EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSSMAG00000013541 (Gene tree)
Gene ID: -
Gene Symbol: zgc:110045
Alias: -
Full Name: zgc:110045
Gene Type: protein_coding
Species: Scophthalmus_maximus
Status: putative
Strand: Plus strand
Length: 10997 bases
Position: chr15:12893664-12904660
Accession: ZDB-GENE-050706-149
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSMAP00000022154	KH_1	PF00013.29	1.4e-54	1	3
ENSSMAP00000022154	KH_1	PF00013.29	1.4e-54	2	3
ENSSMAP00000022154	KH_1	PF00013.29	1.4e-54	3	3
ENSSMAP00000022207	KH_1	PF00013.29	1.3e-38	1	2
ENSSMAP00000022207	KH_1	PF00013.29	1.3e-38	2	2
ENSSMAP00000022185	KH_1	PF00013.29	2.5e-36	1	2
ENSSMAP00000022185	KH_1	PF00013.29	2.5e-36	2	2
ENSSMAP00000022185	KH_2	PF07650.17	1.2e-11	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSMAT00000022468	-	1029	-	ENSSMAP00000022207	342 (aa)	-	-
ENSSMAT00000022413	-	2820	-	ENSSMAP00000022154	432 (aa)	-	A0A2U9CF91
ENSSMAT00000022444	-	1134	-	ENSSMAP00000022185	237 (aa)	-	-

Gene Model

Click here to download ENSSMAG00000013541's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSMAG00000013541's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSSMAG00000013541	zgc:110045	61	35.616	ENSSMAG00000003793	FUBP3	71	35.616
ENSSMAG00000013541	zgc:110045	100	55.280	ENSSMAG00000005827	pcbp4	94	55.123
ENSSMAG00000013541	zgc:110045	52	34.568	ENSSMAG00000012166	KHSRP	58	34.568
ENSSMAG00000013541	zgc:110045	99	56.512	ENSSMAG00000009392	-	96	56.512
ENSSMAG00000013541	zgc:110045	89	76.415	ENSSMAG00000003135	-	95	76.052
ENSSMAG00000013541	zgc:110045	87	71.845	ENSSMAG00000005182	pcbp2	95	69.745
ENSSMAG00000013541	zgc:110045	73	34.188	ENSSMAG00000017905	-	72	34.188
ENSSMAG00000013541	zgc:110045	78	40.000	ENSSMAG00000007969	hnrpkl	56	46.154
ENSSMAG00000013541	zgc:110045	91	70.698	ENSSMAG00000011929	pcbp3	96	71.613
ENSSMAG00000013541	zgc:110045	71	30.357	ENSSMAG00000019461	hnrnpk	53	44.118
ENSSMAG00000013541	zgc:110045	74	33.099	ENSSMAG00000014262	igf2bp3	64	31.646
ENSSMAG00000013541	zgc:110045	71	35.227	ENSSMAG00000010576	igf2bp2b	66	35.227
ENSSMAG00000013541	zgc:110045	78	40.625	ENSSMAG00000020189	-	54	40.625
ENSSMAG00000013541	zgc:110045	73	33.099	ENSSMAG00000016421	igf2bp1	66	31.579
ENSSMAG00000013541	zgc:110045	87	72.816	ENSSMAG00000012889	PCBP2	95	71.203

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSMAG00000013541	zgc:110045	91	76.389	ENSG00000183570	PCBP3	97	68.857	Homo_sapiens
ENSSMAG00000013541	zgc:110045	91	99.070	ENSAPOG00000023735	zgc:110045	97	98.101	Acanthochromis_polyacanthus
ENSSMAG00000013541	zgc:110045	91	93.953	ENSACIG00000002577	zgc:110045	99	93.088	Amphilophus_citrinellus
