EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSSMAG00000013463 (Gene tree)
Gene ID: -
Gene Symbol: cstf2
Alias: CstF-64|fb11e07|wu:fb11e07|zgc:77730
Full Name: cleavage stimulation factor%2C 3' pre-RNA%2C subunit 2
Gene Type: protein_coding
Species: Scophthalmus_maximus
Status: putative
Strand: Plus strand
Length: 9137 bases
Position: chr13:8799444-8808580
Accession: ZDB-GENE-031118-2
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSMAP00000021990	RRM_1	PF00076.22	1.3e-24	1	1
ENSSMAP00000021977	RRM_1	PF00076.22	1.4e-24	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSMAT00000022236	-	2017	-	ENSSMAP00000021977	507 (aa)	-	-
ENSSMAT00000022247	-	1957	-	ENSSMAP00000021990	487 (aa)	-	-

Gene Model

Click here to download ENSSMAG00000013463's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSMAG00000013463's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSMAG00000013463	cstf2	97	59.354	ENSG00000101811	CSTF2	81	93.956	Homo_sapiens
ENSSMAG00000013463	cstf2	96	89.879	ENSAPOG00000005630	cstf2	96	89.271	Acanthochromis_polyacanthus
ENSSMAG00000013463	cstf2	96	57.825	ENSAMEG00000002082	CSTF2	99	56.187	Ailuropoda_melanoleuca
ENSSMAG00000013463	cstf2	96	85.021	ENSACIG00000012852	cstf2	100	83.773	Amphilophus_citrinellus
ENSSMAG00000013463	cstf2	100	91.176	ENSAOCG00000020905	cstf2	100	90.000	Amphiprion_ocellaris
ENSSMAG00000013463	cstf2	100	91.373	ENSAPEG00000006526	cstf2	100	90.196	Amphiprion_percula
ENSSMAG00000013463	cstf2	100	87.597	ENSATEG00000018186	cstf2	100	87.597	Anabas_testudineus
ENSSMAG00000013463	cstf2	93	58.615	ENSAPLG00000007255	CSTF2	82	83.193	Anas_platyrhynchos
ENSSMAG00000013463	cstf2	97	59.436	ENSANAG00000022342	CSTF2	79	83.817	Aotus_nancymaae
ENSSMAG00000013463	cstf2	100	87.891	ENSACLG00000000779	cstf2	96	85.938	Astatotilapia_calliptera
ENSSMAG00000013463	cstf2	89	89.083	ENSAMXG00000021477	cstf2	72	98.438	Astyanax_mexicanus
ENSSMAG00000013463	cstf2	96	60.485	ENSBTAG00000003547	CSTF2	86	82.988	Bos_taurus
ENSSMAG00000013463	cstf2	97	59.284	ENSCJAG00000004422	CSTF2	98	59.600	Callithrix_jacchus
ENSSMAG00000013463	cstf2	96	58.638	ENSCAFG00020007619	CSTF2	83	83.402	Canis_lupus_dingo
ENSSMAG00000013463	cstf2	96	60.312	ENSCHIG00000016994	CSTF2	86	82.988	Capra_hircus
ENSSMAG00000013463	cstf2	96	59.348	ENSTSYG00000006529	CSTF2	99	56.830	Carlito_syrichta
ENSSMAG00000013463	cstf2	97	60.727	ENSCPOG00000015255	CSTF2	85	92.949	Cavia_porcellus
ENSSMAG00000013463	cstf2	97	59.337	ENSCCAG00000032975	CSTF2	99	57.143	Cebus_capucinus
ENSSMAG00000013463	cstf2	97	60.638	ENSCATG00000022835	CSTF2	99	58.633	Cercocebus_atys
ENSSMAG00000013463	cstf2	96	60.801	ENSCLAG00000001904	CSTF2	87	91.195	Chinchilla_lanigera
