EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSSMAG00000013348 (Gene tree)
Gene ID: -
Gene Symbol: apex1
Alias: hm:zehn1532|wu:fc13d11|zap1|zgc:66204
Full Name: APEX nuclease (multifunctional DNA repair enzyme) 1
Gene Type: protein_coding
Species: Scophthalmus_maximus
Status: putative
Strand: Minus strand
Length: 7052 bases
Position: chr2:9988677-9995728
Accession: ZDB-GENE-040426-2761
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSMAP00000021797	Exo_endo_phos	PF03372.23	2.3e-18	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSMAT00000022053	-	5264	-	ENSSMAP00000021797	315 (aa)	-	-

Gene Model

Click here to download ENSSMAG00000013348's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSMAG00000013348's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSMAG00000013348	apex1	99	65.300	ENSG00000100823	APEX1	87	69.424	Homo_sapiens
ENSSMAG00000013348	apex1	100	86.032	ENSAPOG00000017002	apex1	100	85.714	Acanthochromis_polyacanthus
ENSSMAG00000013348	apex1	99	65.300	ENSAMEG00000005418	APEX1	87	69.203	Ailuropoda_melanoleuca
ENSSMAG00000013348	apex1	88	90.975	ENSACIG00000010653	apex1	94	90.975	Amphilophus_citrinellus
ENSSMAG00000013348	apex1	100	87.302	ENSAOCG00000009649	apex1	100	86.667	Amphiprion_ocellaris
ENSSMAG00000013348	apex1	100	87.619	ENSAPEG00000021453	apex1	100	86.984	Amphiprion_percula
ENSSMAG00000013348	apex1	99	89.137	ENSATEG00000002883	apex1	97	88.217	Anabas_testudineus
ENSSMAG00000013348	apex1	99	68.889	ENSACAG00000008099	APEX1	87	73.285	Anolis_carolinensis
ENSSMAG00000013348	apex1	99	66.246	ENSANAG00000030117	APEX1	87	70.144	Aotus_nancymaae
ENSSMAG00000013348	apex1	87	90.545	ENSACLG00000018441	apex1	100	87.302	Astatotilapia_calliptera
ENSSMAG00000013348	apex1	99	84.076	ENSAMXG00000034699	apex1	89	87.726	Astyanax_mexicanus
ENSSMAG00000013348	apex1	99	64.557	ENSBTAG00000002745	APEX1	87	68.841	Bos_taurus
ENSSMAG00000013348	apex1	90	44.755	WBGene00001372	exo-3	92	45.693	Caenorhabditis_elegans
ENSSMAG00000013348	apex1	99	66.246	ENSCJAG00000009726	APEX1	87	70.144	Callithrix_jacchus
ENSSMAG00000013348	apex1	99	64.873	ENSCAFG00000032033	APEX1	87	69.424	Canis_familiaris
ENSSMAG00000013348	apex1	54	58.235	ENSCAFG00020023002	-	73	66.412	Canis_lupus_dingo
ENSSMAG00000013348	apex1	99	64.873	ENSCAFG00020014377	-	87	69.424	Canis_lupus_dingo
ENSSMAG00000013348	apex1	99	64.557	ENSCHIG00000007298	-	87	68.841	Capra_hircus
ENSSMAG00000013348	apex1	87	55.273	ENSCHIG00000014537	-	87	55.273	Capra_hircus
ENSSMAG00000013348	apex1	99	64.353	ENSTSYG00000034813	APEX1	87	67.986	Carlito_syrichta
ENSSMAG00000013348	apex1	91	61.379	ENSCAPG00000016235	APEX1	91	69.068	Cavia_aperea
ENSSMAG00000013348	apex1	99	66.562	ENSCPOG00000030909	APEX1	87	69.784	Cavia_porcellus
ENSSMAG00000013348	apex1	99	56.782	ENSCCAG00000031931	-	87	59.353	Cebus_capucinus
