EuRBPDB

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  • Description
  • RBDs
  • Transcripts
  • Gene Model
  • PPI
  • Paralogs
  • Orthologs
Description
Ensembl ID
ENSSMAG00000013779 (Gene tree)
Gene ID
-
Gene Symbol
-
Alias
-
Full Name
-
Gene Type
protein_coding
Species
Scophthalmus_maximus
Status
putative
Strand
Plus strand
Length
8703 bases
Position
chr19:19429207-19437909
Accession
-
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
ENSSMAP00000022545RRM_1PF00076.221.1e-3413
ENSSMAP00000022545RRM_1PF00076.221.1e-3423
ENSSMAP00000022545RRM_1PF00076.221.1e-3433
ENSSMAP00000022575RRM_1PF00076.221.1e-3413
ENSSMAP00000022575RRM_1PF00076.221.1e-3423
ENSSMAP00000022575RRM_1PF00076.221.1e-3433
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
ENSSMAT00000022807-3323-ENSSMAP00000022545466 (aa)--
ENSSMAT00000022837-3323-ENSSMAP00000022575466 (aa)--
Gene Model
Click here to download ENSSMAG00000013779's gene model file
Protein-Protein Interaction (PPI)

Clik here to download ENSSMAG00000013779's network
Paralogs
Ensembl IDGene SymbolCoverageIdentiy ParalogGene SymbolCoverageIdentiy
ENSSMAG00000013779-6237.255ENSSMAG00000016381puf60b5237.255
ENSSMAG00000013779-10073.950ENSSMAG00000012582u2af2a9973.617
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
ENSSMAG00000013779-10072.766ENSG00000063244U2AF29983.987Homo_sapiens
ENSSMAG00000013779-10096.996ENSAPOG00000002208-10096.996Acanthochromis_polyacanthus
ENSSMAG00000013779-6578.571ENSAPOG00000023155u2af2a9978.571Acanthochromis_polyacanthus
ENSSMAG00000013779-7779.282ENSAMEG00000003864U2AF29874.815Ailuropoda_melanoleuca
ENSSMAG00000013779-9794.553ENSACIG00000014173-9994.553Amphilophus_citrinellus
ENSSMAG00000013779-8182.368ENSACIG00000005749u2af2a9280.808Amphilophus_citrinellus
ENSSMAG00000013779-10097.425ENSAOCG00000003595-10097.425Amphiprion_ocellaris
ENSSMAG00000013779-10075.532ENSAOCG00000015571u2af2a10074.255Amphiprion_ocellaris
ENSSMAG00000013779-9895.385ENSAPEG00000020062-9895.385Amphiprion_percula
ENSSMAG00000013779-8182.632ENSAPEG00000009376u2af2a9381.061Amphiprion_percula
ENSSMAG00000013779-10073.517ENSATEG00000022332u2af2a9973.617Anabas_testudineus
ENSSMAG00000013779-9797.111ENSATEG00000020577-9997.111Anabas_testudineus
ENSSMAG00000013779-10073.461ENSACAG00000015489U2AF29975.636Anolis_carolinensis
ENSSMAG00000013779-8983.636ENSANAG00000028042U2AF29973.554Aotus_nancymaae
ENSSMAG00000013779-10097.210ENSACLG00000020793-10097.210Astatotilapia_calliptera
ENSSMAG00000013779-10075.319ENSACLG00000022181u2af2a9974.944Astatotilapia_calliptera
ENSSMAG00000013779-10072.708ENSAMXG00000039454u2af2b9973.093Astyanax_mexicanus
ENSSMAG00000013779-10070.231ENSAMXG00000033347u2af2a9971.250Astyanax_mexicanus
ENSSMAG00000013779-10074.145ENSBTAG00000002830U2AF29976.333Bos_taurus
ENSSMAG00000013779-8356.633WBGene00006697uaf-110053.741Caenorhabditis_elegans
ENSSMAG00000013779-10072.363ENSCJAG00000017128U2AF29975.105Callithrix_jacchus
ENSSMAG00000013779-10072.766ENSCAFG00000002551U2AF29975.532Canis_familiaris
ENSSMAG00000013779-8481.407ENSCAFG00020015445U2AF29575.165Canis_lupus_dingo
