EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSSMAG00000013844 (Gene tree)
Gene ID: -
Gene Symbol: cnot1
Alias: cdc39-like|im:7141761|kiaa1007l|wu:fc58h04|zgc:152902
Full Name: CCR4-NOT transcription complex%2C subunit 1
Gene Type: protein_coding
Species: Scophthalmus_maximus
Status: putative
Strand: Minus strand
Length: 20333 bases
Position: chr10:21095477-21115809
Accession: ZDB-GENE-040915-1
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSMAP00000023075	Not1	PF04054.15	3.8e-153	1	1
ENSSMAP00000022968	Not1	PF04054.15	3.8e-153	1	1
ENSSMAP00000022851	Not1	PF04054.15	3.1e-67	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSMAT00000023340	-	6894	-	ENSSMAP00000023075	2297 (aa)	-	-
ENSSMAT00000023113	-	9796	-	ENSSMAP00000022851	2222 (aa)	-	-
ENSSMAT00000023231	-	9314	-	ENSSMAP00000022968	2407 (aa)	-	-

Gene Model

Click here to download ENSSMAG00000013844's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSMAG00000013844's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSMAG00000013844	cnot1	100	97.055	ENSG00000125107	CNOT1	100	100.000	Homo_sapiens
ENSSMAG00000013844	cnot1	100	97.106	ENSAPOG00000005042	cnot1	100	97.106	Acanthochromis_polyacanthus
ENSSMAG00000013844	cnot1	100	97.055	ENSAMEG00000017298	CNOT1	97	97.055	Ailuropoda_melanoleuca
ENSSMAG00000013844	cnot1	90	98.177	ENSACIG00000016003	cnot1	100	95.542	Amphilophus_citrinellus
ENSSMAG00000013844	cnot1	100	94.898	ENSAPEG00000022342	cnot1	100	94.362	Amphiprion_percula
ENSSMAG00000013844	cnot1	100	97.366	ENSATEG00000012892	cnot1	100	97.366	Anabas_testudineus
ENSSMAG00000013844	cnot1	100	96.078	ENSAPLG00000007162	CNOT1	97	97.059	Anas_platyrhynchos
ENSSMAG00000013844	cnot1	98	88.879	ENSACAG00000001602	CNOT1	95	95.732	Anolis_carolinensis
ENSSMAG00000013844	cnot1	100	88.272	ENSANAG00000038198	CNOT1	100	87.268	Aotus_nancymaae
ENSSMAG00000013844	cnot1	100	96.024	ENSACLG00000014234	cnot1	100	96.024	Astatotilapia_calliptera
ENSSMAG00000013844	cnot1	100	93.939	ENSAMXG00000013170	cnot1	100	93.651	Astyanax_mexicanus
ENSSMAG00000013844	cnot1	100	97.055	ENSBTAG00000020782	CNOT1	100	96.407	Bos_taurus
ENSSMAG00000013844	cnot1	76	44.202	WBGene00002845	let-711	92	54.008	Caenorhabditis_elegans
ENSSMAG00000013844	cnot1	100	97.055	ENSCJAG00000011318	CNOT1	97	97.055	Callithrix_jacchus
ENSSMAG00000013844	cnot1	100	96.100	ENSCAFG00000008426	CNOT1	97	96.100	Canis_familiaris
ENSSMAG00000013844	cnot1	100	94.825	ENSCAFG00020010156	CNOT1	100	93.241	Canis_lupus_dingo
ENSSMAG00000013844	cnot1	100	97.055	ENSCHIG00000010452	CNOT1	97	97.055	Capra_hircus
ENSSMAG00000013844	cnot1	100	97.055	ENSTSYG00000006888	CNOT1	97	97.055	Carlito_syrichta
ENSSMAG00000013844	cnot1	100	97.195	ENSCPOG00000013026	CNOT1	97	97.195	Cavia_porcellus
