CNOT3	85	89.803	Carlito_syrichta
ENSSMAG00000013235	cnot3a	68	88.424	ENSCAPG00000009533	CNOT3	85	89.803	Cavia_aperea
ENSSMAG00000013235	cnot3a	68	88.424	ENSCPOG00000020741	CNOT3	85	89.803	Cavia_porcellus
ENSSMAG00000013235	cnot3a	67	89.508	ENSCCAG00000036290	CNOT3	84	89.803	Cebus_capucinus
ENSSMAG00000013235	cnot3a	67	89.508	ENSCATG00000030324	CNOT3	85	89.803	Cercocebus_atys
ENSSMAG00000013235	cnot3a	74	88.424	ENSCLAG00000003302	CNOT3	100	85.366	Chinchilla_lanigera
ENSSMAG00000013235	cnot3a	67	89.508	ENSCSAG00000001900	CNOT3	85	89.803	Chlorocebus_sabaeus
ENSSMAG00000013235	cnot3a	69	89.286	ENSCPBG00000011655	CNOT3	89	90.132	Chrysemys_picta_bellii
ENSSMAG00000013235	cnot3a	77	57.651	ENSCING00000000293	-	72	67.213	Ciona_intestinalis
ENSSMAG00000013235	cnot3a	68	88.103	ENSCANG00000013408	CNOT3	85	89.803	Colobus_angolensis_palliatus
ENSSMAG00000013235	cnot3a	67	89.836	ENSCGRG00001000855	Cnot3	85	90.132	Cricetulus_griseus_chok1gshd
ENSSMAG00000013235	cnot3a	100	91.604	ENSCSEG00000003574	cnot3a	100	90.958	Cynoglossus_semilaevis
ENSSMAG00000013235	cnot3a	100	57.540	ENSCSEG00000016892	cnot3b	70	80.592	Cynoglossus_semilaevis
ENSSMAG00000013235	cnot3a	100	85.294	ENSCVAG00000008168	cnot3a	100	85.621	Cyprinodon_variegatus
ENSSMAG00000013235	cnot3a	100	75.376	ENSDARG00000007135	cnot3a	100	74.784	Danio_rerio
ENSSMAG00000013235	cnot3a	58	63.178	ENSDARG00000019842	cnot3b	51	64.240	Danio_rerio
ENSSMAG00000013235	cnot3a	67	89.508	ENSDNOG00000045972	CNOT3	85	89.803	Dasypus_novemcinctus
ENSSMAG00000013235	cnot3a	67	89.508	ENSDORG00000008021	Cnot3	100	80.460	Dipodomys_ordii
ENSSMAG00000013235	cnot3a	50	66.082	FBgn0033029	Not3	50	67.331	Drosophila_melanogaster
ENSSMAG00000013235	cnot3a	52	100.000	ENSETEG00000006305	CNOT3	63	100.000	Echinops_telfairi
ENSSMAG00000013235	cnot3a	71	71.753	ENSEBUG00000010437	cnot3a	71	69.421	Eptatretus_burgeri
ENSSMAG00000013235	cnot3a	67	89.508	ENSEASG00005021591	CNOT3	84	89.803	Equus_asinus_asinus
ENSSMAG00000013235	cnot3a	67	89.508	ENSECAG00000023181	CNOT3	84	89.803	Equus_caballus
ENSSMAG00000013235	cnot3a	100	67.650	ENSELUG00000000953	cnot3b	51	63.958	Esox_lucius
ENSSMAG00000013235	cnot3a	100	81.038	ENSELUG00000014743	cnot3a	57	79.661	Esox_lucius
ENSSMAG00000013235	cnot3a	68	88.424	ENSFCAG00000014042	CNOT3	85	89.803	Felis_catus
ENSSMAG00000013235	cnot3a	100	84.222	ENSFHEG00000023166	cnot3a	96	97.863	Fundulus_heteroclitus
ENSSMAG00000013235	cnot3a	94	79.425	ENSGMOG00000005365	cnot3a	98	79.770	Gadus_morhua
ENSSMAG00000013235	cnot3a	100	85.745	ENSGAFG00000013094	cnot3a	100	85.963	Gambusia_affinis
ENSSMAG00000013235	cnot3a	94	82.258	ENSGACG00000011489	cnot3a	98	83.871	Gasterosteus_aculeatus