ENSSMAG00000013348	apex1	99	66.246	ENSCCAG00000033056	-	87	70.144	Cebus_capucinus
ENSSMAG00000013348	apex1	99	64.984	ENSCATG00000015580	APEX1	87	69.065	Cercocebus_atys
ENSSMAG00000013348	apex1	99	65.300	ENSCLAG00000001002	APEX1	87	69.065	Chinchilla_lanigera
ENSSMAG00000013348	apex1	99	65.300	ENSCSAG00000016685	-	87	69.424	Chlorocebus_sabaeus
ENSSMAG00000013348	apex1	99	65.300	ENSCSAG00000016670	-	87	69.424	Chlorocebus_sabaeus
ENSSMAG00000013348	apex1	99	70.253	ENSCPBG00000009567	APEX1	87	74.368	Chrysemys_picta_bellii
ENSSMAG00000013348	apex1	98	53.074	ENSCING00000008137	-	85	57.678	Ciona_intestinalis
ENSSMAG00000013348	apex1	99	45.886	ENSCSAVG00000007144	-	100	51.550	Ciona_savignyi
ENSSMAG00000013348	apex1	99	65.615	ENSCANG00000030726	APEX1	87	69.424	Colobus_angolensis_palliatus
ENSSMAG00000013348	apex1	99	64.127	ENSCGRG00001017046	Apex1	99	64.127	Cricetulus_griseus_chok1gshd
ENSSMAG00000013348	apex1	99	64.127	ENSCGRG00000008984	Apex1	99	64.127	Cricetulus_griseus_crigri
ENSSMAG00000013348	apex1	100	85.714	ENSCSEG00000017499	apex1	99	85.079	Cynoglossus_semilaevis
ENSSMAG00000013348	apex1	100	86.349	ENSCVAG00000022075	apex1	100	85.714	Cyprinodon_variegatus
ENSSMAG00000013348	apex1	99	82.484	ENSDARG00000045843	apex1	96	84.899	Danio_rerio
ENSSMAG00000013348	apex1	99	62.776	ENSDNOG00000042234	APEX1	82	66.304	Dasypus_novemcinctus
ENSSMAG00000013348	apex1	99	64.557	ENSDORG00000001616	Apex1	87	68.705	Dipodomys_ordii
ENSSMAG00000013348	apex1	99	65.931	ENSETEG00000004855	-	87	69.065	Echinops_telfairi
ENSSMAG00000013348	apex1	75	59.244	ENSEBUG00000000622	-	92	59.244	Eptatretus_burgeri
ENSSMAG00000013348	apex1	99	65.300	ENSEASG00005017489	APEX1	64	69.424	Equus_asinus_asinus
ENSSMAG00000013348	apex1	99	65.300	ENSECAG00000022325	APEX1	71	69.424	Equus_caballus
ENSSMAG00000013348	apex1	85	69.517	ENSEEUG00000012569	APEX1	93	69.403	Erinaceus_europaeus
ENSSMAG00000013348	apex1	99	82.222	ENSELUG00000021706	apex1	99	82.540	Esox_lucius
ENSSMAG00000013348	apex1	99	66.246	ENSFCAG00000030869	APEX1	87	70.144	Felis_catus
ENSSMAG00000013348	apex1	99	66.562	ENSFDAG00000006120	APEX1	87	70.504	Fukomys_damarensis
ENSSMAG00000013348	apex1	100	86.349	ENSFHEG00000009031	apex1	83	85.714	Fundulus_heteroclitus
ENSSMAG00000013348	apex1	100	78.413	ENSGMOG00000007943	apex1	99	77.460	Gadus_morhua
ENSSMAG00000013348	apex1	100	86.667	ENSGAFG00000005311	apex1	100	86.349	Gambusia_affinis
ENSSMAG00000013348	apex1	100	90.476	ENSGACG00000019497	apex1	99	92.481	Gasterosteus_aculeatus
ENSSMAG00000013348	apex1	99	69.937	ENSGAGG00000014999	APEX1	87	74.275	Gopherus_agassizii
ENSSMAG00000013348	apex1	99	64.984	ENSGGOG00000002128	APEX1	87	69.065	Gorilla_gorilla
ENSSMAG00000013348	apex1	100	87.619	ENSHBUG00000005894	apex1	100	86.984	Haplochromis_burtoni
