EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSSMAG00000013291 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Scophthalmus_maximus
Status: putative
Strand: Plus strand
Length: 10752 bases
Position: chr2:9985223-9995974
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSMAP00000021751	zf-C2H2	PF00096.26	7.9e-49	1	5
ENSSMAP00000021751	zf-C2H2	PF00096.26	7.9e-49	2	5
ENSSMAP00000021751	zf-C2H2	PF00096.26	7.9e-49	3	5
ENSSMAP00000021751	zf-C2H2	PF00096.26	7.9e-49	4	5
ENSSMAP00000021751	zf-C2H2	PF00096.26	7.9e-49	5	5
ENSSMAP00000021769	zf-C2H2	PF00096.26	5.9e-47	1	5
ENSSMAP00000021769	zf-C2H2	PF00096.26	5.9e-47	2	5
ENSSMAP00000021769	zf-C2H2	PF00096.26	5.9e-47	3	5
ENSSMAP00000021769	zf-C2H2	PF00096.26	5.9e-47	4	5
ENSSMAP00000021769	zf-C2H2	PF00096.26	5.9e-47	5	5
ENSSMAP00000021722	zf-C2H2	PF00096.26	6.8e-29	1	2
ENSSMAP00000021722	zf-C2H2	PF00096.26	6.8e-29	2	2
ENSSMAP00000021787	zf-C2H2	PF00096.26	1.7e-23	1	5
ENSSMAP00000021787	zf-C2H2	PF00096.26	1.7e-23	2	5
ENSSMAP00000021787	zf-C2H2	PF00096.26	1.7e-23	3	5
ENSSMAP00000021787	zf-C2H2	PF00096.26	1.7e-23	4	5
ENSSMAP00000021787	zf-C2H2	PF00096.26	1.7e-23	5	5
ENSSMAP00000021787	zf-met	PF12874.7	0.00032	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSMAT00000021977	-	2178	-	ENSSMAP00000021722	725 (aa)	-	-
ENSSMAT00000022023	-	7077	-	ENSSMAP00000021769	993 (aa)	-	-
ENSSMAT00000022043	-	633	-	ENSSMAP00000021787	210 (aa)	-	-
ENSSMAT00000022006	-	7173	-	ENSSMAP00000021751	1025 (aa)	-	A0A2U9B204

Gene Model

Click here to download ENSSMAG00000013291's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSMAG00000013291's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSSMAG00000013291	-	91	35.211	ENSSMAG00000019364	snai2	55	38.158
ENSSMAG00000013291	-	94	43.684	ENSSMAG00000013828	-	60	44.444
ENSSMAG00000013291	-	91	43.956	ENSSMAG00000017501	-	52	41.905
ENSSMAG00000013291	-	96	40.506	ENSSMAG00000013676	-	84	40.506
ENSSMAG00000013291	-	94	41.579	ENSSMAG00000007396	-	81	41.579
ENSSMAG00000013291	-	94	43.353	ENSSMAG00000021271	-	73	37.069
ENSSMAG00000013291	-	91	45.902	ENSSMAG00000019949	-	75	49.231
ENSSMAG00000013291	-	98	44.118	ENSSMAG00000009609	-	91	52.381
ENSSMAG00000013291	-	93	42.667	ENSSMAG00000014864	-	90	44.706
ENSSMAG00000013291	-	100	42.529	ENSSMAG00000007561	znf236	77	37.879
ENSSMAG00000013291	-	91	46.903	ENSSMAG00000006902	-	55	46.903
ENSSMAG00000013291	-	92	40.506	ENSSMAG00000002598	-	55	42.857
ENSSMAG00000013291	-	91	43.564	ENSSMAG00000009685	-	97	44.340
ENSSMAG00000013291	-	94	43.147	ENSSMAG00000015041	si:dkey-7i4.5	90	41.975
ENSSMAG00000013291	-	94	41.333	ENSSMAG00000000056	-	99	35.200
ENSSMAG00000013291	-	91	44.624	ENSSMAG00000015282	-	75	44.624
ENSSMAG00000013291	-	92	36.022	ENSSMAG00000008907	zbtb41	66	38.356
ENSSMAG00000013291	-	94	51.389	ENSSMAG00000005076	-	98	51.389
ENSSMAG00000013291	-	92	34.591	ENSSMAG00000007380	znf710b	53	35.000
