EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSSMAG00000013592 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Scophthalmus_maximus
Status: putative
Strand: Plus strand
Length: 10196 bases
Position: chr2:18074-28269
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSMAP00000022234	RRM_1	PF00076.22	1.1e-12	1	1
ENSSMAP00000022250	RRM_1	PF00076.22	1.1e-12	1	1
ENSSMAP00000022261	RRM_1	PF00076.22	1.4e-12	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSMAT00000022492	-	4028	-	ENSSMAP00000022234	309 (aa)	-	-
ENSSMAT00000022519	-	3694	-	ENSSMAP00000022261	366 (aa)	-	-
ENSSMAT00000022509	-	3737	-	ENSSMAP00000022250	309 (aa)	-	-

Gene Model

Click here to download ENSSMAG00000013592's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSMAG00000013592's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSSMAG00000013592	-	89	47.059	ENSSMAG00000005608	-	75	53.571
ENSSMAG00000013592	-	95	68.121	ENSSMAG00000011147	-	78	84.038
ENSSMAG00000013592	-	91	43.253	ENSSMAG00000001107	raly	70	51.628
ENSSMAG00000013592	-	78	45.608	ENSSMAG00000015907	-	76	54.310

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSMAG00000013592	-	67	57.277	ENSG00000184672	RALYL	91	75.325	Homo_sapiens
ENSSMAG00000013592	-	91	87.324	ENSAPOG00000006963	hnrnpc	92	89.085	Acanthochromis_polyacanthus
ENSSMAG00000013592	-	96	83.775	ENSACIG00000000270	-	99	86.622	Amphilophus_citrinellus
ENSSMAG00000013592	-	96	74.351	ENSACIG00000016568	-	82	82.488	Amphilophus_citrinellus
ENSSMAG00000013592	-	95	74.675	ENSAOCG00000021616	-	78	80.237	Amphiprion_ocellaris
ENSSMAG00000013592	-	91	89.007	ENSAOCG00000003896	-	92	89.085	Amphiprion_ocellaris
ENSSMAG00000013592	-	89	78.445	ENSAPEG00000019962	-	81	80.632	Amphiprion_percula
ENSSMAG00000013592	-	91	89.007	ENSAPEG00000001489	-	92	89.085	Amphiprion_percula
ENSSMAG00000013592	-	91	86.316	ENSATEG00000011734	-	92	88.070	Anabas_testudineus
ENSSMAG00000013592	-	96	67.893	ENSATEG00000018006	-	79	83.645	Anabas_testudineus
ENSSMAG00000013592	-	67	51.770	ENSAPLG00000015574	RALYL	79	50.427	Anas_platyrhynchos
ENSSMAG00000013592	-	71	48.305	ENSACAG00000028464	RALYL	78	50.000	Anolis_carolinensis
ENSSMAG00000013592	-	67	56.808	ENSANAG00000023383	RALYL	78	53.571	Aotus_nancymaae
ENSSMAG00000013592	-	99	81.731	ENSACLG00000000995	-	95	82.215	Astatotilapia_calliptera
ENSSMAG00000013592	-	99	81.410	ENSACLG00000013636	-	89	86.415	Astatotilapia_calliptera
ENSSMAG00000013592	-	84	76.296	ENSACLG00000005707	-	86	79.051	Astatotilapia_calliptera
ENSSMAG00000013592	-	84	76.154	ENSAMXG00000034915	zgc:55733	86	77.551	Astyanax_mexicanus