ENSSMAG00000013235	cnot3a	63	88.235	ENSGAGG00000012677	CNOT3	87	87.558	Gopherus_agassizii
ENSSMAG00000013235	cnot3a	67	89.508	ENSGGOG00000012996	CNOT3	84	89.803	Gorilla_gorilla
ENSSMAG00000013235	cnot3a	99	59.023	ENSHBUG00000019699	cnot3b	54	57.937	Haplochromis_burtoni
ENSSMAG00000013235	cnot3a	100	92.810	ENSHBUG00000005275	cnot3a	100	92.484	Haplochromis_burtoni
ENSSMAG00000013235	cnot3a	68	88.424	ENSHGLG00000008821	CNOT3	100	80.460	Heterocephalus_glaber_female
ENSSMAG00000013235	cnot3a	61	83.908	ENSHGLG00100006181	CNOT3	100	80.460	Heterocephalus_glaber_male
ENSSMAG00000013235	cnot3a	100	84.257	ENSHCOG00000020968	cnot3a	100	85.477	Hippocampus_comes
ENSSMAG00000013235	cnot3a	100	66.275	ENSIPUG00000000167	cnot3	61	95.726	Ictalurus_punctatus
ENSSMAG00000013235	cnot3a	67	89.508	ENSSTOG00000028248	CNOT3	85	89.803	Ictidomys_tridecemlineatus
ENSSMAG00000013235	cnot3a	67	89.836	ENSJJAG00000014594	Cnot3	100	80.460	Jaculus_jaculus
ENSSMAG00000013235	cnot3a	100	90.632	ENSKMAG00000004863	cnot3a	100	90.087	Kryptolebias_marmoratus
ENSSMAG00000013235	cnot3a	97	65.119	ENSLBEG00000018278	cnot3b	72	89.145	Labrus_bergylta
ENSSMAG00000013235	cnot3a	83	97.738	ENSLBEG00000017296	cnot3a	68	97.738	Labrus_bergylta
ENSSMAG00000013235	cnot3a	68	86.495	ENSLACG00000009742	CNOT3	88	88.158	Latimeria_chalumnae
ENSSMAG00000013235	cnot3a	52	95.210	ENSLOCG00000000005	cnot3b	79	92.857	Lepisosteus_oculatus
ENSSMAG00000013235	cnot3a	67	88.889	ENSLAFG00000022133	CNOT3	84	89.180	Loxodonta_africana
ENSSMAG00000013235	cnot3a	67	89.508	ENSMFAG00000040073	CNOT3	85	89.803	Macaca_fascicularis
ENSSMAG00000013235	cnot3a	61	92.437	ENSMMUG00000009698	CNOT3	100	95.098	Macaca_mulatta
ENSSMAG00000013235	cnot3a	67	89.508	ENSMNEG00000036750	CNOT3	85	89.803	Macaca_nemestrina
ENSSMAG00000013235	cnot3a	67	89.508	ENSMLEG00000036579	CNOT3	84	89.803	Mandrillus_leucophaeus
ENSSMAG00000013235	cnot3a	60	92.628	ENSMAMG00000019397	cnot3a	100	91.176	Mastacembelus_armatus
ENSSMAG00000013235	cnot3a	100	92.702	ENSMZEG00005016304	cnot3a	100	92.375	Maylandia_zebra
ENSSMAG00000013235	cnot3a	67	89.836	ENSMAUG00000014996	Cnot3	85	90.132	Mesocricetus_auratus
ENSSMAG00000013235	cnot3a	67	89.508	ENSMICG00000002370	CNOT3	84	89.803	Microcebus_murinus
ENSSMAG00000013235	cnot3a	61	89.316	ENSMMOG00000013086	cnot3b	99	85.542	Mola_mola
ENSSMAG00000013235	cnot3a	100	88.901	ENSMMOG00000016446	cnot3a	100	90.098	Mola_mola
ENSSMAG00000013235	cnot3a	60	89.508	ENSMODG00000004066	CNOT3	73	89.803	Monodelphis_domestica
ENSSMAG00000013235	cnot3a	100	89.651	ENSMALG00000009204	cnot3a	100	89.978	Monopterus_albus
