EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSSMAG00000013828 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Scophthalmus_maximus
Status: putative
Strand: Minus strand
Length: 2399 bases
Position: chr18:21331773-21334171
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSMAP00000022631	zf-C2H2	PF00096.26	6.7e-51	1	10
ENSSMAP00000022631	zf-C2H2	PF00096.26	6.7e-51	2	10
ENSSMAP00000022631	zf-C2H2	PF00096.26	6.7e-51	3	10
ENSSMAP00000022631	zf-C2H2	PF00096.26	6.7e-51	4	10
ENSSMAP00000022631	zf-C2H2	PF00096.26	6.7e-51	5	10
ENSSMAP00000022631	zf-C2H2	PF00096.26	6.7e-51	6	10
ENSSMAP00000022631	zf-C2H2	PF00096.26	6.7e-51	7	10
ENSSMAP00000022631	zf-C2H2	PF00096.26	6.7e-51	8	10
ENSSMAP00000022631	zf-C2H2	PF00096.26	6.7e-51	9	10
ENSSMAP00000022631	zf-C2H2	PF00096.26	6.7e-51	10	10
ENSSMAP00000022631	zf-met	PF12874.7	6.4e-19	1	2
ENSSMAP00000022631	zf-met	PF12874.7	6.4e-19	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSMAT00000022893	-	1995	-	ENSSMAP00000022631	504 (aa)	-	-

Gene Model

Click here to download ENSSMAG00000013828's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSMAG00000013828's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSSMAG00000013828	-	62	38.065	ENSSMAG00000009020	znf526	59	37.500
ENSSMAG00000013828	-	74	44.828	ENSSMAG00000004259	-	70	44.828
ENSSMAG00000013828	-	61	41.772	ENSSMAG00000004252	-	85	41.772
ENSSMAG00000013828	-	55	38.667	ENSSMAG00000003204	zgc:171929	55	45.652
ENSSMAG00000013828	-	70	46.491	ENSSMAG00000009685	-	86	45.714
ENSSMAG00000013828	-	63	37.805	ENSSMAG00000001359	-	88	37.805
ENSSMAG00000013828	-	60	50.495	ENSSMAG00000009609	-	97	50.495
ENSSMAG00000013828	-	68	37.931	ENSSMAG00000008907	zbtb41	64	37.931
ENSSMAG00000013828	-	71	46.951	ENSSMAG00000021251	-	97	46.789
ENSSMAG00000013828	-	63	53.333	ENSSMAG00000013663	-	91	53.333
ENSSMAG00000013828	-	68	45.714	ENSSMAG00000006155	-	79	45.714
ENSSMAG00000013828	-	76	45.283	ENSSMAG00000019980	-	72	39.752
ENSSMAG00000013828	-	60	37.278	ENSSMAG00000000404	-	52	37.278
ENSSMAG00000013828	-	60	38.583	ENSSMAG00000018844	prdm5	73	38.583
ENSSMAG00000013828	-	60	36.190	ENSSMAG00000019364	snai2	52	36.190
ENSSMAG00000013828	-	73	36.567	ENSSMAG00000019207	scrt1b	51	36.567
ENSSMAG00000013828	-	60	44.444	ENSSMAG00000013291	-	94	43.684
ENSSMAG00000013828	-	60	36.184	ENSSMAG00000014597	-	58	37.023
ENSSMAG00000013828	-	65	44.843	ENSSMAG00000005076	-	99	47.500
ENSSMAG00000013828	-	72	46.222	ENSSMAG00000006197	-	98	46.222
ENSSMAG00000013828	-	74	44.934	ENSSMAG00000009115	-	94	55.769
ENSSMAG00000013828	-	61	45.550	ENSSMAG00000015356	-	76	45.550
ENSSMAG00000013828	-	60	38.889	ENSSMAG00000020844	patz1	56	34.884
ENSSMAG00000013828	-	61	44.079	ENSSMAG00000007396	-	80	44.079
ENSSMAG00000013828	-	63	40.252	ENSSMAG00000017501	-	57	40.252
ENSSMAG00000013828	-	65	30.877	ENSSMAG00000008308	-	77	30.877
ENSSMAG00000013828	-	63	45.833	ENSSMAG00000007561	znf236	64	38.961
ENSSMAG00000013828	-	63	37.770	ENSSMAG00000002391	ZNF319	97	37.770