ENSSMAG00000013541	zgc:110045	85	94.527	ENSAOCG00000005266	zgc:110045	94	94.527	Amphiprion_ocellaris
ENSSMAG00000013541	zgc:110045	100	95.853	ENSAPEG00000000729	zgc:110045	100	95.853	Amphiprion_percula
ENSSMAG00000013541	zgc:110045	100	92.442	ENSATEG00000011191	zgc:110045	100	92.442	Anabas_testudineus
ENSSMAG00000013541	zgc:110045	100	95.392	ENSACLG00000019285	zgc:110045	100	95.392	Astatotilapia_calliptera
ENSSMAG00000013541	zgc:110045	91	76.389	ENSBTAG00000030775	PCBP3	97	68.857	Bos_taurus
ENSSMAG00000013541	zgc:110045	91	76.389	ENSCAFG00000011907	PCBP3	88	72.289	Canis_familiaris
ENSSMAG00000013541	zgc:110045	91	72.685	ENSCHIG00000015841	PCBP3	87	69.670	Capra_hircus
ENSSMAG00000013541	zgc:110045	92	66.667	ENSTSYG00000005254	PCBP3	96	66.255	Carlito_syrichta
ENSSMAG00000013541	zgc:110045	91	53.456	ENSCAPG00000006767	PCBP3	81	56.231	Cavia_aperea
ENSSMAG00000013541	zgc:110045	91	76.389	ENSCPOG00000003648	PCBP3	89	72.072	Cavia_porcellus
ENSSMAG00000013541	zgc:110045	91	76.389	ENSCCAG00000024561	PCBP3	99	65.507	Cebus_capucinus
ENSSMAG00000013541	zgc:110045	91	76.389	ENSCATG00000038419	PCBP3	97	67.847	Cercocebus_atys
ENSSMAG00000013541	zgc:110045	91	76.389	ENSCLAG00000006667	PCBP3	88	72.072	Chinchilla_lanigera
ENSSMAG00000013541	zgc:110045	91	76.389	ENSCANG00000026757	PCBP3	88	76.677	Colobus_angolensis_palliatus
ENSSMAG00000013541	zgc:110045	91	76.389	ENSCGRG00001006836	Pcbp3	88	72.072	Cricetulus_griseus_chok1gshd
ENSSMAG00000013541	zgc:110045	91	76.389	ENSCGRG00000001837	Pcbp3	88	72.072	Cricetulus_griseus_crigri
ENSSMAG00000013541	zgc:110045	100	95.781	ENSCSEG00000010020	zgc:110045	100	95.781	Cynoglossus_semilaevis
ENSSMAG00000013541	zgc:110045	88	89.952	ENSCVAG00000004726	zgc:110045	93	89.952	Cyprinodon_variegatus
ENSSMAG00000013541	zgc:110045	91	80.930	ENSDARG00000057141	zgc:110045	97	80.184	Danio_rerio
ENSSMAG00000013541	zgc:110045	91	76.389	ENSDNOG00000049518	PCBP3	89	72.072	Dasypus_novemcinctus
ENSSMAG00000013541	zgc:110045	92	68.511	ENSDORG00000003640	Pcbp3	95	68.511	Dipodomys_ordii
ENSSMAG00000013541	zgc:110045	93	71.364	ENSEBUG00000009697	zgc:110045	95	72.081	Eptatretus_burgeri
ENSSMAG00000013541	zgc:110045	91	75.926	ENSEASG00005007068	PCBP3	88	76.358	Equus_asinus_asinus
ENSSMAG00000013541	zgc:110045	91	75.926	ENSECAG00000012413	PCBP3	88	76.358	Equus_caballus
ENSSMAG00000013541	zgc:110045	100	85.812	ENSELUG00000019784	zgc:110045	100	85.812	Esox_lucius
ENSSMAG00000013541	zgc:110045	91	76.389	ENSFCAG00000014812	PCBP3	88	76.358	Felis_catus
ENSSMAG00000013541	zgc:110045	91	76.389	ENSFDAG00000009117	PCBP3	88	76.358	Fukomys_damarensis