ENSSMAG00000013291	-	92	40.678	ENSSMAG00000014720	e4f1	71	40.000
ENSSMAG00000013291	-	99	35.616	ENSSMAG00000012378	znf646	98	37.179
ENSSMAG00000013291	-	91	35.043	ENSSMAG00000005122	-	86	33.333
ENSSMAG00000013291	-	96	49.462	ENSSMAG00000009679	-	89	49.462
ENSSMAG00000013291	-	86	38.583	ENSSMAG00000020844	patz1	56	39.130
ENSSMAG00000013291	-	92	40.789	ENSSMAG00000004429	-	87	40.146
ENSSMAG00000013291	-	99	47.475	ENSSMAG00000015347	-	92	40.000
ENSSMAG00000013291	-	94	39.691	ENSSMAG00000015356	-	85	43.069
ENSSMAG00000013291	-	91	40.351	ENSSMAG00000000183	-	71	42.857
ENSSMAG00000013291	-	91	40.854	ENSSMAG00000015181	gfi1b	92	40.741
ENSSMAG00000013291	-	93	49.587	ENSSMAG00000006197	-	93	47.328
ENSSMAG00000013291	-	99	37.949	ENSSMAG00000015849	znf319b	98	35.567
ENSSMAG00000013291	-	98	46.023	ENSSMAG00000021251	-	91	54.902
ENSSMAG00000013291	-	91	35.897	ENSSMAG00000000404	-	89	36.788
ENSSMAG00000013291	-	91	42.941	ENSSMAG00000006825	-	96	39.252
ENSSMAG00000013291	-	94	41.414	ENSSMAG00000018844	prdm5	78	37.931
ENSSMAG00000013291	-	92	42.286	ENSSMAG00000019980	-	87	35.135
ENSSMAG00000013291	-	99	46.032	ENSSMAG00000002031	-	98	37.745
ENSSMAG00000013291	-	92	37.241	ENSSMAG00000001305	zgc:66448	61	33.628
ENSSMAG00000013291	-	96	30.114	ENSSMAG00000001359	-	88	38.824
ENSSMAG00000013291	-	96	45.745	ENSSMAG00000013663	-	90	53.333
ENSSMAG00000013291	-	91	32.576	ENSSMAG00000019207	scrt1b	78	34.328
ENSSMAG00000013291	-	91	36.232	ENSSMAG00000008834	-	66	40.541
ENSSMAG00000013291	-	92	33.871	ENSSMAG00000001190	PRDM15	61	30.769
ENSSMAG00000013291	-	97	36.986	ENSSMAG00000014597	-	61	40.404
ENSSMAG00000013291	-	94	46.667	ENSSMAG00000003594	-	85	46.667
ENSSMAG00000013291	-	92	37.949	ENSSMAG00000002391	ZNF319	87	41.860
ENSSMAG00000013291	-	92	51.111	ENSSMAG00000009115	-	96	48.611
ENSSMAG00000013291	-	91	43.407	ENSSMAG00000017045	-	66	41.850
ENSSMAG00000013291	-	82	43.902	ENSSMAG00000003204	zgc:171929	73	43.902
ENSSMAG00000013291	-	92	42.268	ENSSMAG00000005081	-	98	37.079
ENSSMAG00000013291	-	92	45.918	ENSSMAG00000014844	-	81	45.918
ENSSMAG00000013291	-	90	48.571	ENSSMAG00000004259	-	50	46.296
ENSSMAG00000013291	-	92	37.681	ENSSMAG00000004252	-	91	39.130
ENSSMAG00000013291	-	98	41.176	ENSSMAG00000008308	-	77	36.364
ENSSMAG00000013291	-	91	43.860	ENSSMAG00000006155	-	51	43.590

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSMAG00000013291	-	91	51.351	ENSAPOG00000018429	-	51	48.148	Acanthochromis_polyacanthus
ENSSMAG00000013291	-	90	32.836	ENSAPOG00000012437	-	97	35.333	Acanthochromis_polyacanthus
ENSSMAG00000013291	-	92	43.066	ENSAPOG00000019138	-	60	43.066	Acanthochromis_polyacanthus
ENSSMAG00000013291	-	94	41.667	ENSAPOG00000008319	-	74	36.585	Acanthochromis_polyacanthus
ENSSMAG00000013291	-	91	36.126	ENSAPOG00000022111	-	85	34.286	Acanthochromis_polyacanthus
ENSSMAG00000013291	-	98	38.500	ENSACIG00000017892	-	87	39.891	Amphilophus_citrinellus