ENSSMAG00000013779-8468.329ENSCHIG00000023595U2AF28768.329Capra_hircus
ENSSMAG00000013779-10072.363ENSTSYG00000007432U2AF29975.105Carlito_syrichta
ENSSMAG00000013779-8679.657ENSCAPG00000008466U2AF29875.610Cavia_aperea
ENSSMAG00000013779-10072.363ENSCPOG00000001582U2AF29975.105Cavia_porcellus
ENSSMAG00000013779-10072.363ENSCCAG00000023336U2AF29975.105Cebus_capucinus
ENSSMAG00000013779-10072.766ENSCATG00000004637U2AF29975.532Cercocebus_atys
ENSSMAG00000013779-10072.766ENSCLAG00000000596U2AF29975.532Chinchilla_lanigera
ENSSMAG00000013779-10072.766ENSCSAG00000001722U2AF29975.532Chlorocebus_sabaeus
ENSSMAG00000013779-8779.036ENSCPBG00000004485U2AF29983.987Chrysemys_picta_bellii
ENSSMAG00000013779-8370.619ENSCING00000003455-8665.179Ciona_intestinalis
ENSSMAG00000013779-8367.949ENSCSAVG00000006813-9361.404Ciona_savignyi
ENSSMAG00000013779-10067.427ENSCANG00000043845-9970.763Colobus_angolensis_palliatus
ENSSMAG00000013779-9171.963ENSCANG00000031002-9675.000Colobus_angolensis_palliatus
ENSSMAG00000013779-10074.145ENSCGRG00001003185-9976.333Cricetulus_griseus_chok1gshd
ENSSMAG00000013779-10069.936ENSCGRG00001007486-9971.002Cricetulus_griseus_chok1gshd
ENSSMAG00000013779-10069.936ENSCGRG00000018587-9971.002Cricetulus_griseus_crigri
ENSSMAG00000013779-5180.913ENSCGRG00000004524-8278.261Cricetulus_griseus_crigri
ENSSMAG00000013779-10089.700ENSCSEG00000020504-9489.914Cynoglossus_semilaevis
ENSSMAG00000013779-6476.282ENSCSEG00000018709u2af2a9376.282Cynoglossus_semilaevis
ENSSMAG00000013779-10075.532ENSCVAG00000001259u2af2a9974.255Cyprinodon_variegatus
ENSSMAG00000013779-10095.708ENSCVAG00000023307-10095.708Cyprinodon_variegatus
ENSSMAG00000013779-10074.105ENSDARG00000011740u2af2b9974.105Danio_rerio
ENSSMAG00000013779-10071.429ENSDARG00000012505u2af2a9972.979Danio_rerio
ENSSMAG00000013779-9171.963ENSDNOG00000047039U2AF29675.000Dasypus_novemcinctus
ENSSMAG00000013779-10072.363ENSDORG00000003250U2af29975.105Dipodomys_ordii
ENSSMAG00000013779-8272.680FBgn0005411U2af5010072.826Drosophila_melanogaster
ENSSMAG00000013779-8253.598FBgn0034834LS28753.598Drosophila_melanogaster
ENSSMAG00000013779-8971.223ENSEBUG00000010917U2AF210066.456Eptatretus_burgeri
ENSSMAG00000013779-8763.325ENSEBUG00000001732U2AF29458.929Eptatretus_burgeri
ENSSMAG00000013779-8481.566ENSEASG00005020708U2AF28876.000Equus_asinus_asinus
ENSSMAG00000013779-10074.145ENSECAG00000010110U2AF29976.333Equus_caballus
ENSSMAG00000013779-10072.611ENSELUG00000022291u2af2b9972.128Esox_lucius
ENSSMAG00000013779-10072.141ENSELUG00000015850u2af2a9973.222Esox_lucius
ENSSMAG00000013779-10091.845ENSELUG00000018459-10091.845Esox_lucius
ENSSMAG00000013779-10072.363ENSFCAG00000011504U2AF29975.105Felis_catus
ENSSMAG00000013779-8679.657ENSFDAG00000011264U2AF29575.610Fukomys_damarensis
ENSSMAG00000013779-10074.580ENSFHEG00000016025u2af2a9973.830Fundulus_heteroclitus
ENSSMAG00000013779-10072.979ENSGMOG00000004535u2af2a9973.840Gadus_morhua
ENSSMAG00000013779-9873.478ENSGALG00000052748U2AF26576.139Gallus_gallus
ENSSMAG00000013779-10075.532ENSGAFG00000013626u2af2a8874.255Gambusia_affinis
