EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSSMAG00000013799 (Gene tree)
Gene ID: -
Gene Symbol: parp1
Alias: si:dkey-206f10.3|wu:fc60f12|zgc:110092
Full Name: poly (ADP-ribose) polymerase 1
Gene Type: protein_coding
Species: Scophthalmus_maximus
Status: putative
Strand: Plus strand
Length: 10104 bases
Position: chr20:11337061-11347164
Accession: ZDB-GENE-030131-3955
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSMAP00000022654	PARP	PF00644.20	6.5e-74	1	1
ENSSMAP00000022694	PARP	PF00644.20	2.4e-60	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSMAT00000022956	-	2967	-	ENSSMAP00000022694	988 (aa)	-	-
ENSSMAT00000022916	-	4371	-	ENSSMAP00000022654	1014 (aa)	-	A0A2U9CTP7

Gene Model

Click here to download ENSSMAG00000013799's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSMAG00000013799's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSMAG00000013799	parp1	100	70.772	ENSG00000143799	PARP1	100	70.772	Homo_sapiens
ENSSMAG00000013799	parp1	100	90.434	ENSAPOG00000006414	parp1	100	90.434	Acanthochromis_polyacanthus
ENSSMAG00000013799	parp1	99	69.504	ENSAMEG00000014451	PARP1	100	69.706	Ailuropoda_melanoleuca
ENSSMAG00000013799	parp1	100	89.941	ENSACIG00000005651	parp1	100	89.941	Amphilophus_citrinellus
ENSSMAG00000013799	parp1	100	91.519	ENSAOCG00000021005	parp1	100	91.519	Amphiprion_ocellaris
ENSSMAG00000013799	parp1	100	91.420	ENSAPEG00000004784	parp1	100	91.420	Amphiprion_percula
ENSSMAG00000013799	parp1	100	91.026	ENSATEG00000010457	parp1	100	91.026	Anabas_testudineus
ENSSMAG00000013799	parp1	87	72.851	ENSAPLG00000014039	PARP1	99	72.851	Anas_platyrhynchos
ENSSMAG00000013799	parp1	100	71.611	ENSACAG00000006189	PARP1	100	71.807	Anolis_carolinensis
ENSSMAG00000013799	parp1	100	70.497	ENSANAG00000032699	PARP1	100	70.772	Aotus_nancymaae
ENSSMAG00000013799	parp1	100	90.631	ENSACLG00000015489	parp1	100	90.631	Astatotilapia_calliptera
ENSSMAG00000013799	parp1	100	80.431	ENSAMXG00000006465	parp1	100	81.311	Astyanax_mexicanus
ENSSMAG00000013799	parp1	100	68.328	ENSBTAG00000000837	PARP1	100	68.622	Bos_taurus
ENSSMAG00000013799	parp1	84	42.629	WBGene00004049	parp-1	100	44.828	Caenorhabditis_elegans
ENSSMAG00000013799	parp1	100	70.302	ENSCJAG00000012831	PARP1	100	70.577	Callithrix_jacchus
ENSSMAG00000013799	parp1	96	68.814	ENSCAFG00000016089	PARP1	100	69.530	Canis_familiaris
ENSSMAG00000013799	parp1	100	69.833	ENSCAFG00020001660	PARP1	100	70.127	Canis_lupus_dingo
ENSSMAG00000013799	parp1	100	68.266	ENSCHIG00000018072	PARP1	100	68.817	Capra_hircus
ENSSMAG00000013799	parp1	91	71.537	ENSTSYG00000003699	PARP1	100	71.537	Carlito_syrichta
ENSSMAG00000013799	parp1	99	59.585	ENSCAPG00000011113	-	99	59.511	Cavia_aperea