ENSSMAG00000013291	-	93	46.377	ENSACIG00000007464	-	76	44.681	Amphilophus_citrinellus
ENSSMAG00000013291	-	91	33.846	ENSACIG00000002944	-	83	38.095	Amphilophus_citrinellus
ENSSMAG00000013291	-	91	48.611	ENSACIG00000004641	-	58	48.101	Amphilophus_citrinellus
ENSSMAG00000013291	-	89	46.875	ENSACIG00000006826	-	74	38.333	Amphilophus_citrinellus
ENSSMAG00000013291	-	94	41.667	ENSAOCG00000014769	-	90	36.585	Amphiprion_ocellaris
ENSSMAG00000013291	-	94	41.667	ENSAOCG00000015944	-	82	36.585	Amphiprion_ocellaris
ENSSMAG00000013291	-	93	37.589	ENSAOCG00000001325	-	86	37.748	Amphiprion_ocellaris
ENSSMAG00000013291	-	98	40.426	ENSAOCG00000016897	-	75	49.057	Amphiprion_ocellaris
ENSSMAG00000013291	-	87	36.220	ENSAOCG00000006744	-	87	36.220	Amphiprion_ocellaris
ENSSMAG00000013291	-	55	35.948	ENSAPEG00000015714	-	89	35.948	Amphiprion_percula
ENSSMAG00000013291	-	97	40.217	ENSAPEG00000010013	-	83	39.286	Amphiprion_percula
ENSSMAG00000013291	-	92	40.000	ENSAPEG00000001556	-	75	35.821	Amphiprion_percula
ENSSMAG00000013291	-	98	44.792	ENSATEG00000018931	-	97	42.105	Anabas_testudineus
ENSSMAG00000013291	-	91	50.000	ENSACLG00000011658	-	80	50.000	Astatotilapia_calliptera
ENSSMAG00000013291	-	97	40.940	ENSACLG00000005694	-	61	41.611	Astatotilapia_calliptera
ENSSMAG00000013291	-	98	39.024	ENSAMXG00000029518	-	58	41.000	Astyanax_mexicanus
ENSSMAG00000013291	-	90	39.785	ENSCING00000002128	zf(c2h2)-35	76	37.838	Ciona_intestinalis
ENSSMAG00000013291	-	92	44.898	ENSCSEG00000010264	-	91	42.254	Cynoglossus_semilaevis
ENSSMAG00000013291	-	92	47.368	ENSCSEG00000010453	-	79	45.342	Cynoglossus_semilaevis
ENSSMAG00000013291	-	93	52.326	ENSCSEG00000015593	-	82	52.326	Cynoglossus_semilaevis
ENSSMAG00000013291	-	90	45.223	ENSCVAG00000006653	-	72	42.529	Cyprinodon_variegatus
ENSSMAG00000013291	-	95	47.059	ENSCVAG00000012682	-	90	46.939	Cyprinodon_variegatus
ENSSMAG00000013291	-	92	46.457	ENSCVAG00000006484	-	60	44.275	Cyprinodon_variegatus
ENSSMAG00000013291	-	91	42.529	ENSCVAG00000020141	-	72	42.529	Cyprinodon_variegatus
ENSSMAG00000013291	-	94	41.135	ENSCVAG00000003250	-	96	40.541	Cyprinodon_variegatus
ENSSMAG00000013291	-	92	45.098	ENSCVAG00000015616	-	79	51.724	Cyprinodon_variegatus
ENSSMAG00000013291	-	99	40.556	ENSEBUG00000007931	-	72	40.556	Eptatretus_burgeri
ENSSMAG00000013291	-	92	38.596	ENSEBUG00000002290	-	53	39.286	Eptatretus_burgeri
ENSSMAG00000013291	-	92	40.123	ENSELUG00000012088	-	53	40.123	Esox_lucius
ENSSMAG00000013291	-	97	43.038	ENSELUG00000001909	-	89	43.038	Esox_lucius
ENSSMAG00000013291	-	97	46.809	ENSELUG00000024007	-	82	46.535	Esox_lucius
ENSSMAG00000013291	-	92	46.809	ENSFHEG00000023184	-	75	42.051	Fundulus_heteroclitus
ENSSMAG00000013291	-	90	32.927	ENSGAFG00000012545	-	60	30.769	Gambusia_affinis
ENSSMAG00000013291	-	99	45.133	ENSGAFG00000008204	-	67	45.133	Gambusia_affinis