ENSSMAG00000013235	cnot3a	58	86.486	ENSMALG00000004936	cnot3b	77	86.195	Monopterus_albus
ENSSMAG00000013235	cnot3a	67	89.836	MGP_CAROLIEiJ_G0029095	Cnot3	100	98.000	Mus_caroli
ENSSMAG00000013235	cnot3a	67	89.836	ENSMUSG00000035632	Cnot3	100	98.000	Mus_musculus
ENSSMAG00000013235	cnot3a	67	89.836	MGP_PahariEiJ_G0020964	Cnot3	100	98.000	Mus_pahari
ENSSMAG00000013235	cnot3a	67	89.836	MGP_SPRETEiJ_G0030148	Cnot3	100	98.000	Mus_spretus
ENSSMAG00000013235	cnot3a	68	88.424	ENSMPUG00000010352	CNOT3	85	89.803	Mustela_putorius_furo
ENSSMAG00000013235	cnot3a	67	89.508	ENSNGAG00000013266	Cnot3	72	89.803	Nannospalax_galili
ENSSMAG00000013235	cnot3a	78	86.179	ENSNBRG00000003336	cnot3b	92	88.938	Neolamprologus_brichardi
ENSSMAG00000013235	cnot3a	100	92.770	ENSNBRG00000002401	cnot3a	100	92.436	Neolamprologus_brichardi
ENSSMAG00000013235	cnot3a	67	89.508	ENSNLEG00000006272	CNOT3	84	89.803	Nomascus_leucogenys
ENSSMAG00000013235	cnot3a	67	89.508	ENSODEG00000000705	CNOT3	100	88.608	Octodon_degus
ENSSMAG00000013235	cnot3a	100	92.484	ENSONIG00000006568	cnot3a	100	92.266	Oreochromis_niloticus
ENSSMAG00000013235	cnot3a	67	89.508	ENSOCUG00000007691	CNOT3	85	89.803	Oryctolagus_cuniculus
ENSSMAG00000013235	cnot3a	100	89.760	ENSORLG00000011174	cnot3a	100	88.671	Oryzias_latipes
ENSSMAG00000013235	cnot3a	100	89.216	ENSORLG00020008009	cnot3a	100	88.780	Oryzias_latipes_hni
ENSSMAG00000013235	cnot3a	100	89.216	ENSORLG00015013729	cnot3a	100	88.671	Oryzias_latipes_hsok
ENSSMAG00000013235	cnot3a	100	89.760	ENSOMEG00000010309	cnot3a	98	96.471	Oryzias_melastigma
ENSSMAG00000013235	cnot3a	67	89.508	ENSOGAG00000006945	CNOT3	84	89.803	Otolemur_garnettii
ENSSMAG00000013235	cnot3a	50	91.979	ENSOARG00000002981	CNOT3	66	91.979	Ovis_aries
ENSSMAG00000013235	cnot3a	67	89.508	ENSPPAG00000002748	CNOT3	84	89.803	Pan_paniscus
ENSSMAG00000013235	cnot3a	68	88.424	ENSPPRG00000011705	CNOT3	85	89.803	Panthera_pardus
ENSSMAG00000013235	cnot3a	61	89.933	ENSPTIG00000008781	CNOT3	96	89.933	Panthera_tigris_altaica
ENSSMAG00000013235	cnot3a	67	89.508	ENSPTRG00000046717	-	84	89.803	Pan_troglodytes
ENSSMAG00000013235	cnot3a	67	89.508	ENSPTRG00000011444	CNOT3	84	89.803	Pan_troglodytes
ENSSMAG00000013235	cnot3a	67	89.508	ENSPANG00000009375	CNOT3	85	89.803	Papio_anubis
ENSSMAG00000013235	cnot3a	61	94.017	ENSPKIG00000015967	-	100	87.891	Paramormyrops_kingsleyae
ENSSMAG00000013235	cnot3a	100	65.933	ENSPKIG00000011733	CNOT3	75	58.614	Paramormyrops_kingsleyae
ENSSMAG00000013235	cnot3a	63	90.157	ENSPEMG00000024185	Cnot3	85	90.132	Peromyscus_maniculatus_bairdii
ENSSMAG00000013235	cnot3a	68	89.180	ENSPCIG00000023018	CNOT3	90	89.474	Phascolarctos_cinereus