ENSSMAG00000013828	-	64	43.005	ENSSMAG00000006825	-	86	43.005
ENSSMAG00000013828	-	63	46.667	ENSSMAG00000003594	-	82	46.058
ENSSMAG00000013828	-	60	43.426	ENSSMAG00000015282	-	74	43.426
ENSSMAG00000013828	-	84	41.176	ENSSMAG00000015041	si:dkey-7i4.5	92	41.057
ENSSMAG00000013828	-	70	46.667	ENSSMAG00000017045	-	64	46.667
ENSSMAG00000013828	-	98	41.818	ENSSMAG00000019949	-	95	41.818
ENSSMAG00000013828	-	69	39.604	ENSSMAG00000013652	snai1a	60	39.604
ENSSMAG00000013828	-	86	39.590	ENSSMAG00000014864	-	97	39.590
ENSSMAG00000013828	-	61	35.606	ENSSMAG00000015849	znf319b	86	36.254
ENSSMAG00000013828	-	64	44.025	ENSSMAG00000015181	gfi1b	62	44.025
ENSSMAG00000013828	-	61	41.196	ENSSMAG00000000183	-	55	38.489
ENSSMAG00000013828	-	60	42.857	ENSSMAG00000004429	-	88	42.857
ENSSMAG00000013828	-	69	37.736	ENSSMAG00000021271	-	67	37.736
ENSSMAG00000013828	-	60	51.485	ENSSMAG00000014844	-	67	51.232
ENSSMAG00000013828	-	62	36.301	ENSSMAG00000008834	-	53	36.301
ENSSMAG00000013828	-	60	51.250	ENSSMAG00000009679	-	80	51.250
ENSSMAG00000013828	-	95	39.382	ENSSMAG00000013676	-	99	38.039
ENSSMAG00000013828	-	62	40.741	ENSSMAG00000012378	znf646	71	31.154
ENSSMAG00000013828	-	61	45.487	ENSSMAG00000015347	-	82	45.487
ENSSMAG00000013828	-	60	41.026	ENSSMAG00000001190	PRDM15	54	41.026
ENSSMAG00000013828	-	62	42.174	ENSSMAG00000005081	-	84	38.793

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSMAG00000013828	-	100	71.373	ENSAPOG00000023008	-	100	71.373	Acanthochromis_polyacanthus
ENSSMAG00000013828	-	59	47.500	ENSAPOG00000004997	-	93	47.500	Acanthochromis_polyacanthus
ENSSMAG00000013828	-	60	45.794	ENSAPOG00000009709	-	97	45.794	Acanthochromis_polyacanthus
ENSSMAG00000013828	-	60	48.980	ENSAPOG00000022184	-	99	48.980	Acanthochromis_polyacanthus
ENSSMAG00000013828	-	100	65.326	ENSACIG00000022738	-	100	65.326	Amphilophus_citrinellus
ENSSMAG00000013828	-	65	43.443	ENSACIG00000006228	-	81	46.364	Amphilophus_citrinellus
ENSSMAG00000013828	-	60	45.455	ENSACIG00000007096	-	81	45.455	Amphilophus_citrinellus
ENSSMAG00000013828	-	100	72.340	ENSAOCG00000016409	-	100	72.340	Amphiprion_ocellaris
ENSSMAG00000013828	-	100	72.147	ENSAPEG00000008746	-	99	72.147	Amphiprion_percula
ENSSMAG00000013828	-	60	42.929	ENSAPEG00000009553	-	52	40.606	Amphiprion_percula
ENSSMAG00000013828	-	75	47.143	ENSATEG00000022064	-	99	43.807	Anabas_testudineus
ENSSMAG00000013828	-	100	77.692	ENSATEG00000015238	-	100	77.692	Anabas_testudineus
ENSSMAG00000013828	-	64	48.000	ENSATEG00000014684	-	96	43.662	Anabas_testudineus
ENSSMAG00000013828	-	60	45.985	ENSATEG00000021602	-	67	45.985	Anabas_testudineus
ENSSMAG00000013828	-	62	46.324	ENSACLG00000022482	-	79	46.324	Astatotilapia_calliptera
ENSSMAG00000013828	-	60	46.281	ENSACLG00000014365	-	93	43.367	Astatotilapia_calliptera
ENSSMAG00000013828	-	60	45.833	ENSACLG00000019482	-	83	45.833	Astatotilapia_calliptera
ENSSMAG00000013828	-	60	47.879	ENSACLG00000005795	-	59	47.879	Astatotilapia_calliptera
ENSSMAG00000013828	-	100	70.437	ENSACLG00000015462	-	100	70.437	Astatotilapia_calliptera