ENSSMAG00000013463	cstf2	97	58.155	ENSCSAG00000010360	CSTF2	99	56.830	Chlorocebus_sabaeus
ENSSMAG00000013463	cstf2	97	67.972	ENSCPBG00000014293	CSTF2	93	64.811	Chrysemys_picta_bellii
ENSSMAG00000013463	cstf2	97	59.612	ENSCANG00000030612	CSTF2	99	58.633	Colobus_angolensis_palliatus
ENSSMAG00000013463	cstf2	96	86.526	ENSCVAG00000005731	cstf2	100	84.825	Cyprinodon_variegatus
ENSSMAG00000013463	cstf2	77	100.000	ENSDARG00000090788	cstf2	97	71.815	Danio_rerio
ENSSMAG00000013463	cstf2	97	60.585	ENSDORG00000007195	Cstf2	85	93.506	Dipodomys_ordii
ENSSMAG00000013463	cstf2	97	57.990	ENSEASG00005001216	CSTF2	99	56.830	Equus_asinus_asinus
ENSSMAG00000013463	cstf2	97	58.644	ENSECAG00000009325	CSTF2	99	56.830	Equus_caballus
ENSSMAG00000013463	cstf2	96	59.520	ENSFCAG00000007000	CSTF2	99	56.661	Felis_catus
ENSSMAG00000013463	cstf2	88	56.918	ENSFALG00000003859	CSTF2	83	81.905	Ficedula_albicollis
ENSSMAG00000013463	cstf2	97	59.455	ENSFDAG00000002416	CSTF2	79	83.817	Fukomys_damarensis
ENSSMAG00000013463	cstf2	96	85.972	ENSFHEG00000017065	cstf2	96	83.588	Fundulus_heteroclitus
ENSSMAG00000013463	cstf2	96	76.681	ENSGMOG00000005145	cstf2	100	76.261	Gadus_morhua
ENSSMAG00000013463	cstf2	97	61.390	ENSGALG00000006760	CSTF2	98	61.014	Gallus_gallus
ENSSMAG00000013463	cstf2	96	84.948	ENSGAFG00000020027	cstf2	100	81.746	Gambusia_affinis
ENSSMAG00000013463	cstf2	97	82.227	ENSGACG00000017326	cstf2	98	81.961	Gasterosteus_aculeatus
ENSSMAG00000013463	cstf2	97	58.007	ENSGAGG00000006037	CSTF2	87	84.337	Gopherus_agassizii
ENSSMAG00000013463	cstf2	97	59.863	ENSGGOG00000022267	CSTF2	99	58.633	Gorilla_gorilla
ENSSMAG00000013463	cstf2	100	87.938	ENSHBUG00000016183	cstf2	96	86.187	Haplochromis_burtoni
ENSSMAG00000013463	cstf2	97	59.455	ENSHGLG00000000659	-	88	89.697	Heterocephalus_glaber_female
ENSSMAG00000013463	cstf2	97	59.455	ENSHGLG00100001130	-	88	89.697	Heterocephalus_glaber_male
ENSSMAG00000013463	cstf2	96	85.593	ENSHCOG00000005157	cstf2	96	84.958	Hippocampus_comes
ENSSMAG00000013463	cstf2	98	70.209	ENSIPUG00000017839	cstf2	97	63.689	Ictalurus_punctatus
ENSSMAG00000013463	cstf2	97	60.069	ENSSTOG00000023445	CSTF2	87	91.195	Ictidomys_tridecemlineatus
ENSSMAG00000013463	cstf2	96	59.756	ENSJJAG00000020507	Cstf2	87	91.195	Jaculus_jaculus
ENSSMAG00000013463	cstf2	100	84.940	ENSKMAG00000001068	cstf2	100	84.739	Kryptolebias_marmoratus
ENSSMAG00000013463	cstf2	65	96.667	ENSLBEG00000028720	cstf2	94	96.667	Labrus_bergylta
ENSSMAG00000013463	cstf2	97	60.231	ENSLACG00000015927	CSTF2	99	58.773	Latimeria_chalumnae
ENSSMAG00000013463	cstf2	98	85.938	ENSLOCG00000015300	cstf2	70	90.566	Lepisosteus_oculatus