ENSSMAG00000013779-10092.275ENSGAFG00000005628-10091.631Gambusia_affinis
ENSSMAG00000013779-10073.504ENSGACG00000010632U2AF29973.673Gasterosteus_aculeatus
ENSSMAG00000013779-10086.200ENSGACG00000014500-10086.804Gasterosteus_aculeatus
ENSSMAG00000013779-6583.987ENSGAGG00000011849U2AF29983.987Gopherus_agassizii
ENSSMAG00000013779-5574.609ENSGGOG00000036399-9674.609Gorilla_gorilla
ENSSMAG00000013779-10097.210ENSHBUG00000017424-10097.210Haplochromis_burtoni
ENSSMAG00000013779-10075.319ENSHBUG00000013935u2af2a9974.043Haplochromis_burtoni
ENSSMAG00000013779-10072.363ENSHGLG00000005889U2AF29975.105Heterocephalus_glaber_female
ENSSMAG00000013779-8679.657ENSHGLG00100004757U2AF29875.610Heterocephalus_glaber_male
ENSSMAG00000013779-10073.013ENSHCOG00000019367u2af2a9972.537Hippocampus_comes
ENSSMAG00000013779-10072.281ENSIPUG00000009077u2af29972.281Ictalurus_punctatus
ENSSMAG00000013779-10085.622ENSIPUG00000009844-10083.476Ictalurus_punctatus
ENSSMAG00000013779-10070.789ENSIPUG00000007717u2af2a9971.702Ictalurus_punctatus
ENSSMAG00000013779-10072.363ENSSTOG00000019595U2AF29975.105Ictidomys_tridecemlineatus
ENSSMAG00000013779-10072.363ENSJJAG00000017705U2af29975.105Jaculus_jaculus
ENSSMAG00000013779-10073.517ENSKMAG00000005960u2af2a9874.888Kryptolebias_marmoratus
ENSSMAG00000013779-9793.900ENSLBEG00000005001-9893.819Labrus_bergylta
ENSSMAG00000013779-10073.517ENSLBEG00000016162u2af2a9973.830Labrus_bergylta
ENSSMAG00000013779-7882.787ENSLACG00000001648U2AF29982.787Latimeria_chalumnae
ENSSMAG00000013779-10090.343ENSLOCG00000010843-10090.343Lepisosteus_oculatus
ENSSMAG00000013779-5982.609ENSLOCG00000008050u2af2b9173.112Lepisosteus_oculatus
ENSSMAG00000013779-10067.355ENSLAFG00000028496-9967.872Loxodonta_africana
ENSSMAG00000013779-10073.191ENSLAFG00000018056-9975.957Loxodonta_africana
ENSSMAG00000013779-10072.363ENSMFAG00000038383U2AF29975.105Macaca_fascicularis
ENSSMAG00000013779-10072.152ENSMMUG00000004810U2AF29974.895Macaca_mulatta
ENSSMAG00000013779-10072.766ENSMNEG00000042096U2AF29975.532Macaca_nemestrina
ENSSMAG00000013779-8680.198ENSMLEG00000032219U2AF28776.063Mandrillus_leucophaeus
ENSSMAG00000013779-10072.421ENSMAMG00000019817u2af2a9973.602Mastacembelus_armatus
ENSSMAG00000013779-10094.206ENSMAMG00000020158-10094.206Mastacembelus_armatus
ENSSMAG00000013779-10075.319ENSMZEG00005016563u2af2a9974.043Maylandia_zebra
ENSSMAG00000013779-10097.210ENSMZEG00005023318-10097.210Maylandia_zebra
ENSSMAG00000013779-8679.657ENSMAUG00000008180U2af29675.610Mesocricetus_auratus
ENSSMAG00000013779-10072.766ENSMICG00000027681U2AF29975.532Microcebus_murinus
ENSSMAG00000013779-6581.046ENSMOCG00000001018-9981.046Microtus_ochrogaster
ENSSMAG00000013779-10072.363ENSMOCG00000013214-9975.105Microtus_ochrogaster
ENSSMAG00000013779-10069.280ENSMOCG00000007227-9968.657Microtus_ochrogaster
ENSSMAG00000013779-10078.170ENSMMOG00000000531-10077.917Mola_mola
ENSSMAG00000013779-8182.632ENSMMOG00000016600u2af2a9975.000Mola_mola
ENSSMAG00000013779-10074.359ENSMALG00000009985u2af2a9974.681Monopterus_albus
ENSSMAG00000013779-10072.766MGP_CAROLIEiJ_G0029150U2af29975.532Mus_caroli