ENSSMAG00000013592	-	67	77.033	ENSAMXG00000042946	hnrnpc	97	75.263	Astyanax_mexicanus
ENSSMAG00000013592	-	67	56.808	ENSCJAG00000000402	RALYL	78	53.571	Callithrix_jacchus
ENSSMAG00000013592	-	71	50.211	ENSCPOG00000012314	RALYL	78	51.073	Cavia_porcellus
ENSSMAG00000013592	-	67	57.277	ENSCCAG00000025003	RALYL	75	75.325	Cebus_capucinus
ENSSMAG00000013592	-	67	57.277	ENSCATG00000042145	RALYL	78	54.018	Cercocebus_atys
ENSSMAG00000013592	-	71	50.211	ENSCLAG00000005228	RALYL	78	51.073	Chinchilla_lanigera
ENSSMAG00000013592	-	67	50.885	ENSCHOG00000013228	RALYL	74	49.550	Choloepus_hoffmanni
ENSSMAG00000013592	-	67	57.277	ENSCANG00000039144	RALYL	78	54.018	Colobus_angolensis_palliatus
ENSSMAG00000013592	-	71	50.000	ENSCGRG00001009241	Ralyl	78	50.855	Cricetulus_griseus_chok1gshd
ENSSMAG00000013592	-	69	77.419	ENSCSEG00000019769	-	72	77.465	Cynoglossus_semilaevis
ENSSMAG00000013592	-	82	74.806	ENSCSEG00000021349	-	78	76.800	Cynoglossus_semilaevis
ENSSMAG00000013592	-	95	75.962	ENSCVAG00000016981	-	95	74.441	Cyprinodon_variegatus
ENSSMAG00000013592	-	87	68.613	ENSCVAG00000002797	-	85	65.476	Cyprinodon_variegatus
ENSSMAG00000013592	-	91	77.580	ENSDARG00000103845	zgc:55733	85	84.956	Danio_rerio
ENSSMAG00000013592	-	77	80.992	ENSDARG00000053810	hnrnpc	78	77.510	Danio_rerio
ENSSMAG00000013592	-	71	50.420	ENSDORG00000003721	Ralyl	78	51.282	Dipodomys_ordii
ENSSMAG00000013592	-	52	56.322	ENSETEG00000014028	RALYL	81	60.000	Echinops_telfairi
ENSSMAG00000013592	-	72	50.220	ENSEBUG00000006049	RALYL	79	48.661	Eptatretus_burgeri
ENSSMAG00000013592	-	68	46.847	ENSEBUG00000012363	hnrnpc	66	43.805	Eptatretus_burgeri
ENSSMAG00000013592	-	71	50.840	ENSEEUG00000007202	RALYL	80	51.931	Erinaceus_europaeus
ENSSMAG00000013592	-	95	69.868	ENSELUG00000007714	-	88	76.834	Esox_lucius
ENSSMAG00000013592	-	84	77.574	ENSELUG00000004132	-	87	78.599	Esox_lucius
ENSSMAG00000013592	-	67	56.744	ENSFALG00000008647	RALYL	96	57.075	Ficedula_albicollis
ENSSMAG00000013592	-	81	78.277	ENSFHEG00000007278	-	92	71.382	Fundulus_heteroclitus
ENSSMAG00000013592	-	91	81.338	ENSFHEG00000003605	-	93	80.420	Fundulus_heteroclitus
ENSSMAG00000013592	-	67	56.338	ENSGALG00000036938	RALYL	78	50.855	Gallus_gallus
ENSSMAG00000013592	-	91	82.168	ENSGAFG00000020486	-	93	82.168	Gambusia_affinis
ENSSMAG00000013592	-	96	73.397	ENSGAFG00000020992	-	81	80.723	Gambusia_affinis
ENSSMAG00000013592	-	85	78.810	ENSGACG00000017772	-	96	78.884	Gasterosteus_aculeatus
ENSSMAG00000013592	-	69	76.018	ENSGACG00000018932	-	85	73.934	Gasterosteus_aculeatus