ENSSMAG00000013463	cstf2	96	59.445	ENSLAFG00000000474	CSTF2	86	83.402	Loxodonta_africana
ENSSMAG00000013463	cstf2	97	59.612	ENSMFAG00000043888	CSTF2	99	58.633	Macaca_fascicularis
ENSSMAG00000013463	cstf2	97	59.612	ENSMMUG00000013008	CSTF2	99	58.633	Macaca_mulatta
ENSSMAG00000013463	cstf2	97	59.612	ENSMNEG00000041824	CSTF2	99	58.633	Macaca_nemestrina
ENSSMAG00000013463	cstf2	97	59.612	ENSMLEG00000036870	CSTF2	99	58.633	Mandrillus_leucophaeus
ENSSMAG00000013463	cstf2	94	91.458	ENSMAMG00000020364	cstf2	96	90.208	Mastacembelus_armatus
ENSSMAG00000013463	cstf2	100	87.891	ENSMZEG00005007200	cstf2	100	85.938	Maylandia_zebra
ENSSMAG00000013463	cstf2	89	69.620	ENSMGAG00000004139	CSTF2	83	86.792	Meleagris_gallopavo
ENSSMAG00000013463	cstf2	97	59.354	ENSMICG00000014121	CSTF2	79	85.062	Microcebus_murinus
ENSSMAG00000013463	cstf2	96	77.682	ENSMMOG00000000538	cstf2	96	76.132	Mola_mola
ENSSMAG00000013463	cstf2	97	58.940	ENSMODG00000011785	CSTF2	99	57.576	Monodelphis_domestica
ENSSMAG00000013463	cstf2	94	77.419	MGP_CAROLIEiJ_G0033383	Cstf2	86	91.139	Mus_caroli
ENSSMAG00000013463	cstf2	96	58.596	ENSMUSG00000031256	Cstf2	86	91.139	Mus_musculus
ENSSMAG00000013463	cstf2	94	77.419	MGP_PahariEiJ_G0031923	Cstf2	79	83.817	Mus_pahari
ENSSMAG00000013463	cstf2	96	58.596	MGP_SPRETEiJ_G0034548	Cstf2	86	91.139	Mus_spretus
ENSSMAG00000013463	cstf2	97	55.312	ENSMPUG00000002339	CSTF2	80	83.402	Mustela_putorius_furo
ENSSMAG00000013463	cstf2	96	56.140	ENSMLUG00000004598	CSTF2	78	83.402	Myotis_lucifugus
ENSSMAG00000013463	cstf2	93	80.255	ENSNBRG00000021694	cstf2	100	79.406	Neolamprologus_brichardi
ENSSMAG00000013463	cstf2	97	59.520	ENSNLEG00000007510	CSTF2	99	58.633	Nomascus_leucogenys
ENSSMAG00000013463	cstf2	77	68.095	ENSMEUG00000011186	-	69	60.941	Notamacropus_eugenii
ENSSMAG00000013463	cstf2	82	78.351	ENSOPRG00000003106	CSTF2	78	78.351	Ochotona_princeps
ENSSMAG00000013463	cstf2	92	93.089	ENSONIG00000002631	cstf2	78	96.429	Oreochromis_niloticus
ENSSMAG00000013463	cstf2	96	59.725	ENSOCUG00000010468	CSTF2	77	63.927	Oryctolagus_cuniculus
ENSSMAG00000013463	cstf2	96	86.345	ENSORLG00000001380	cstf2	100	85.049	Oryzias_latipes
ENSSMAG00000013463	cstf2	96	86.555	ENSORLG00020021917	cstf2	100	85.243	Oryzias_latipes_hni
ENSSMAG00000013463	cstf2	96	86.555	ENSORLG00015011996	cstf2	100	85.243	Oryzias_latipes_hsok
ENSSMAG00000013463	cstf2	100	87.726	ENSOMEG00000015507	cstf2	100	87.041	Oryzias_melastigma
ENSSMAG00000013463	cstf2	94	78.439	ENSOGAG00000011192	CSTF2	79	82.917	Otolemur_garnettii
ENSSMAG00000013463	cstf2	96	60.312	ENSOARG00000001022	CSTF2	86	82.988	Ovis_aries
ENSSMAG00000013463	cstf2	97	59.863	ENSPPAG00000031804	CSTF2	99	58.633	Pan_paniscus