ENSSMAG00000013799	parp1	100	70.341	ENSCPOG00000015643	-	100	70.341	Cavia_porcellus
ENSSMAG00000013799	parp1	100	70.968	ENSCCAG00000033484	PARP1	100	70.968	Cebus_capucinus
ENSSMAG00000013799	parp1	100	70.479	ENSCATG00000038981	PARP1	100	70.479	Cercocebus_atys
ENSSMAG00000013799	parp1	99	70.501	ENSCLAG00000006637	PARP1	99	70.501	Chinchilla_lanigera
ENSSMAG00000013799	parp1	66	77.344	ENSCHOG00000003539	PARP1	66	77.344	Choloepus_hoffmanni
ENSSMAG00000013799	parp1	99	73.176	ENSCPBG00000011958	PARP1	99	73.176	Chrysemys_picta_bellii
ENSSMAG00000013799	parp1	98	68.900	ENSCANG00000041340	PARP1	100	69.857	Colobus_angolensis_palliatus
ENSSMAG00000013799	parp1	100	70.098	ENSCGRG00001020559	Parp1	100	70.196	Cricetulus_griseus_chok1gshd
ENSSMAG00000013799	parp1	99	69.867	ENSCGRG00000004864	Parp1	100	69.969	Cricetulus_griseus_crigri
ENSSMAG00000013799	parp1	100	91.549	ENSCSEG00000020665	parp1	99	91.549	Cynoglossus_semilaevis
ENSSMAG00000013799	parp1	99	87.935	ENSCVAG00000021372	parp1	99	87.935	Cyprinodon_variegatus
ENSSMAG00000013799	parp1	100	83.202	ENSDARG00000019529	parp1	100	82.596	Danio_rerio
ENSSMAG00000013799	parp1	99	68.475	ENSDNOG00000012059	PARP1	100	69.191	Dasypus_novemcinctus
ENSSMAG00000013799	parp1	99	68.335	ENSDORG00000005234	Parp1	100	68.846	Dipodomys_ordii
ENSSMAG00000013799	parp1	99	42.100	FBgn0010247	Parp	99	41.708	Drosophila_melanogaster
ENSSMAG00000013799	parp1	87	77.344	ENSETEG00000013254	PARP1	88	77.344	Echinops_telfairi
ENSSMAG00000013799	parp1	97	58.853	ENSEBUG00000005820	parp1	100	58.818	Eptatretus_burgeri
ENSSMAG00000013799	parp1	98	69.851	ENSEASG00005013275	PARP1	99	70.746	Equus_asinus_asinus
ENSSMAG00000013799	parp1	100	69.990	ENSECAG00000019207	PARP1	100	70.772	Equus_caballus
ENSSMAG00000013799	parp1	99	67.158	ENSEEUG00000012253	PARP1	99	67.552	Erinaceus_europaeus
ENSSMAG00000013799	parp1	99	85.475	ENSELUG00000017336	parp1	99	85.475	Esox_lucius
ENSSMAG00000013799	parp1	97	69.433	ENSFCAG00000005777	PARP1	100	69.939	Felis_catus
ENSSMAG00000013799	parp1	99	73.006	ENSFALG00000011578	PARP1	100	73.722	Ficedula_albicollis
ENSSMAG00000013799	parp1	99	68.966	ENSFDAG00000017662	PARP1	100	68.966	Fukomys_damarensis
ENSSMAG00000013799	parp1	100	89.163	ENSFHEG00000001117	parp1	100	89.163	Fundulus_heteroclitus
ENSSMAG00000013799	parp1	99	83.677	ENSGMOG00000014929	parp1	100	83.677	Gadus_morhua
ENSSMAG00000013799	parp1	99	73.741	ENSGALG00000009228	PARP1	99	74.334	Gallus_gallus
ENSSMAG00000013799	parp1	100	88.571	ENSGAFG00000010450	parp1	100	88.571	Gambusia_affinis
ENSSMAG00000013799	parp1	100	89.961	ENSGACG00000011280	parp1	100	89.961	Gasterosteus_aculeatus
ENSSMAG00000013799	parp1	99	72.530	ENSGAGG00000010066	PARP1	99	72.853	Gopherus_agassizii