ENSSMAG00000013592	-	67	57.277	ENSGGOG00000000841	RALYL	78	54.018	Gorilla_gorilla
ENSSMAG00000013592	-	99	73.209	ENSHBUG00000010527	-	79	78.431	Haplochromis_burtoni
ENSSMAG00000013592	-	99	82.051	ENSHBUG00000018342	-	95	82.550	Haplochromis_burtoni
ENSSMAG00000013592	-	71	49.789	ENSHGLG00000004866	RALYL	78	50.644	Heterocephalus_glaber_female
ENSSMAG00000013592	-	71	49.789	ENSHGLG00100017480	RALYL	78	50.644	Heterocephalus_glaber_male
ENSSMAG00000013592	-	83	77.289	ENSHCOG00000012333	hnrnpc	86	77.358	Hippocampus_comes
ENSSMAG00000013592	-	82	77.519	ENSIPUG00000011271	hnrnpc	97	79.464	Ictalurus_punctatus
ENSSMAG00000013592	-	84	78.077	ENSIPUG00000008666	zgc:55733	99	77.130	Ictalurus_punctatus
ENSSMAG00000013592	-	71	50.000	ENSSTOG00000012583	RALYL	80	50.855	Ictidomys_tridecemlineatus
ENSSMAG00000013592	-	90	85.106	ENSKMAG00000011170	-	85	84.848	Kryptolebias_marmoratus
ENSSMAG00000013592	-	80	77.165	ENSKMAG00000018265	-	78	78.740	Kryptolebias_marmoratus
ENSSMAG00000013592	-	99	71.384	ENSLBEG00000006193	-	79	79.842	Labrus_bergylta
ENSSMAG00000013592	-	87	78.571	ENSLBEG00000024418	-	85	75.781	Labrus_bergylta
ENSSMAG00000013592	-	86	83.209	ENSLBEG00000006979	-	85	81.377	Labrus_bergylta
ENSSMAG00000013592	-	83	67.557	ENSLOCG00000002560	hnrnpc	85	69.478	Lepisosteus_oculatus
ENSSMAG00000013592	-	67	57.277	ENSMNEG00000033288	RALYL	78	54.018	Macaca_nemestrina
ENSSMAG00000013592	-	67	57.277	ENSMLEG00000038284	RALYL	78	54.018	Mandrillus_leucophaeus
ENSSMAG00000013592	-	84	76.296	ENSMAMG00000008033	-	88	78.039	Mastacembelus_armatus
ENSSMAG00000013592	-	84	86.415	ENSMAMG00000012236	-	87	87.732	Mastacembelus_armatus
ENSSMAG00000013592	-	99	81.731	ENSMZEG00005020460	-	95	82.215	Maylandia_zebra
ENSSMAG00000013592	-	99	73.209	ENSMZEG00005024249	-	80	79.051	Maylandia_zebra
ENSSMAG00000013592	-	71	50.000	ENSMAUG00000015149	Ralyl	78	50.855	Mesocricetus_auratus
ENSSMAG00000013592	-	71	53.982	ENSMICG00000005558	RALYL	78	75.325	Microcebus_murinus
ENSSMAG00000013592	-	71	50.000	ENSMOCG00000017371	Ralyl	78	50.855	Microtus_ochrogaster
ENSSMAG00000013592	-	81	88.627	ENSMMOG00000021465	-	88	90.400	Mola_mola
ENSSMAG00000013592	-	88	72.993	ENSMMOG00000019520	-	82	84.360	Mola_mola
ENSSMAG00000013592	-	81	76.680	ENSMALG00000007520	-	90	77.695	Monopterus_albus
ENSSMAG00000013592	-	84	78.571	ENSMALG00000014623	-	79	78.486	Monopterus_albus
ENSSMAG00000013592	-	71	49.580	ENSMUSG00000039717	Ralyl	91	74.026	Mus_musculus
ENSSMAG00000013592	-	71	51.261	ENSMPUG00000010724	RALYL	78	50.000	Mustela_putorius_furo