ENSSMAG00000013463	cstf2	96	59.520	ENSPPRG00000022492	CSTF2	99	56.661	Panthera_pardus
ENSSMAG00000013463	cstf2	96	59.177	ENSPTIG00000009922	CSTF2	99	56.324	Panthera_tigris_altaica
ENSSMAG00000013463	cstf2	97	59.863	ENSPTRG00000022090	CSTF2	99	58.633	Pan_troglodytes
ENSSMAG00000013463	cstf2	97	59.612	ENSPANG00000002303	CSTF2	79	83.817	Papio_anubis
ENSSMAG00000013463	cstf2	98	72.584	ENSPKIG00000005033	cstf2	92	72.967	Paramormyrops_kingsleyae
ENSSMAG00000013463	cstf2	96	89.957	ENSPMGG00000006534	cstf2	96	88.675	Periophthalmus_magnuspinnatus
ENSSMAG00000013463	cstf2	93	60.141	ENSPCIG00000002989	CSTF2	99	56.951	Phascolarctos_cinereus
ENSSMAG00000013463	cstf2	96	85.102	ENSPLAG00000011176	cstf2	100	79.371	Poecilia_latipinna
ENSSMAG00000013463	cstf2	96	85.041	ENSPMEG00000017743	cstf2	100	82.051	Poecilia_mexicana
ENSSMAG00000013463	cstf2	65	90.361	ENSPREG00000011481	cstf2	100	78.097	Poecilia_reticulata
ENSSMAG00000013463	cstf2	97	58.155	ENSPPYG00000020541	CSTF2	99	56.830	Pongo_abelii
ENSSMAG00000013463	cstf2	97	59.649	ENSPCOG00000027744	CSTF2	99	55.966	Propithecus_coquereli
ENSSMAG00000013463	cstf2	93	49.553	ENSPVAG00000008342	CSTF2	87	58.333	Pteropus_vampyrus
ENSSMAG00000013463	cstf2	100	81.944	ENSPNYG00000010852	cstf2	100	89.130	Pundamilia_nyererei
ENSSMAG00000013463	cstf2	96	71.751	ENSPNAG00000018887	cstf2	97	68.985	Pygocentrus_nattereri
ENSSMAG00000013463	cstf2	96	58.390	ENSRNOG00000048025	Cstf2	82	63.470	Rattus_norvegicus
ENSSMAG00000013463	cstf2	97	60.000	ENSRBIG00000030745	CSTF2	99	59.132	Rhinopithecus_bieti
ENSSMAG00000013463	cstf2	97	59.612	ENSRROG00000045042	CSTF2	99	58.633	Rhinopithecus_roxellana
ENSSMAG00000013463	cstf2	97	59.337	ENSSBOG00000021649	CSTF2	79	83.817	Saimiri_boliviensis_boliviensis
ENSSMAG00000013463	cstf2	86	83.673	ENSSHAG00000003681	CSTF2	72	84.906	Sarcophilus_harrisii
ENSSMAG00000013463	cstf2	96	72.868	ENSSFOG00015006348	cstf2	97	68.972	Scleropages_formosus
ENSSMAG00000013463	cstf2	97	60.980	ENSSPUG00000005288	-	52	85.597	Sphenodon_punctatus
ENSSMAG00000013463	cstf2	95	61.034	ENSSSCG00000012486	CSTF2	98	59.432	Sus_scrofa
ENSSMAG00000013463	cstf2	97	82.738	ENSTNIG00000016860	cstf2	99	82.329	Tetraodon_nigroviridis
ENSSMAG00000013463	cstf2	96	59.014	ENSUAMG00000026605	CSTF2	86	83.402	Ursus_americanus
ENSSMAG00000013463	cstf2	97	62.007	ENSUMAG00000012417	CSTF2	85	82.988	Ursus_maritimus
ENSSMAG00000013463	cstf2	86	89.091	ENSXETG00000009642	cstf2	98	59.065	Xenopus_tropicalis
ENSSMAG00000013463	cstf2	96	71.023	ENSXCOG00000016436	cstf2	98	94.118	Xiphophorus_couchianus
ENSSMAG00000013463	cstf2	65	89.728	ENSXMAG00000013524	cstf2	100	78.113	Xiphophorus_maculatus