ENSSMAG00000013799	parp1	100	70.479	ENSGGOG00000006308	PARP1	100	70.479	Gorilla_gorilla
ENSSMAG00000013799	parp1	100	91.716	ENSHBUG00000010490	parp1	100	91.716	Haplochromis_burtoni
ENSSMAG00000013799	parp1	96	69.074	ENSHGLG00000003992	PARP1	93	69.074	Heterocephalus_glaber_female
ENSSMAG00000013799	parp1	96	69.074	ENSHGLG00100016965	PARP1	93	69.074	Heterocephalus_glaber_male
ENSSMAG00000013799	parp1	100	87.353	ENSHCOG00000011619	parp1	100	87.843	Hippocampus_comes
ENSSMAG00000013799	parp1	100	81.348	ENSIPUG00000020250	parp1	100	81.561	Ictalurus_punctatus
ENSSMAG00000013799	parp1	100	70.577	ENSSTOG00000016000	PARP1	100	70.577	Ictidomys_tridecemlineatus
ENSSMAG00000013799	parp1	100	69.804	ENSJJAG00000023497	Parp1	100	70.490	Jaculus_jaculus
ENSSMAG00000013799	parp1	100	89.064	ENSKMAG00000011627	parp1	100	89.261	Kryptolebias_marmoratus
ENSSMAG00000013799	parp1	100	92.012	ENSLBEG00000013376	parp1	100	92.012	Labrus_bergylta
ENSSMAG00000013799	parp1	99	57.129	ENSLACG00000002735	PARP1	99	57.367	Latimeria_chalumnae
ENSSMAG00000013799	parp1	100	79.351	ENSLOCG00000015798	parp1	100	80.039	Lepisosteus_oculatus
ENSSMAG00000013799	parp1	99	68.673	ENSLAFG00000007830	PARP1	100	69.286	Loxodonta_africana
ENSSMAG00000013799	parp1	100	70.381	ENSMFAG00000002526	PARP1	100	70.381	Macaca_fascicularis
ENSSMAG00000013799	parp1	100	70.479	ENSMMUG00000021820	PARP1	100	70.479	Macaca_mulatta
ENSSMAG00000013799	parp1	100	70.381	ENSMNEG00000034074	PARP1	100	70.381	Macaca_nemestrina
ENSSMAG00000013799	parp1	100	68.616	ENSMLEG00000012344	PARP1	100	68.616	Mandrillus_leucophaeus
ENSSMAG00000013799	parp1	100	92.308	ENSMAMG00000020652	parp1	100	92.308	Mastacembelus_armatus
ENSSMAG00000013799	parp1	100	92.012	ENSMZEG00005016907	parp1	100	92.012	Maylandia_zebra
ENSSMAG00000013799	parp1	99	73.695	ENSMGAG00000007760	PARP1	100	73.797	Meleagris_gallopavo
ENSSMAG00000013799	parp1	100	69.804	ENSMAUG00000008306	Parp1	100	69.902	Mesocricetus_auratus
ENSSMAG00000013799	parp1	100	67.822	ENSMICG00000017076	PARP1	100	67.822	Microcebus_murinus
ENSSMAG00000013799	parp1	100	70.000	ENSMOCG00000014315	Parp1	100	70.098	Microtus_ochrogaster
ENSSMAG00000013799	parp1	100	89.892	ENSMMOG00000015966	parp1	100	89.892	Mola_mola
ENSSMAG00000013799	parp1	100	69.902	ENSMODG00000006076	PARP1	100	70.098	Monodelphis_domestica
ENSSMAG00000013799	parp1	100	87.771	ENSMALG00000004057	parp1	100	87.771	Monopterus_albus
ENSSMAG00000013799	parp1	100	69.833	MGP_CAROLIEiJ_G0014978	Parp1	100	75.510	Mus_caroli
ENSSMAG00000013799	parp1	100	69.833	ENSMUSG00000026496	Parp1	99	75.510	Mus_musculus
ENSSMAG00000013799	parp1	100	69.833	MGP_SPRETEiJ_G0015777	Parp1	100	75.510	Mus_spretus
ENSSMAG00000013799	parp1	100	70.127	ENSMPUG00000004585	PARP1	100	70.029	Mustela_putorius_furo