ENSSMAG00000013235	cnot3a	100	86.275	ENSPFOG00000008693	cnot3a	92	94.702	Poecilia_formosa
ENSSMAG00000013235	cnot3a	100	86.057	ENSPLAG00000013324	cnot3a	100	86.181	Poecilia_latipinna
ENSSMAG00000013235	cnot3a	100	87.255	ENSPMEG00000017718	cnot3a	100	86.601	Poecilia_mexicana
ENSSMAG00000013235	cnot3a	100	85.559	ENSPREG00000007592	cnot3a	100	93.522	Poecilia_reticulata
ENSSMAG00000013235	cnot3a	67	89.180	ENSPPYG00000010372	CNOT3	84	89.474	Pongo_abelii
ENSSMAG00000013235	cnot3a	52	91.525	ENSPCAG00000011999	CNOT3	56	91.525	Procavia_capensis
ENSSMAG00000013235	cnot3a	67	89.508	ENSPCOG00000017673	CNOT3	84	89.803	Propithecus_coquereli
ENSSMAG00000013235	cnot3a	68	87.781	ENSPVAG00000015564	CNOT3	70	89.145	Pteropus_vampyrus
ENSSMAG00000013235	cnot3a	100	92.919	ENSPNYG00000002282	cnot3a	100	92.593	Pundamilia_nyererei
ENSSMAG00000013235	cnot3a	100	76.201	ENSPNAG00000017679	cnot3a	64	92.245	Pygocentrus_nattereri
ENSSMAG00000013235	cnot3a	67	89.836	ENSRNOG00000053234	Cnot3	85	90.132	Rattus_norvegicus
ENSSMAG00000013235	cnot3a	67	89.508	ENSRBIG00000031025	CNOT3	85	89.803	Rhinopithecus_bieti
ENSSMAG00000013235	cnot3a	67	89.508	ENSRROG00000003872	CNOT3	85	89.803	Rhinopithecus_roxellana
ENSSMAG00000013235	cnot3a	74	89.508	ENSSBOG00000030268	CNOT3	84	89.803	Saimiri_boliviensis_boliviensis
ENSSMAG00000013235	cnot3a	100	69.664	ENSSFOG00015019203	-	53	63.105	Scleropages_formosus
ENSSMAG00000013235	cnot3a	100	69.173	ENSSFOG00015000248	cnot3	57	59.232	Scleropages_formosus
ENSSMAG00000013235	cnot3a	100	92.935	ENSSDUG00000008181	cnot3a	100	94.737	Seriola_dumerili
ENSSMAG00000013235	cnot3a	97	95.260	ENSSLDG00000014733	cnot3a	99	95.372	Seriola_lalandi_dorsalis
ENSSMAG00000013235	cnot3a	68	89.286	ENSSPUG00000008510	CNOT3	88	89.803	Sphenodon_punctatus
ENSSMAG00000013235	cnot3a	97	94.018	ENSSPAG00000003858	cnot3a	98	93.228	Stegastes_partitus
ENSSMAG00000013235	cnot3a	100	66.945	ENSSPAG00000001429	cnot3b	54	63.405	Stegastes_partitus
ENSSMAG00000013235	cnot3a	67	89.508	ENSSSCG00000003264	CNOT3	84	89.803	Sus_scrofa
ENSSMAG00000013235	cnot3a	100	89.107	ENSTRUG00000015732	cnot3a	100	89.760	Takifugu_rubripes
ENSSMAG00000013235	cnot3a	67	89.836	ENSUAMG00000005234	CNOT3	85	90.132	Ursus_americanus
ENSSMAG00000013235	cnot3a	56	92.857	ENSUMAG00000010934	CNOT3	89	92.857	Ursus_maritimus
ENSSMAG00000013235	cnot3a	67	89.508	ENSVVUG00000008239	CNOT3	83	89.803	Vulpes_vulpes
ENSSMAG00000013235	cnot3a	69	86.581	ENSXETG00000003166	cnot3	88	87.702	Xenopus_tropicalis
ENSSMAG00000013235	cnot3a	97	82.770	ENSXCOG00000019460	cnot3a	97	97.436	Xiphophorus_couchianus
ENSSMAG00000013235	cnot3a	100	85.730	ENSXMAG00000012273	cnot3a	100	84.875	Xiphophorus_maculatus