ENSSMAG00000013348	apex1	99	66.246	ENSHGLG00000002848	APEX1	87	70.504	Heterocephalus_glaber_female
ENSSMAG00000013348	apex1	99	66.246	ENSHGLG00100017878	APEX1	87	70.504	Heterocephalus_glaber_male
ENSSMAG00000013348	apex1	100	85.759	ENSHCOG00000009961	apex1	100	83.492	Hippocampus_comes
ENSSMAG00000013348	apex1	99	81.270	ENSIPUG00000005799	apex1	89	85.921	Ictalurus_punctatus
ENSSMAG00000013348	apex1	99	64.873	ENSSTOG00000010096	APEX1	87	69.065	Ictidomys_tridecemlineatus
ENSSMAG00000013348	apex1	99	56.962	ENSJJAG00000003660	-	87	60.432	Jaculus_jaculus
ENSSMAG00000013348	apex1	99	64.353	ENSJJAG00000012067	-	87	68.345	Jaculus_jaculus
ENSSMAG00000013348	apex1	88	60.932	ENSJJAG00000020465	-	89	60.791	Jaculus_jaculus
ENSSMAG00000013348	apex1	100	85.079	ENSKMAG00000021171	apex1	100	84.444	Kryptolebias_marmoratus
ENSSMAG00000013348	apex1	100	88.889	ENSLBEG00000010248	apex1	100	88.254	Labrus_bergylta
ENSSMAG00000013348	apex1	99	71.203	ENSLACG00000008617	APEX1	87	76.642	Latimeria_chalumnae
ENSSMAG00000013348	apex1	96	76.797	ENSLOCG00000015516	apex1	95	76.821	Lepisosteus_oculatus
ENSSMAG00000013348	apex1	99	65.931	ENSLAFG00000021872	APEX1	87	69.784	Loxodonta_africana
ENSSMAG00000013348	apex1	99	64.984	ENSMFAG00000002565	APEX1	87	69.065	Macaca_fascicularis
ENSSMAG00000013348	apex1	99	64.984	ENSMMUG00000048039	APEX1	87	69.065	Macaca_mulatta
ENSSMAG00000013348	apex1	99	64.984	ENSMNEG00000036944	APEX1	87	69.065	Macaca_nemestrina
ENSSMAG00000013348	apex1	99	64.984	ENSMLEG00000042125	APEX1	87	69.065	Mandrillus_leucophaeus
ENSSMAG00000013348	apex1	100	88.889	ENSMAMG00000023526	apex1	100	88.254	Mastacembelus_armatus
ENSSMAG00000013348	apex1	87	90.545	ENSMZEG00005014187	apex1	100	87.302	Maylandia_zebra
ENSSMAG00000013348	apex1	99	64.127	ENSMAUG00000013994	Apex1	88	68.345	Mesocricetus_auratus
ENSSMAG00000013348	apex1	99	64.353	ENSMICG00000043554	APEX1	87	68.345	Microcebus_murinus
ENSSMAG00000013348	apex1	99	65.714	ENSMOCG00000013721	Apex1	99	65.714	Microtus_ochrogaster
ENSSMAG00000013348	apex1	100	86.392	ENSMMOG00000010031	apex1	97	84.177	Mola_mola
ENSSMAG00000013348	apex1	88	68.459	ENSMODG00000007125	APEX1	86	69.091	Monodelphis_domestica
ENSSMAG00000013348	apex1	89	83.929	ENSMALG00000011699	apex1	74	83.755	Monopterus_albus
ENSSMAG00000013348	apex1	99	65.924	MGP_CAROLIEiJ_G0019209	Apex1	99	65.924	Mus_caroli
ENSSMAG00000013348	apex1	99	66.032	ENSMUSG00000035960	Apex1	99	66.032	Mus_musculus
ENSSMAG00000013348	apex1	99	65.714	MGP_PahariEiJ_G0030232	Apex1	99	65.714	Mus_pahari
ENSSMAG00000013348	apex1	99	66.032	MGP_SPRETEiJ_G0020101	Apex1	99	66.032	Mus_spretus
ENSSMAG00000013348	apex1	99	63.836	ENSMLUG00000028957	APEX1	86	68.841	Myotis_lucifugus
ENSSMAG00000013348	apex1	87	52.708	ENSNGAG00000021748	-	71	56.962	Nannospalax_galili
ENSSMAG00000013348	apex1	99	64.557	ENSNGAG00000002725	-	87	69.928	Nannospalax_galili