ENSSMAG00000013828	-	60	48.592	ENSACLG00000006718	-	56	48.592	Astatotilapia_calliptera
ENSSMAG00000013828	-	60	50.370	ENSACLG00000018716	-	72	50.370	Astatotilapia_calliptera
ENSSMAG00000013828	-	66	44.767	ENSACLG00000019349	-	68	44.767	Astatotilapia_calliptera
ENSSMAG00000013828	-	60	47.716	ENSACLG00000011239	-	70	47.716	Astatotilapia_calliptera
ENSSMAG00000013828	-	61	40.191	ENSACLG00000001368	-	90	40.571	Astatotilapia_calliptera
ENSSMAG00000013828	-	60	48.592	ENSACLG00000020333	-	56	48.592	Astatotilapia_calliptera
ENSSMAG00000013828	-	60	39.496	ENSAMXG00000034934	-	84	39.496	Astyanax_mexicanus
ENSSMAG00000013828	-	60	48.598	ENSAMXG00000007973	-	91	47.297	Astyanax_mexicanus
ENSSMAG00000013828	-	60	40.777	ENSCSEG00000019848	-	64	42.331	Cynoglossus_semilaevis
ENSSMAG00000013828	-	63	40.909	ENSCSEG00000019599	-	67	40.909	Cynoglossus_semilaevis
ENSSMAG00000013828	-	100	63.725	ENSCVAG00000019097	-	99	63.922	Cyprinodon_variegatus
ENSSMAG00000013828	-	60	42.132	ENSCVAG00000020968	-	57	38.384	Cyprinodon_variegatus
ENSSMAG00000013828	-	60	50.000	ENSCVAG00000010887	-	51	50.000	Cyprinodon_variegatus
ENSSMAG00000013828	-	61	45.652	ENSDARG00000102282	CABZ01063298.1	88	45.652	Danio_rerio
ENSSMAG00000013828	-	61	45.652	ENSDARG00000079760	zgc:112998	85	45.652	Danio_rerio
ENSSMAG00000013828	-	100	59.510	ENSELUG00000004677	-	99	59.510	Esox_lucius
ENSSMAG00000013828	-	100	66.863	ENSFHEG00000003460	-	100	66.863	Fundulus_heteroclitus
ENSSMAG00000013828	-	60	55.738	ENSGMOG00000017518	-	63	55.738	Gadus_morhua
ENSSMAG00000013828	-	89	60.938	ENSGMOG00000009187	ZNF626	99	60.938	Gadus_morhua
ENSSMAG00000013828	-	60	44.068	ENSGAFG00000007532	-	73	44.068	Gambusia_affinis
ENSSMAG00000013828	-	88	69.283	ENSGAFG00000001481	-	100	69.283	Gambusia_affinis
ENSSMAG00000013828	-	60	48.387	ENSGAGG00000015232	-	70	48.387	Gopherus_agassizii
ENSSMAG00000013828	-	60	41.463	ENSHBUG00000020527	-	90	41.463	Haplochromis_burtoni
ENSSMAG00000013828	-	60	43.678	ENSHBUG00000009274	-	91	43.678	Haplochromis_burtoni
ENSSMAG00000013828	-	60	45.399	ENSHBUG00000011944	-	57	45.399	Haplochromis_burtoni
ENSSMAG00000013828	-	60	48.305	ENSHBUG00000017251	-	100	45.299	Haplochromis_burtoni
ENSSMAG00000013828	-	100	70.635	ENSHBUG00000019377	-	100	70.635	Haplochromis_burtoni
ENSSMAG00000013828	-	60	47.879	ENSHBUG00000013065	-	53	47.879	Haplochromis_burtoni
ENSSMAG00000013828	-	60	44.286	ENSHBUG00000020544	-	91	44.286	Haplochromis_burtoni
ENSSMAG00000013828	-	100	53.179	ENSIPUG00000022266	ZNF135	99	53.179	Ictalurus_punctatus
ENSSMAG00000013828	-	100	73.386	ENSKMAG00000015304	-	100	73.190	Kryptolebias_marmoratus
ENSSMAG00000013828	-	60	48.148	ENSKMAG00000000802	-	74	48.148	Kryptolebias_marmoratus
ENSSMAG00000013828	-	61	46.237	ENSLBEG00000008909	-	74	46.237	Labrus_bergylta
ENSSMAG00000013828	-	61	47.222	ENSLBEG00000009663	-	52	47.222	Labrus_bergylta
ENSSMAG00000013828	-	60	46.250	ENSLBEG00000008850	-	53	46.250	Labrus_bergylta