ENSSMAG00000013541	zgc:110045	85	92.537	ENSFHEG00000018838	-	92	92.537	Fundulus_heteroclitus
ENSSMAG00000013541	zgc:110045	85	91.262	ENSGMOG00000005953	zgc:110045	93	92.182	Gadus_morhua
ENSSMAG00000013541	zgc:110045	91	97.209	ENSGAFG00000017864	zgc:110045	95	97.209	Gambusia_affinis
ENSSMAG00000013541	zgc:110045	75	81.443	ENSGAFG00000017860	-	100	81.443	Gambusia_affinis
ENSSMAG00000013541	zgc:110045	89	96.244	ENSGACG00000003044	zgc:110045	97	95.860	Gasterosteus_aculeatus
ENSSMAG00000013541	zgc:110045	91	76.389	ENSGGOG00000003683	PCBP3	88	76.677	Gorilla_gorilla
ENSSMAG00000013541	zgc:110045	91	98.140	ENSHBUG00000012495	zgc:110045	97	97.785	Haplochromis_burtoni
ENSSMAG00000013541	zgc:110045	91	76.389	ENSHGLG00000018620	PCBP3	89	72.072	Heterocephalus_glaber_female
ENSSMAG00000013541	zgc:110045	91	76.389	ENSHGLG00100013590	PCBP3	89	72.072	Heterocephalus_glaber_male
ENSSMAG00000013541	zgc:110045	93	90.045	ENSHCOG00000000818	zgc:110045	100	90.045	Hippocampus_comes
ENSSMAG00000013541	zgc:110045	91	77.315	ENSIPUG00000003932	zgc:110045	81	76.606	Ictalurus_punctatus
ENSSMAG00000013541	zgc:110045	91	76.389	ENSSTOG00000007178	PCBP3	88	72.072	Ictidomys_tridecemlineatus
ENSSMAG00000013541	zgc:110045	91	76.389	ENSJJAG00000021192	Pcbp3	88	72.372	Jaculus_jaculus
ENSSMAG00000013541	zgc:110045	100	82.267	ENSKMAG00000016179	-	95	95.897	Kryptolebias_marmoratus
ENSSMAG00000013541	zgc:110045	93	89.286	ENSLBEG00000023074	zgc:110045	97	87.988	Labrus_bergylta
ENSSMAG00000013541	zgc:110045	91	73.611	ENSLAFG00000020835	PCBP3	96	74.359	Loxodonta_africana
ENSSMAG00000013541	zgc:110045	91	76.389	ENSMFAG00000034574	PCBP3	97	67.847	Macaca_fascicularis
ENSSMAG00000013541	zgc:110045	91	76.389	ENSMMUG00000003825	PCBP3	99	70.898	Macaca_mulatta
ENSSMAG00000013541	zgc:110045	91	76.389	ENSMNEG00000035551	PCBP3	97	76.677	Macaca_nemestrina
ENSSMAG00000013541	zgc:110045	91	76.389	ENSMLEG00000038785	PCBP3	97	68.944	Mandrillus_leucophaeus
ENSSMAG00000013541	zgc:110045	91	96.744	ENSMAMG00000014389	zgc:110045	99	96.497	Mastacembelus_armatus
ENSSMAG00000013541	zgc:110045	100	95.392	ENSMZEG00005011785	zgc:110045	100	95.392	Maylandia_zebra
ENSSMAG00000013541	zgc:110045	89	77.358	ENSMAUG00000007036	Pcbp3	87	72.644	Mesocricetus_auratus
ENSSMAG00000013541	zgc:110045	91	75.926	ENSMICG00000012679	PCBP3	88	76.358	Microcebus_murinus
ENSSMAG00000013541	zgc:110045	91	76.389	ENSMOCG00000016127	Pcbp3	88	72.072	Microtus_ochrogaster
ENSSMAG00000013541	zgc:110045	74	90.576	ENSMMOG00000008398	-	100	90.576	Mola_mola
ENSSMAG00000013541	zgc:110045	85	90.050	ENSMMOG00000008399	zgc:110045	95	90.050	Mola_mola