ENSSMAG00000013348	apex1	87	90.545	ENSNBRG00000005334	apex1	91	87.302	Neolamprologus_brichardi
ENSSMAG00000013348	apex1	99	64.984	ENSNLEG00000010839	APEX1	89	69.065	Nomascus_leucogenys
ENSSMAG00000013348	apex1	99	64.577	ENSMEUG00000014519	APEX1	87	68.978	Notamacropus_eugenii
ENSSMAG00000013348	apex1	99	64.127	ENSOPRG00000014029	APEX1	88	68.345	Ochotona_princeps
ENSSMAG00000013348	apex1	80	56.746	ENSODEG00000004777	-	83	56.746	Octodon_degus
ENSSMAG00000013348	apex1	99	51.703	ENSODEG00000006583	-	86	53.873	Octodon_degus
ENSSMAG00000013348	apex1	99	65.931	ENSODEG00000001703	-	87	69.784	Octodon_degus
ENSSMAG00000013348	apex1	88	90.614	ENSONIG00000012089	apex1	100	87.302	Oreochromis_niloticus
ENSSMAG00000013348	apex1	90	67.719	ENSOANG00000008836	APEX1	68	69.091	Ornithorhynchus_anatinus
ENSSMAG00000013348	apex1	99	65.190	ENSOCUG00000005022	APEX1	87	69.784	Oryctolagus_cuniculus
ENSSMAG00000013348	apex1	100	87.619	ENSORLG00000012378	apex1	100	86.984	Oryzias_latipes
ENSSMAG00000013348	apex1	100	87.619	ENSORLG00020021371	apex1	100	86.984	Oryzias_latipes_hni
ENSSMAG00000013348	apex1	100	87.619	ENSORLG00015020089	apex1	100	86.984	Oryzias_latipes_hsok
ENSSMAG00000013348	apex1	100	89.524	ENSOMEG00000018876	apex1	100	88.889	Oryzias_melastigma
ENSSMAG00000013348	apex1	99	65.217	ENSOGAG00000013335	-	87	70.144	Otolemur_garnettii
ENSSMAG00000013348	apex1	99	57.962	ENSOGAG00000029355	-	88	61.871	Otolemur_garnettii
ENSSMAG00000013348	apex1	97	62.418	ENSOARG00000001876	-	86	66.541	Ovis_aries
ENSSMAG00000013348	apex1	99	64.557	ENSOARG00000019740	-	87	68.841	Ovis_aries
ENSSMAG00000013348	apex1	94	55.853	ENSOARG00000014424	-	87	58.242	Ovis_aries
ENSSMAG00000013348	apex1	99	65.300	ENSPPAG00000038760	APEX1	89	69.424	Pan_paniscus
ENSSMAG00000013348	apex1	99	66.246	ENSPPRG00000011794	APEX1	87	70.144	Panthera_pardus
ENSSMAG00000013348	apex1	99	66.246	ENSPTIG00000014829	APEX1	87	70.144	Panthera_tigris_altaica
ENSSMAG00000013348	apex1	99	65.300	ENSPTRG00000006093	APEX1	89	69.424	Pan_troglodytes
ENSSMAG00000013348	apex1	99	64.984	ENSPANG00000022757	APEX1	87	69.065	Papio_anubis
ENSSMAG00000013348	apex1	88	85.507	ENSPKIG00000003504	apex1	99	80.635	Paramormyrops_kingsleyae
ENSSMAG00000013348	apex1	85	76.208	ENSPMGG00000016596	apex1	79	76.208	Periophthalmus_magnuspinnatus
ENSSMAG00000013348	apex1	99	65.079	ENSPEMG00000019097	Apex1	99	65.079	Peromyscus_maniculatus_bairdii
ENSSMAG00000013348	apex1	90	70.671	ENSPMAG00000007275	-	94	71.119	Petromyzon_marinus
ENSSMAG00000013348	apex1	88	67.742	ENSPCIG00000023274	APEX1	86	68.613	Phascolarctos_cinereus
ENSSMAG00000013348	apex1	100	86.984	ENSPFOG00000004178	apex1	100	86.667	Poecilia_formosa
ENSSMAG00000013348	apex1	100	86.667	ENSPLAG00000012779	apex1	100	86.032	Poecilia_latipinna
ENSSMAG00000013348	apex1	100	86.984	ENSPMEG00000019623	apex1	100	86.667	Poecilia_mexicana