ENSSMAG00000013592	-	71	50.000	ENSNGAG00000013375	Ralyl	78	50.855	Nannospalax_galili
ENSSMAG00000013592	-	99	73.832	ENSNBRG00000015676	-	95	76.144	Neolamprologus_brichardi
ENSSMAG00000013592	-	96	82.119	ENSNBRG00000004912	-	97	84.899	Neolamprologus_brichardi
ENSSMAG00000013592	-	71	54.667	ENSNLEG00000002702	RALYL	74	54.018	Nomascus_leucogenys
ENSSMAG00000013592	-	57	47.150	ENSOPRG00000013650	-	98	45.550	Ochotona_princeps
ENSSMAG00000013592	-	71	50.633	ENSODEG00000001012	RALYL	78	51.502	Octodon_degus
ENSSMAG00000013592	-	99	73.209	ENSONIG00000018350	-	79	78.431	Oreochromis_niloticus
ENSSMAG00000013592	-	99	79.233	ENSONIG00000007859	-	96	81.728	Oreochromis_niloticus
ENSSMAG00000013592	-	84	78.195	ENSORLG00000009999	-	87	78.571	Oryzias_latipes
ENSSMAG00000013592	-	80	77.395	ENSORLG00000003144	-	78	78.927	Oryzias_latipes
ENSSMAG00000013592	-	84	77.820	ENSORLG00020018228	hnrnpc	87	78.195	Oryzias_latipes_hni
ENSSMAG00000013592	-	84	78.195	ENSORLG00015019755	-	87	78.571	Oryzias_latipes_hsok
ENSSMAG00000013592	-	80	77.395	ENSORLG00015009460	-	78	78.927	Oryzias_latipes_hsok
ENSSMAG00000013592	-	84	76.779	ENSOMEG00000020488	-	87	77.528	Oryzias_melastigma
ENSSMAG00000013592	-	80	79.134	ENSOMEG00000022665	-	79	80.709	Oryzias_melastigma
ENSSMAG00000013592	-	67	57.277	ENSPPAG00000038705	RALYL	78	54.018	Pan_paniscus
ENSSMAG00000013592	-	71	54.185	ENSPPRG00000018612	RALYL	78	53.571	Panthera_pardus
ENSSMAG00000013592	-	71	54.185	ENSPTIG00000020331	RALYL	78	53.571	Panthera_tigris_altaica
ENSSMAG00000013592	-	67	57.277	ENSPTRG00000020381	RALYL	78	54.018	Pan_troglodytes
ENSSMAG00000013592	-	67	57.277	ENSPANG00000029305	RALYL	78	54.018	Papio_anubis
ENSSMAG00000013592	-	99	74.608	ENSPKIG00000022837	-	95	79.605	Paramormyrops_kingsleyae
ENSSMAG00000013592	-	91	76.109	ENSPKIG00000008592	-	87	78.777	Paramormyrops_kingsleyae
ENSSMAG00000013592	-	71	49.580	ENSPSIG00000011135	RALYL	78	50.000	Pelodiscus_sinensis
ENSSMAG00000013592	-	70	87.156	ENSPMGG00000013144	-	81	83.568	Periophthalmus_magnuspinnatus
ENSSMAG00000013592	-	66	79.412	ENSPMGG00000017774	-	92	64.758	Periophthalmus_magnuspinnatus
ENSSMAG00000013592	-	71	50.000	ENSPEMG00000016447	Ralyl	78	50.855	Peromyscus_maniculatus_bairdii
ENSSMAG00000013592	-	67	53.712	ENSPMAG00000002407	RALYL	96	51.982	Petromyzon_marinus
ENSSMAG00000013592	-	95	73.377	ENSPFOG00000002643	-	77	81.124	Poecilia_formosa
ENSSMAG00000013592	-	91	83.624	ENSPFOG00000001583	-	93	83.275	Poecilia_formosa
ENSSMAG00000013592	-	91	83.566	ENSPLAG00000015305	-	93	83.217	Poecilia_latipinna
ENSSMAG00000013592	-	79	79.518	ENSPLAG00000000061	-	76	81.124	Poecilia_latipinna