ENSSMAG00000013291	-	88	45.000	ENSGAFG00000007528	-	53	43.636	Gambusia_affinis
ENSSMAG00000013291	-	92	45.669	ENSGAFG00000001879	-	78	45.669	Gambusia_affinis
ENSSMAG00000013291	-	96	38.065	ENSHBUG00000006656	-	64	38.065	Haplochromis_burtoni
ENSSMAG00000013291	-	92	40.000	ENSHCOG00000008227	-	52	36.181	Hippocampus_comes
ENSSMAG00000013291	-	91	44.633	ENSHCOG00000008550	-	61	45.263	Hippocampus_comes
ENSSMAG00000013291	-	91	46.154	ENSHCOG00000019389	-	62	47.328	Hippocampus_comes
ENSSMAG00000013291	-	93	41.406	ENSHCOG00000008213	-	58	43.333	Hippocampus_comes
ENSSMAG00000013291	-	91	44.633	ENSHCOG00000001873	-	61	45.263	Hippocampus_comes
ENSSMAG00000013291	-	92	48.634	ENSHCOG00000015497	-	83	56.410	Hippocampus_comes
ENSSMAG00000013291	-	92	53.191	ENSHCOG00000013489	-	100	43.860	Hippocampus_comes
ENSSMAG00000013291	-	89	42.045	ENSHCOG00000020670	-	75	51.429	Hippocampus_comes
ENSSMAG00000013291	-	92	31.068	ENSKMAG00000014184	-	69	38.824	Kryptolebias_marmoratus
ENSSMAG00000013291	-	99	32.673	ENSKMAG00000007699	-	86	39.535	Kryptolebias_marmoratus
ENSSMAG00000013291	-	97	42.857	ENSLBEG00000006161	-	88	37.589	Labrus_bergylta
ENSSMAG00000013291	-	89	45.395	ENSLBEG00000007106	-	75	40.223	Labrus_bergylta
ENSSMAG00000013291	-	94	44.330	ENSLBEG00000001132	-	97	45.045	Labrus_bergylta
ENSSMAG00000013291	-	96	44.118	ENSLBEG00000017407	-	99	35.443	Labrus_bergylta
ENSSMAG00000013291	-	91	37.912	ENSLBEG00000017424	-	99	41.284	Labrus_bergylta
ENSSMAG00000013291	-	98	38.983	ENSLBEG00000011210	-	61	38.579	Labrus_bergylta
ENSSMAG00000013291	-	98	38.710	ENSLOCG00000004208	-	99	41.212	Lepisosteus_oculatus
ENSSMAG00000013291	-	95	42.609	ENSMAMG00000017939	-	95	42.105	Mastacembelus_armatus
ENSSMAG00000013291	-	91	40.940	ENSMZEG00005013907	-	83	37.949	Maylandia_zebra
ENSSMAG00000013291	-	90	49.123	ENSMMOG00000013330	-	67	46.479	Mola_mola
ENSSMAG00000013291	-	90	48.485	ENSMMOG00000017592	-	60	47.619	Mola_mola
ENSSMAG00000013291	-	97	42.623	ENSMALG00000004279	-	88	42.135	Monopterus_albus
ENSSMAG00000013291	-	92	41.429	ENSONIG00000005050	-	84	41.429	Oreochromis_niloticus
ENSSMAG00000013291	-	96	41.667	ENSONIG00000007967	-	72	49.091	Oreochromis_niloticus
ENSSMAG00000013291	-	99	44.388	ENSORLG00000002268	-	90	44.388	Oryzias_latipes
ENSSMAG00000013291	-	85	30.000	ENSORLG00000028711	-	89	37.805	Oryzias_latipes
ENSSMAG00000013291	-	98	37.500	ENSORLG00000021885	-	83	50.000	Oryzias_latipes
ENSSMAG00000013291	-	91	41.975	ENSORLG00020018921	-	83	43.293	Oryzias_latipes_hni
ENSSMAG00000013291	-	91	49.180	ENSORLG00020019227	-	52	47.727	Oryzias_latipes_hni
ENSSMAG00000013291	-	95	41.892	ENSORLG00015018099	-	71	41.892	Oryzias_latipes_hsok
ENSSMAG00000013291	-	94	45.161	ENSOMEG00000005578	-	78	42.056	Oryzias_melastigma
ENSSMAG00000013291	-	88	35.802	ENSPMGG00000019750	-	82	40.625	Periophthalmus_magnuspinnatus
ENSSMAG00000013291	-	91	51.064	ENSPMGG00000002661	-	76	52.294	Periophthalmus_magnuspinnatus