ENSSMAG00000013799	parp1	90	59.739	ENSMLUG00000012285	PARP1	85	76.047	Myotis_lucifugus
ENSSMAG00000013799	parp1	99	69.980	ENSNGAG00000003885	Parp1	99	70.020	Nannospalax_galili
ENSSMAG00000013799	parp1	100	90.434	ENSNBRG00000017434	parp1	100	90.434	Neolamprologus_brichardi
ENSSMAG00000013799	parp1	95	75.448	ENSNLEG00000013905	PARP1	100	75.448	Nomascus_leucogenys
ENSSMAG00000013799	parp1	67	78.507	ENSMEUG00000007720	PARP1	87	78.507	Notamacropus_eugenii
ENSSMAG00000013799	parp1	100	71.457	ENSOPRG00000011722	PARP1	100	72.141	Ochotona_princeps
ENSSMAG00000013799	parp1	100	69.374	ENSODEG00000007424	PARP1	100	69.569	Octodon_degus
ENSSMAG00000013799	parp1	100	91.420	ENSONIG00000013486	parp1	100	91.420	Oreochromis_niloticus
ENSSMAG00000013799	parp1	99	71.604	ENSOANG00000001488	PARP1	100	71.706	Ornithorhynchus_anatinus
ENSSMAG00000013799	parp1	100	70.870	ENSOCUG00000017820	PARP1	100	71.554	Oryctolagus_cuniculus
ENSSMAG00000013799	parp1	100	87.685	ENSORLG00000013691	parp1	100	87.685	Oryzias_latipes
ENSSMAG00000013799	parp1	99	87.475	ENSORLG00020001074	parp1	99	87.475	Oryzias_latipes_hni
ENSSMAG00000013799	parp1	100	87.882	ENSORLG00015007090	parp1	100	87.882	Oryzias_latipes_hsok
ENSSMAG00000013799	parp1	100	70.617	ENSOGAG00000016206	PARP1	100	70.617	Otolemur_garnettii
ENSSMAG00000013799	parp1	100	68.328	ENSOARG00000000811	PARP1	100	69.013	Ovis_aries
ENSSMAG00000013799	parp1	100	70.381	ENSPPAG00000040862	PARP1	100	70.381	Pan_paniscus
ENSSMAG00000013799	parp1	96	69.246	ENSPPRG00000003528	PARP1	100	69.552	Panthera_pardus
ENSSMAG00000013799	parp1	93	58.867	ENSPTIG00000009102	PARP1	98	58.675	Panthera_tigris_altaica
ENSSMAG00000013799	parp1	100	70.381	ENSPTRG00000002049	PARP1	100	70.381	Pan_troglodytes
ENSSMAG00000013799	parp1	100	70.508	ENSPANG00000011198	PARP1	100	70.508	Papio_anubis
ENSSMAG00000013799	parp1	100	81.988	ENSPKIG00000006039	parp1	100	82.185	Paramormyrops_kingsleyae
ENSSMAG00000013799	parp1	99	71.792	ENSPSIG00000016374	PARP1	100	71.894	Pelodiscus_sinensis
ENSSMAG00000013799	parp1	100	83.497	ENSPMGG00000008936	parp1	100	83.497	Periophthalmus_magnuspinnatus
ENSSMAG00000013799	parp1	100	70.352	ENSPEMG00000020230	Parp1	100	70.352	Peromyscus_maniculatus_bairdii
ENSSMAG00000013799	parp1	99	69.852	ENSPCIG00000006436	PARP1	99	70.739	Phascolarctos_cinereus
ENSSMAG00000013799	parp1	100	87.488	ENSPFOG00000002342	parp1	100	87.488	Poecilia_formosa
ENSSMAG00000013799	parp1	100	88.867	ENSPLAG00000000909	parp1	100	88.867	Poecilia_latipinna
ENSSMAG00000013799	parp1	100	89.360	ENSPMEG00000013979	parp1	100	89.360	Poecilia_mexicana
ENSSMAG00000013799	parp1	100	88.670	ENSPREG00000001114	parp1	100	88.670	Poecilia_reticulata