ENSSMAG00000013828	-	64	42.273	ENSLBEG00000026457	-	95	45.714	Labrus_bergylta
ENSSMAG00000013828	-	60	44.292	ENSLOCG00000017422	-	69	44.292	Lepisosteus_oculatus
ENSSMAG00000013828	-	60	46.226	ENSMAMG00000002083	-	94	38.739	Mastacembelus_armatus
ENSSMAG00000013828	-	60	50.000	ENSMAMG00000015434	-	68	50.000	Mastacembelus_armatus
ENSSMAG00000013828	-	99	77.264	ENSMAMG00000010902	-	98	77.264	Mastacembelus_armatus
ENSSMAG00000013828	-	63	39.865	ENSMZEG00005003951	-	77	39.865	Maylandia_zebra
ENSSMAG00000013828	-	60	41.899	ENSMZEG00005025725	-	96	43.836	Maylandia_zebra
ENSSMAG00000013828	-	61	43.182	ENSMZEG00005027551	-	91	42.500	Maylandia_zebra
ENSSMAG00000013828	-	60	46.012	ENSMZEG00005025965	-	60	46.012	Maylandia_zebra
ENSSMAG00000013828	-	60	42.000	ENSMZEG00005028563	-	84	41.036	Maylandia_zebra
ENSSMAG00000013828	-	60	47.879	ENSMZEG00005011812	-	53	47.879	Maylandia_zebra
ENSSMAG00000013828	-	66	41.951	ENSMZEG00005025006	-	89	43.750	Maylandia_zebra
ENSSMAG00000013828	-	60	52.000	ENSMZEG00005023565	-	86	52.000	Maylandia_zebra
ENSSMAG00000013828	-	60	41.209	ENSMZEG00005025125	-	95	41.209	Maylandia_zebra
ENSSMAG00000013828	-	100	70.437	ENSMZEG00005018502	-	100	70.437	Maylandia_zebra
ENSSMAG00000013828	-	62	50.000	ENSMZEG00005022884	-	100	50.000	Maylandia_zebra
ENSSMAG00000013828	-	60	45.291	ENSMZEG00005012676	-	89	45.291	Maylandia_zebra
ENSSMAG00000013828	-	77	44.220	ENSMZEG00005020568	-	84	50.800	Maylandia_zebra
ENSSMAG00000013828	-	64	47.794	ENSMZEG00005011431	-	98	44.643	Maylandia_zebra
ENSSMAG00000013828	-	100	67.641	ENSMMOG00000009252	-	100	67.723	Mola_mola
ENSSMAG00000013828	-	100	72.500	ENSMALG00000011756	-	100	72.692	Monopterus_albus
ENSSMAG00000013828	-	60	49.367	ENSMALG00000010959	-	83	46.862	Monopterus_albus
ENSSMAG00000013828	-	61	46.154	ENSMALG00000002956	-	79	46.154	Monopterus_albus
ENSSMAG00000013828	-	100	70.635	ENSNBRG00000024179	-	100	70.635	Neolamprologus_brichardi
ENSSMAG00000013828	-	60	46.324	ENSNBRG00000004792	-	50	46.324	Neolamprologus_brichardi
ENSSMAG00000013828	-	60	49.057	ENSNBRG00000016639	-	53	49.057	Neolamprologus_brichardi
ENSSMAG00000013828	-	60	42.697	ENSNBRG00000004723	-	88	42.077	Neolamprologus_brichardi
ENSSMAG00000013828	-	60	47.727	ENSNBRG00000019004	-	62	47.727	Neolamprologus_brichardi
ENSSMAG00000013828	-	60	70.863	ENSONIG00000019139	-	100	70.863	Oreochromis_niloticus
ENSSMAG00000013828	-	60	43.868	ENSONIG00000001986	-	96	44.583	Oreochromis_niloticus
ENSSMAG00000013828	-	65	43.678	ENSONIG00000014012	-	91	43.678	Oreochromis_niloticus
ENSSMAG00000013828	-	60	53.448	ENSONIG00000015024	-	81	53.448	Oreochromis_niloticus
ENSSMAG00000013828	-	60	51.724	ENSONIG00000008297	-	93	51.724	Oreochromis_niloticus
ENSSMAG00000013828	-	60	46.693	ENSONIG00000020667	-	99	46.693	Oreochromis_niloticus
ENSSMAG00000013828	-	60	50.685	ENSONIG00000012374	-	98	42.908	Oreochromis_niloticus
ENSSMAG00000013828	-	76	44.318	ENSORLG00000012581	-	98	44.318	Oryzias_latipes
ENSSMAG00000013828	-	100	65.347	ENSOMEG00000015179	-	100	64.950	Oryzias_melastigma