ENSSMAG00000013348	apex1	100	86.032	ENSPREG00000014298	apex1	99	85.714	Poecilia_reticulata
ENSSMAG00000013348	apex1	99	65.300	ENSPPYG00000005565	APEX1	87	69.065	Pongo_abelii
ENSSMAG00000013348	apex1	99	63.722	ENSPCAG00000010376	APEX1	87	67.626	Procavia_capensis
ENSSMAG00000013348	apex1	99	64.669	ENSPCOG00000021564	APEX1	87	68.705	Propithecus_coquereli
ENSSMAG00000013348	apex1	99	64.151	ENSPVAG00000010736	APEX1	87	69.065	Pteropus_vampyrus
ENSSMAG00000013348	apex1	87	90.909	ENSPNYG00000023940	apex1	100	87.619	Pundamilia_nyererei
ENSSMAG00000013348	apex1	92	82.818	ENSPNAG00000020897	apex1	85	88.142	Pygocentrus_nattereri
ENSSMAG00000013348	apex1	99	65.397	ENSRNOG00000009663	Apex1	99	65.397	Rattus_norvegicus
ENSSMAG00000013348	apex1	99	65.300	ENSRBIG00000038325	APEX1	86	69.424	Rhinopithecus_bieti
ENSSMAG00000013348	apex1	99	66.246	ENSSBOG00000018921	-	87	70.144	Saimiri_boliviensis_boliviensis
ENSSMAG00000013348	apex1	99	58.095	ENSSBOG00000031372	-	90	61.511	Saimiri_boliviensis_boliviensis
ENSSMAG00000013348	apex1	99	62.112	ENSSHAG00000013524	APEX1	85	68.231	Sarcophilus_harrisii
ENSSMAG00000013348	apex1	99	79.048	ENSSFOG00015001948	apex1	99	80.635	Scleropages_formosus
ENSSMAG00000013348	apex1	100	89.841	ENSSDUG00000016377	apex1	99	89.206	Seriola_dumerili
ENSSMAG00000013348	apex1	100	90.159	ENSSLDG00000023005	apex1	100	89.524	Seriola_lalandi_dorsalis
ENSSMAG00000013348	apex1	90	70.345	ENSSPUG00000000531	APEX1	92	72.527	Sphenodon_punctatus
ENSSMAG00000013348	apex1	100	87.302	ENSSPAG00000000458	apex1	100	86.984	Stegastes_partitus
ENSSMAG00000013348	apex1	99	65.615	ENSSSCG00000040060	-	87	69.565	Sus_scrofa
ENSSMAG00000013348	apex1	92	39.394	ENSSSCG00000039705	-	89	41.155	Sus_scrofa
ENSSMAG00000013348	apex1	75	57.021	ENSTGUG00000014378	APEX1	100	57.021	Taeniopygia_guttata
ENSSMAG00000013348	apex1	100	85.714	ENSTRUG00000004268	apex1	95	86.349	Takifugu_rubripes
ENSSMAG00000013348	apex1	100	85.714	ENSTNIG00000005778	apex1	100	85.397	Tetraodon_nigroviridis
ENSSMAG00000013348	apex1	99	62.461	ENSTBEG00000006405	APEX1	87	65.827	Tupaia_belangeri
ENSSMAG00000013348	apex1	75	67.660	ENSTTRG00000007860	APEX1	100	67.660	Tursiops_truncatus
ENSSMAG00000013348	apex1	99	65.300	ENSUAMG00000010457	APEX1	87	68.705	Ursus_americanus
ENSSMAG00000013348	apex1	99	65.300	ENSUMAG00000009178	APEX1	87	68.705	Ursus_maritimus
ENSSMAG00000013348	apex1	75	62.553	ENSVPAG00000005083	APEX1	100	62.553	Vicugna_pacos
ENSSMAG00000013348	apex1	99	64.557	ENSVVUG00000009010	APEX1	87	69.065	Vulpes_vulpes
ENSSMAG00000013348	apex1	99	67.937	ENSXETG00000024773	apex1	99	66.879	Xenopus_tropicalis
ENSSMAG00000013348	apex1	100	86.349	ENSXCOG00000015233	apex1	99	86.032	Xiphophorus_couchianus
ENSSMAG00000013348	apex1	100	86.349	ENSXMAG00000006195	apex1	100	86.032	Xiphophorus_maculatus