ENSSMAG00000013799	parp1	99	70.204	ENSPPYG00000000164	PARP1	100	70.204	Pongo_abelii
ENSSMAG00000013799	parp1	60	78.086	ENSPCAG00000005558	-	59	78.086	Procavia_capensis
ENSSMAG00000013799	parp1	100	69.931	ENSPCOG00000016918	PARP1	100	70.244	Propithecus_coquereli
ENSSMAG00000013799	parp1	92	80.488	ENSPVAG00000005543	PARP1	86	80.488	Pteropus_vampyrus
ENSSMAG00000013799	parp1	100	90.631	ENSPNYG00000009702	parp1	100	90.631	Pundamilia_nyererei
ENSSMAG00000013799	parp1	100	82.877	ENSPNAG00000002787	parp1	100	83.562	Pygocentrus_nattereri
ENSSMAG00000013799	parp1	100	69.931	ENSRNOG00000003084	Parp1	100	69.931	Rattus_norvegicus
ENSSMAG00000013799	parp1	100	70.381	ENSRBIG00000044893	PARP1	100	70.381	Rhinopithecus_bieti
ENSSMAG00000013799	parp1	99	52.118	ENSRROG00000040615	-	97	58.961	Rhinopithecus_roxellana
ENSSMAG00000013799	parp1	100	70.381	ENSRROG00000029280	PARP1	100	70.381	Rhinopithecus_roxellana
ENSSMAG00000013799	parp1	100	70.479	ENSSBOG00000010144	PARP1	100	71.261	Saimiri_boliviensis_boliviensis
ENSSMAG00000013799	parp1	99	69.836	ENSSHAG00000001991	PARP1	100	70.552	Sarcophilus_harrisii
ENSSMAG00000013799	parp1	100	82.014	ENSSFOG00015020017	parp1	100	82.014	Scleropages_formosus
ENSSMAG00000013799	parp1	100	94.083	ENSSDUG00000016626	parp1	100	94.083	Seriola_dumerili
ENSSMAG00000013799	parp1	100	94.083	ENSSLDG00000006384	parp1	100	94.083	Seriola_lalandi_dorsalis
ENSSMAG00000013799	parp1	53	76.620	ENSSARG00000009436	-	59	76.620	Sorex_araneus
ENSSMAG00000013799	parp1	100	68.838	ENSSPUG00000007790	PARP1	100	69.138	Sphenodon_punctatus
ENSSMAG00000013799	parp1	100	88.645	ENSSPAG00000019074	parp1	100	91.819	Stegastes_partitus
ENSSMAG00000013799	parp1	100	70.059	ENSSSCG00000023660	PARP1	100	70.646	Sus_scrofa
ENSSMAG00000013799	parp1	98	71.982	ENSTGUG00000004260	-	100	72.536	Taeniopygia_guttata
ENSSMAG00000013799	parp1	100	87.475	ENSTRUG00000014490	parp1	100	87.475	Takifugu_rubripes
ENSSMAG00000013799	parp1	100	86.399	ENSTNIG00000016384	parp1	100	86.399	Tetraodon_nigroviridis
ENSSMAG00000013799	parp1	84	76.877	ENSTBEG00000002364	PARP1	92	76.471	Tupaia_belangeri
ENSSMAG00000013799	parp1	100	65.005	ENSTTRG00000000188	PARP1	100	65.885	Tursiops_truncatus
ENSSMAG00000013799	parp1	96	69.929	ENSUAMG00000014388	PARP1	100	70.133	Ursus_americanus
ENSSMAG00000013799	parp1	96	62.767	ENSUMAG00000014555	PARP1	99	63.276	Ursus_maritimus
ENSSMAG00000013799	parp1	83	77.647	ENSVPAG00000011411	PARP1	83	77.647	Vicugna_pacos
ENSSMAG00000013799	parp1	96	68.712	ENSVVUG00000001655	PARP1	100	69.145	Vulpes_vulpes
ENSSMAG00000013799	parp1	98	70.600	ENSXETG00000022610	parp1	99	70.109	Xenopus_tropicalis
ENSSMAG00000013799	parp1	100	88.177	ENSXMAG00000003632	parp1	100	88.177	Xiphophorus_maculatus