ENSSMAG00000013541	zgc:110045	84	90.955	ENSMALG00000008763	zgc:110045	96	90.955	Monopterus_albus
ENSSMAG00000013541	zgc:110045	73	89.286	ENSMALG00000008782	-	99	89.286	Monopterus_albus
ENSSMAG00000013541	zgc:110045	92	76.712	MGP_CAROLIEiJ_G0015475	Pcbp3	99	73.362	Mus_caroli
ENSSMAG00000013541	zgc:110045	92	76.712	ENSMUSG00000001120	Pcbp3	99	73.362	Mus_musculus
ENSSMAG00000013541	zgc:110045	92	76.712	MGP_PahariEiJ_G0030889	Pcbp3	99	73.362	Mus_pahari
ENSSMAG00000013541	zgc:110045	92	76.712	MGP_SPRETEiJ_G0016288	Pcbp3	99	73.362	Mus_spretus
ENSSMAG00000013541	zgc:110045	91	76.389	ENSMLUG00000003074	PCBP3	88	72.072	Myotis_lucifugus
ENSSMAG00000013541	zgc:110045	91	76.389	ENSNGAG00000005416	Pcbp3	88	72.072	Nannospalax_galili
ENSSMAG00000013541	zgc:110045	100	95.622	ENSNBRG00000017646	zgc:110045	100	95.622	Neolamprologus_brichardi
ENSSMAG00000013541	zgc:110045	91	76.389	ENSNLEG00000002639	PCBP3	88	76.677	Nomascus_leucogenys
ENSSMAG00000013541	zgc:110045	89	72.052	ENSMEUG00000012960	PCBP3	97	66.000	Notamacropus_eugenii
ENSSMAG00000013541	zgc:110045	91	72.685	ENSODEG00000012873	PCBP3	89	69.670	Octodon_degus
ENSSMAG00000013541	zgc:110045	100	91.898	ENSONIG00000010370	zgc:110045	100	91.898	Oreochromis_niloticus
ENSSMAG00000013541	zgc:110045	93	69.549	ENSOANG00000006265	PCBP3	94	69.549	Ornithorhynchus_anatinus
ENSSMAG00000013541	zgc:110045	100	89.862	ENSORLG00000014385	-	100	92.627	Oryzias_latipes
ENSSMAG00000013541	zgc:110045	100	91.475	ENSORLG00020003139	zgc:110045	100	92.166	Oryzias_latipes_hni
ENSSMAG00000013541	zgc:110045	100	93.088	ENSOMEG00000015459	-	100	93.088	Oryzias_melastigma
ENSSMAG00000013541	zgc:110045	91	72.222	ENSOARG00000012704	PCBP3	88	69.789	Ovis_aries
ENSSMAG00000013541	zgc:110045	91	76.389	ENSPPAG00000021940	PCBP3	88	76.677	Pan_paniscus
ENSSMAG00000013541	zgc:110045	91	76.389	ENSPPRG00000003933	PCBP3	88	76.358	Panthera_pardus
ENSSMAG00000013541	zgc:110045	91	56.164	ENSPTIG00000012038	PCBP3	83	73.810	Panthera_tigris_altaica
ENSSMAG00000013541	zgc:110045	91	46.759	ENSPTRG00000014010	PCBP3	97	51.136	Pan_troglodytes
ENSSMAG00000013541	zgc:110045	91	76.389	ENSPANG00000023631	PCBP3	97	67.847	Papio_anubis
ENSSMAG00000013541	zgc:110045	100	77.650	ENSPMGG00000021588	-	99	74.886	Periophthalmus_magnuspinnatus
ENSSMAG00000013541	zgc:110045	90	58.140	ENSPMGG00000022531	-	96	57.604	Periophthalmus_magnuspinnatus
ENSSMAG00000013541	zgc:110045	91	76.389	ENSPEMG00000000587	Pcbp3	88	72.072	Peromyscus_maniculatus_bairdii
ENSSMAG00000013541	zgc:110045	63	70.833	ENSPMAG00000004719	zgc:110045	94	70.833	Petromyzon_marinus