ENSSMAG00000013291	-	91	46.018	ENSPMGG00000002659	-	81	48.624	Periophthalmus_magnuspinnatus
ENSSMAG00000013291	-	92	46.000	ENSPMGG00000006928	-	54	46.000	Periophthalmus_magnuspinnatus
ENSSMAG00000013291	-	92	42.697	ENSPMGG00000009571	-	81	39.106	Periophthalmus_magnuspinnatus
ENSSMAG00000013291	-	91	40.972	ENSPMGG00000002455	-	97	39.506	Periophthalmus_magnuspinnatus
ENSSMAG00000013291	-	99	40.099	ENSPMGG00000007051	-	66	40.260	Periophthalmus_magnuspinnatus
ENSSMAG00000013291	-	95	37.563	ENSPMAG00000004189	-	99	37.209	Petromyzon_marinus
ENSSMAG00000013291	-	92	33.333	ENSPMAG00000002022	-	100	38.272	Petromyzon_marinus
ENSSMAG00000013291	-	92	45.238	ENSPMAG00000000839	-	100	46.552	Petromyzon_marinus
ENSSMAG00000013291	-	91	41.711	ENSPFOG00000009491	-	59	45.522	Poecilia_formosa
ENSSMAG00000013291	-	98	41.111	ENSPFOG00000018860	-	100	41.111	Poecilia_formosa
ENSSMAG00000013291	-	99	42.636	ENSPLAG00000010067	-	67	48.780	Poecilia_latipinna
ENSSMAG00000013291	-	93	42.373	ENSPLAG00000008941	-	92	39.175	Poecilia_latipinna
ENSSMAG00000013291	-	94	40.000	ENSPLAG00000014832	-	91	38.393	Poecilia_latipinna
ENSSMAG00000013291	-	94	40.000	ENSPMEG00000005210	-	80	38.393	Poecilia_mexicana
ENSSMAG00000013291	-	91	42.222	ENSPMEG00000024117	-	59	45.522	Poecilia_mexicana
ENSSMAG00000013291	-	93	37.719	ENSPMEG00000002953	-	72	37.719	Poecilia_mexicana
ENSSMAG00000013291	-	91	30.909	ENSPREG00000008907	-	56	32.624	Poecilia_reticulata
ENSSMAG00000013291	-	91	42.609	ENSPREG00000002603	-	87	47.273	Poecilia_reticulata
ENSSMAG00000013291	-	99	42.400	ENSPREG00000009488	-	100	41.525	Poecilia_reticulata
ENSSMAG00000013291	-	92	50.000	ENSPNYG00000017888	-	63	46.296	Pundamilia_nyererei
ENSSMAG00000013291	-	90	39.459	ENSPNAG00000005946	-	90	40.964	Pygocentrus_nattereri
ENSSMAG00000013291	-	92	42.424	ENSSFOG00015011531	-	99	43.023	Scleropages_formosus
ENSSMAG00000013291	-	92	41.667	ENSSDUG00000013048	-	69	37.736	Seriola_dumerili
ENSSMAG00000013291	-	91	41.667	ENSSDUG00000000905	-	54	42.308	Seriola_dumerili
ENSSMAG00000013291	-	90	39.881	ENSSLDG00000014436	-	86	36.792	Seriola_lalandi_dorsalis
ENSSMAG00000013291	-	95	41.667	ENSSLDG00000011849	-	74	32.181	Seriola_lalandi_dorsalis
ENSSMAG00000013291	-	99	39.344	ENSSPAG00000011544	-	55	46.552	Stegastes_partitus
ENSSMAG00000013291	-	90	45.161	ENSSPAG00000005770	-	57	43.590	Stegastes_partitus
ENSSMAG00000013291	-	91	42.857	ENSSPAG00000011533	-	82	47.664	Stegastes_partitus
ENSSMAG00000013291	-	99	49.206	ENSXETG00000012506	znf91	100	49.206	Xenopus_tropicalis
ENSSMAG00000013291	-	91	41.429	ENSXCOG00000000254	-	65	45.902	Xiphophorus_couchianus
ENSSMAG00000013291	-	91	42.958	ENSXCOG00000003441	-	83	35.021	Xiphophorus_couchianus
ENSSMAG00000013291	-	91	45.055	ENSXCOG00000020768	-	78	41.667	Xiphophorus_couchianus
ENSSMAG00000013291	-	94	40.000	ENSXMAG00000012936	-	89	37.647	Xiphophorus_maculatus