ENSSMAG00000013779-10072.766ENSMUSG00000030435U2af29983.987Mus_musculus
ENSSMAG00000013779-10072.766MGP_PahariEiJ_G0021017U2af29975.532Mus_pahari
ENSSMAG00000013779-10072.766MGP_SPRETEiJ_G0030203U2af29975.532Mus_spretus
ENSSMAG00000013779-10072.766ENSMPUG00000007135U2AF29975.532Mustela_putorius_furo
ENSSMAG00000013779-5079.583ENSMLUG00000011051-9979.583Myotis_lucifugus
ENSSMAG00000013779-10072.363ENSNGAG00000020369U2af29975.105Nannospalax_galili
ENSSMAG00000013779-9795.207ENSNBRG00000011100-9995.207Neolamprologus_brichardi
ENSSMAG00000013779-10075.319ENSNBRG00000002568u2af2a9974.043Neolamprologus_brichardi
ENSSMAG00000013779-10064.557ENSNLEG00000010562U2AF29983.987Nomascus_leucogenys
ENSSMAG00000013779-8669.059ENSMEUG00000002346U2AF29865.996Notamacropus_eugenii
ENSSMAG00000013779-9857.143ENSODEG00000009254-9956.710Octodon_degus
ENSSMAG00000013779-10067.300ENSODEG00000012729-9970.042Octodon_degus
ENSSMAG00000013779-10072.842ENSONIG00000012793u2af2a9973.941Oreochromis_niloticus
ENSSMAG00000013779-10097.210ENSONIG00000009682-10097.210Oreochromis_niloticus
ENSSMAG00000013779-10074.310ENSORLG00000011545u2af2a9973.987Oryzias_latipes
ENSSMAG00000013779-10074.310ENSORLG00020006941u2af2a9973.987Oryzias_latipes_hni
ENSSMAG00000013779-10074.310ENSORLG00015012843u2af2a9973.987Oryzias_latipes_hsok
ENSSMAG00000013779-10073.885ENSOMEG00000011386u2af2a9974.888Oryzias_melastigma
ENSSMAG00000013779-9249.891ENSOGAG00000034729-8154.499Otolemur_garnettii
ENSSMAG00000013779-10072.363ENSOGAG00000007206-9975.105Otolemur_garnettii
ENSSMAG00000013779-10066.599ENSOARG00000001091U2AF29967.775Ovis_aries
ENSSMAG00000013779-10072.363ENSPPAG00000039782U2AF29975.105Pan_paniscus
ENSSMAG00000013779-10072.363ENSPPRG00000013843U2AF29975.105Panthera_pardus
ENSSMAG00000013779-9968.376ENSPTIG00000005489U2AF28775.434Panthera_tigris_altaica
ENSSMAG00000013779-10072.363ENSPTRG00000011523U2AF29983.987Pan_troglodytes
ENSSMAG00000013779-10072.766ENSPANG00000008459U2AF29975.532Papio_anubis
ENSSMAG00000013779-10089.700ENSPKIG00000014878-10089.700Paramormyrops_kingsleyae
ENSSMAG00000013779-10071.855ENSPKIG00000024346u2af2b9973.602Paramormyrops_kingsleyae
ENSSMAG00000013779-8460.636ENSPSIG00000008014U2AF29857.792Pelodiscus_sinensis
ENSSMAG00000013779-8175.641ENSPMGG00000022980u2af2a9869.079Periophthalmus_magnuspinnatus
ENSSMAG00000013779-10072.363ENSPEMG00000007378U2af29983.987Peromyscus_maniculatus_bairdii
ENSSMAG00000013779-8177.865ENSPMAG00000004097u2af2a9872.627Petromyzon_marinus
ENSSMAG00000013779-10072.152ENSPCIG00000018013U2AF29974.895Phascolarctos_cinereus
ENSSMAG00000013779-10075.532ENSPFOG00000010799u2af2a10074.255Poecilia_formosa
ENSSMAG00000013779-10093.348ENSPFOG00000006433-10092.704Poecilia_formosa
ENSSMAG00000013779-10075.532ENSPLAG00000014365u2af2a9974.255Poecilia_latipinna
ENSSMAG00000013779-9493.364ENSPLAG00000003275-9792.342Poecilia_latipinna
ENSSMAG00000013779-10075.532ENSPMEG00000002969u2af2a9974.255Poecilia_mexicana
ENSSMAG00000013779-9492.906ENSPMEG00000003734-9791.892Poecilia_mexicana
ENSSMAG00000013779-10095.279ENSPREG00000013036-10095.890Poecilia_reticulata