ENSSMAG00000013828	-	69	42.193	ENSPKIG00000015951	-	68	42.193	Paramormyrops_kingsleyae
ENSSMAG00000013828	-	61	43.350	ENSPMGG00000008518	-	98	43.350	Periophthalmus_magnuspinnatus
ENSSMAG00000013828	-	60	39.815	ENSPMGG00000020606	-	98	39.815	Periophthalmus_magnuspinnatus
ENSSMAG00000013828	-	100	64.854	ENSPFOG00000000667	-	100	64.854	Poecilia_formosa
ENSSMAG00000013828	-	63	48.000	ENSPFOG00000018771	-	62	47.312	Poecilia_formosa
ENSSMAG00000013828	-	65	48.889	ENSPLAG00000005106	-	73	48.889	Poecilia_latipinna
ENSSMAG00000013828	-	100	61.896	ENSPLAG00000013745	-	100	67.416	Poecilia_latipinna
ENSSMAG00000013828	-	61	42.063	ENSPMEG00000020864	-	96	42.063	Poecilia_mexicana
ENSSMAG00000013828	-	64	44.800	ENSPMEG00000022651	-	61	46.250	Poecilia_mexicana
ENSSMAG00000013828	-	60	45.399	ENSPNYG00000019325	-	65	45.399	Pundamilia_nyererei
ENSSMAG00000013828	-	60	47.879	ENSPNYG00000011024	-	59	47.879	Pundamilia_nyererei
ENSSMAG00000013828	-	60	45.087	ENSPNYG00000003834	-	85	45.087	Pundamilia_nyererei
ENSSMAG00000013828	-	60	45.729	ENSPNYG00000020737	-	88	45.729	Pundamilia_nyererei
ENSSMAG00000013828	-	60	45.690	ENSPNAG00000010850	-	85	45.690	Pygocentrus_nattereri
ENSSMAG00000013828	-	99	54.475	ENSPNAG00000025882	-	99	54.475	Pygocentrus_nattereri
ENSSMAG00000013828	-	61	44.245	ENSPNAG00000011660	-	56	44.245	Pygocentrus_nattereri
ENSSMAG00000013828	-	97	47.896	ENSSFOG00015006083	-	99	47.896	Scleropages_formosus
ENSSMAG00000013828	-	100	78.876	ENSSDUG00000015013	-	100	78.876	Seriola_dumerili
ENSSMAG00000013828	-	73	52.857	ENSSDUG00000023765	-	98	52.857	Seriola_dumerili
ENSSMAG00000013828	-	60	45.276	ENSSDUG00000023764	-	95	45.276	Seriola_dumerili
ENSSMAG00000013828	-	100	78.488	ENSSLDG00000021278	-	100	78.488	Seriola_lalandi_dorsalis
ENSSMAG00000013828	-	60	53.425	ENSSPAG00000008950	-	68	38.542	Stegastes_partitus
ENSSMAG00000013828	-	60	45.714	ENSSPAG00000007691	-	78	45.714	Stegastes_partitus
ENSSMAG00000013828	-	73	79.404	ENSSPAG00000007403	-	94	79.404	Stegastes_partitus
ENSSMAG00000013828	-	62	47.742	ENSTGUG00000015549	-	100	47.742	Taeniopygia_guttata
ENSSMAG00000013828	-	60	50.000	ENSTGUG00000018254	-	99	50.000	Taeniopygia_guttata
ENSSMAG00000013828	-	60	51.049	ENSTGUG00000018439	-	100	51.049	Taeniopygia_guttata
ENSSMAG00000013828	-	66	43.103	ENSTRUG00000021167	-	58	43.103	Takifugu_rubripes
ENSSMAG00000013828	-	88	51.220	ENSTRUG00000024009	-	100	51.220	Takifugu_rubripes
ENSSMAG00000013828	-	68	46.667	ENSTRUG00000023491	-	70	46.667	Takifugu_rubripes
ENSSMAG00000013828	-	60	72.757	ENSTNIG00000002344	-	100	72.757	Tetraodon_nigroviridis
ENSSMAG00000013828	-	60	45.545	ENSXCOG00000011372	-	69	45.545	Xiphophorus_couchianus
ENSSMAG00000013828	-	73	41.892	ENSXCOG00000013306	-	65	44.526	Xiphophorus_couchianus
ENSSMAG00000013828	-	60	45.763	ENSXCOG00000020769	-	84	45.763	Xiphophorus_couchianus
ENSSMAG00000013828	-	60	44.800	ENSXMAG00000024973	-	64	44.800	Xiphophorus_maculatus
ENSSMAG00000013828	-	65	41.919	ENSXMAG00000025174	-	51	41.919	Xiphophorus_maculatus