ENSSMAG00000013541	zgc:110045	89	97.170	ENSPFOG00000002348	zgc:110045	100	93.373	Poecilia_formosa
ENSSMAG00000013541	zgc:110045	91	93.023	ENSPLAG00000017488	zgc:110045	95	93.023	Poecilia_latipinna
ENSSMAG00000013541	zgc:110045	91	97.209	ENSPMEG00000012762	zgc:110045	95	97.209	Poecilia_mexicana
ENSSMAG00000013541	zgc:110045	100	90.509	ENSPREG00000001797	zgc:110045	95	96.744	Poecilia_reticulata
ENSSMAG00000013541	zgc:110045	86	76.410	ENSPPYG00000011525	-	94	68.966	Pongo_abelii
ENSSMAG00000013541	zgc:110045	86	58.824	ENSPCAG00000001454	PCBP3	98	57.941	Procavia_capensis
ENSSMAG00000013541	zgc:110045	91	75.926	ENSPCOG00000013797	PCBP3	88	76.358	Propithecus_coquereli
ENSSMAG00000013541	zgc:110045	89	71.616	ENSPVAG00000000832	PCBP3	73	78.788	Pteropus_vampyrus
ENSSMAG00000013541	zgc:110045	75	91.327	ENSPNYG00000004656	-	98	91.327	Pundamilia_nyererei
ENSSMAG00000013541	zgc:110045	93	92.273	ENSPNYG00000004637	zgc:110045	100	92.273	Pundamilia_nyererei
ENSSMAG00000013541	zgc:110045	91	80.930	ENSPNAG00000004501	zgc:110045	97	80.184	Pygocentrus_nattereri
ENSSMAG00000013541	zgc:110045	91	76.389	ENSRROG00000034567	PCBP3	88	76.677	Rhinopithecus_roxellana
ENSSMAG00000013541	zgc:110045	91	76.389	ENSSBOG00000005789	PCBP3	88	76.677	Saimiri_boliviensis_boliviensis
ENSSMAG00000013541	zgc:110045	97	96.232	ENSSDUG00000019371	zgc:110045	100	96.232	Seriola_dumerili
ENSSMAG00000013541	zgc:110045	100	96.774	ENSSLDG00000021064	zgc:110045	100	96.774	Seriola_lalandi_dorsalis
ENSSMAG00000013541	zgc:110045	58	79.562	ENSSARG00000007629	-	100	62.136	Sorex_araneus
ENSSMAG00000013541	zgc:110045	91	99.070	ENSSPAG00000000563	zgc:110045	97	98.418	Stegastes_partitus
ENSSMAG00000013541	zgc:110045	91	76.389	ENSSSCG00000023041	PCBP3	88	76.358	Sus_scrofa
ENSSMAG00000013541	zgc:110045	75	86.224	ENSTRUG00000023273	-	99	86.224	Takifugu_rubripes
ENSSMAG00000013541	zgc:110045	84	93.467	ENSTRUG00000017789	zgc:110045	98	93.467	Takifugu_rubripes
ENSSMAG00000013541	zgc:110045	80	85.567	ENSTNIG00000003546	zgc:110045	96	85.567	Tetraodon_nigroviridis
ENSSMAG00000013541	zgc:110045	91	56.019	ENSTBEG00000011882	-	73	58.650	Tupaia_belangeri
ENSSMAG00000013541	zgc:110045	91	72.685	ENSUAMG00000006491	PCBP3	96	75.725	Ursus_americanus
ENSSMAG00000013541	zgc:110045	76	73.770	ENSUMAG00000025403	PCBP3	88	63.988	Ursus_maritimus
ENSSMAG00000013541	zgc:110045	91	71.296	ENSVVUG00000023862	PCBP3	97	64.286	Vulpes_vulpes
ENSSMAG00000013541	zgc:110045	72	93.567	ENSXCOG00000005968	zgc:110045	87	93.567	Xiphophorus_couchianus
ENSSMAG00000013541	zgc:110045	100	90.972	ENSXMAG00000008030	zgc:110045	100	90.972	Xiphophorus_maculatus