ENSSMAG00000013779-10075.532ENSPREG00000008739u2af2a9974.255Poecilia_reticulata
ENSSMAG00000013779-5882.847ENSPPYG00000010429-7782.847Pongo_abelii
ENSSMAG00000013779-10058.316ENSPCAG00000014399-9961.053Procavia_capensis
ENSSMAG00000013779-8472.704ENSPCAG00000003709-9672.704Procavia_capensis
ENSSMAG00000013779-10072.363ENSPCOG00000025870U2AF29975.105Propithecus_coquereli
ENSSMAG00000013779-10072.152ENSPVAG00000004540U2AF29974.895Pteropus_vampyrus
ENSSMAG00000013779-10075.319ENSPNYG00000001438u2af2a9974.043Pundamilia_nyererei
ENSSMAG00000013779-10097.210ENSPNYG00000011605-10097.210Pundamilia_nyererei
ENSSMAG00000013779-10093.133ENSPNAG00000007182-10093.133Pygocentrus_nattereri
ENSSMAG00000013779-10071.610ENSPNAG00000017620u2af2a9972.034Pygocentrus_nattereri
ENSSMAG00000013779-10073.561ENSPNAG00000027289u2af2b9974.043Pygocentrus_nattereri
ENSSMAG00000013779-10072.766ENSRNOG00000015914U2af29975.532Rattus_norvegicus
ENSSMAG00000013779-10072.152ENSRBIG00000041018U2AF29974.895Rhinopithecus_bieti
ENSSMAG00000013779-7976.227ENSRROG00000031103-9975.245Rhinopithecus_roxellana
ENSSMAG00000013779-10070.488ENSRROG00000031238-9970.638Rhinopithecus_roxellana
ENSSMAG00000013779-10072.766ENSSBOG00000023891U2AF29975.532Saimiri_boliviensis_boliviensis
ENSSMAG00000013779-5170.671ENSSHAG00000001167U2AF28459.066Sarcophilus_harrisii
ENSSMAG00000013779-8481.061ENSSFOG00015019182u2af2b8981.061Scleropages_formosus
ENSSMAG00000013779-10090.129ENSSFOG00015003884-10090.129Scleropages_formosus
ENSSMAG00000013779-10075.319ENSSDUG00000009457u2af2a10074.043Seriola_dumerili
ENSSMAG00000013779-9795.228ENSSDUG00000021434-9495.228Seriola_dumerili
ENSSMAG00000013779-9795.228ENSSLDG00000016151-9995.228Seriola_lalandi_dorsalis
ENSSMAG00000013779-10075.319ENSSLDG00000022742u2af2a9974.043Seriola_lalandi_dorsalis
ENSSMAG00000013779-10071.639ENSSPUG00000010229U2AF29974.633Sphenodon_punctatus
ENSSMAG00000013779-10097.210ENSSPAG00000005241-10097.210Stegastes_partitus
ENSSMAG00000013779-10075.532ENSSPAG00000022519u2af2a9974.255Stegastes_partitus
ENSSMAG00000013779-10074.145ENSSSCG00000034815U2AF29976.333Sus_scrofa
ENSSMAG00000013779-8180.263ENSTRUG00000005514u2af2a9772.870Takifugu_rubripes
ENSSMAG00000013779-10086.538ENSTNIG00000011257-10088.034Tetraodon_nigroviridis
ENSSMAG00000013779-10073.932ENSTNIG00000008106U2AF29973.932Tetraodon_nigroviridis
ENSSMAG00000013779-7776.860ENSTBEG00000009104U2AF29777.871Tupaia_belangeri
ENSSMAG00000013779-10072.363ENSTTRG00000000987U2AF29975.105Tursiops_truncatus
ENSSMAG00000013779-8481.566ENSUAMG00000019883U2AF29975.166Ursus_americanus
ENSSMAG00000013779-8481.566ENSUMAG00000024586U2AF29983.987Ursus_maritimus
ENSSMAG00000013779-9775.551ENSVVUG00000006956U2AF26576.906Vulpes_vulpes
ENSSMAG00000013779-10074.004ENSXETG00000019128u2af29974.477Xenopus_tropicalis
ENSSMAG00000013779-8182.632ENSXCOG00000019406u2af2a9974.888Xiphophorus_couchianus
ENSSMAG00000013779-10075.532ENSXMAG00000011979u2af2a9974.255Xiphophorus_maculatus
ENSSMAG00000013779-10095.064ENSXMAG00000000768-9695.064Xiphophorus_maculatus

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