ENSSMAG00000013592	-	91	83.916	ENSPMEG00000004802	-	93	83.217	Poecilia_mexicana
ENSSMAG00000013592	-	95	73.377	ENSPMEG00000016524	-	77	83.133	Poecilia_mexicana
ENSSMAG00000013592	-	91	80.420	ENSPREG00000007928	-	93	81.119	Poecilia_reticulata
ENSSMAG00000013592	-	79	78.715	ENSPREG00000001852	-	82	80.321	Poecilia_reticulata
ENSSMAG00000013592	-	71	43.891	ENSPPYG00000018710	-	72	43.836	Pongo_abelii
ENSSMAG00000013592	-	71	49.789	ENSPVAG00000010821	RALYL	78	50.644	Pteropus_vampyrus
ENSSMAG00000013592	-	97	67.434	ENSPNYG00000003747	-	85	78.431	Pundamilia_nyererei
ENSSMAG00000013592	-	87	81.588	ENSPNYG00000020293	-	86	86.400	Pundamilia_nyererei
ENSSMAG00000013592	-	79	78.862	ENSPNAG00000015686	hnrnpc	84	76.113	Pygocentrus_nattereri
ENSSMAG00000013592	-	84	74.157	ENSPNAG00000019200	zgc:55733	81	75.000	Pygocentrus_nattereri
ENSSMAG00000013592	-	67	57.277	ENSRROG00000023925	RALYL	80	73.418	Rhinopithecus_roxellana
ENSSMAG00000013592	-	74	82.479	ENSSFOG00015012924	-	78	93.506	Scleropages_formosus
ENSSMAG00000013592	-	76	78.243	ENSSFOG00015012015	-	81	83.962	Scleropages_formosus
ENSSMAG00000013592	-	99	76.582	ENSSDUG00000006730	-	80	80.952	Seriola_dumerili
ENSSMAG00000013592	-	99	85.531	ENSSDUG00000001723	-	95	88.215	Seriola_dumerili
ENSSMAG00000013592	-	84	80.524	ENSSLDG00000007474	-	87	80.952	Seriola_lalandi_dorsalis
ENSSMAG00000013592	-	89	89.964	ENSSLDG00000007454	-	87	90.909	Seriola_lalandi_dorsalis
ENSSMAG00000013592	-	99	73.585	ENSSPAG00000013996	-	79	80.237	Stegastes_partitus
ENSSMAG00000013592	-	90	90.036	ENSSPAG00000023204	-	87	90.335	Stegastes_partitus
ENSSMAG00000013592	-	70	50.644	ENSTGUG00000011689	RALYL	78	51.528	Taeniopygia_guttata
ENSSMAG00000013592	-	81	82.609	ENSTRUG00000020158	-	82	83.936	Takifugu_rubripes
ENSSMAG00000013592	-	81	79.537	ENSTNIG00000007427	-	83	80.392	Tetraodon_nigroviridis
ENSSMAG00000013592	-	80	77.108	ENSTNIG00000000334	-	93	76.190	Tetraodon_nigroviridis
ENSSMAG00000013592	-	67	47.807	ENSTBEG00000005551	RALYL	92	45.267	Tupaia_belangeri
ENSSMAG00000013592	-	71	47.718	ENSTTRG00000015762	RALYL	78	49.561	Tursiops_truncatus
ENSSMAG00000013592	-	71	49.115	ENSVPAG00000008501	RALYL	78	49.327	Vicugna_pacos
ENSSMAG00000013592	-	87	76.000	ENSXCOG00000006552	-	81	75.697	Xiphophorus_couchianus
ENSSMAG00000013592	-	50	87.730	ENSXCOG00000019434	-	69	86.420	Xiphophorus_couchianus
ENSSMAG00000013592	-	91	82.517	ENSXMAG00000009333	-	93	81.469	Xiphophorus_maculatus
ENSSMAG00000013592	-	79	78.715	ENSXMAG00000022849	-	80	80.321	Xiphophorus_maculatus