ENSSMAG00000013844	cnot1	100	97.055	ENSCCAG00000026333	CNOT1	97	97.055	Cebus_capucinus
ENSSMAG00000013844	cnot1	100	97.055	ENSCATG00000032625	CNOT1	97	97.055	Cercocebus_atys
ENSSMAG00000013844	cnot1	100	97.195	ENSCLAG00000006289	CNOT1	97	97.195	Chinchilla_lanigera
ENSSMAG00000013844	cnot1	100	97.055	ENSCSAG00000004731	CNOT1	97	97.055	Chlorocebus_sabaeus
ENSSMAG00000013844	cnot1	80	97.727	ENSCHOG00000009712	CNOT1	83	97.527	Choloepus_hoffmanni
ENSSMAG00000013844	cnot1	98	96.914	ENSCPBG00000026222	CNOT1	98	95.842	Chrysemys_picta_bellii
ENSSMAG00000013844	cnot1	100	58.258	ENSCING00000009149	-	100	57.992	Ciona_intestinalis
ENSSMAG00000013844	cnot1	89	77.019	ENSCSAVG00000002414	-	95	79.470	Ciona_savignyi
ENSSMAG00000013844	cnot1	100	96.111	ENSCANG00000040534	CNOT1	97	96.111	Colobus_angolensis_palliatus
ENSSMAG00000013844	cnot1	100	96.914	ENSCGRG00001016365	Cnot1	97	96.914	Cricetulus_griseus_chok1gshd
ENSSMAG00000013844	cnot1	100	96.914	ENSCGRG00000001714	Cnot1	97	96.914	Cricetulus_griseus_crigri
ENSSMAG00000013844	cnot1	97	99.158	ENSCVAG00000018930	cnot1	100	99.158	Cyprinodon_variegatus
ENSSMAG00000013844	cnot1	100	93.654	ENSDARG00000004174	cnot1	100	93.488	Danio_rerio
ENSSMAG00000013844	cnot1	100	94.258	ENSDNOG00000013250	CNOT1	97	94.258	Dasypus_novemcinctus
ENSSMAG00000013844	cnot1	99	45.419	FBgn0085436	Not1	99	47.485	Drosophila_melanogaster
ENSSMAG00000013844	cnot1	86	94.880	ENSETEG00000012806	CNOT1	84	94.880	Echinops_telfairi
ENSSMAG00000013844	cnot1	79	82.403	ENSEBUG00000011534	cnot1	95	76.042	Eptatretus_burgeri
ENSSMAG00000013844	cnot1	100	97.055	ENSEASG00005005819	CNOT1	100	96.407	Equus_asinus_asinus
ENSSMAG00000013844	cnot1	100	97.055	ENSECAG00000009889	CNOT1	97	97.055	Equus_caballus
ENSSMAG00000013844	cnot1	87	98.667	ENSEEUG00000006015	CNOT1	85	98.667	Erinaceus_europaeus
ENSSMAG00000013844	cnot1	100	96.866	ENSELUG00000014085	cnot1	100	94.166	Esox_lucius
ENSSMAG00000013844	cnot1	100	96.111	ENSFCAG00000025155	CNOT1	97	97.055	Felis_catus
ENSSMAG00000013844	cnot1	100	97.055	ENSFALG00000007285	CNOT1	97	97.055	Ficedula_albicollis
ENSSMAG00000013844	cnot1	100	97.195	ENSFDAG00000013399	CNOT1	97	97.195	Fukomys_damarensis
ENSSMAG00000013844	cnot1	100	94.325	ENSFHEG00000020574	cnot1	100	94.325	Fundulus_heteroclitus
ENSSMAG00000013844	cnot1	98	94.597	ENSGMOG00000012864	cnot1	99	99.385	Gadus_morhua
ENSSMAG00000013844	cnot1	100	97.055	ENSGALG00000002301	CNOT1	97	97.055	Gallus_gallus
ENSSMAG00000013844	cnot1	100	99.018	ENSGAFG00000015005	cnot1	97	99.018	Gambusia_affinis
ENSSMAG00000013844	cnot1	98	96.662	ENSGACG00000002606	cnot1	100	99.515	Gasterosteus_aculeatus
ENSSMAG00000013844	cnot1	100	96.914	ENSGAGG00000022646	CNOT1	97	96.914	Gopherus_agassizii
ENSSMAG00000013844	cnot1	100	97.055	ENSGGOG00000009547	CNOT1	97	97.055	Gorilla_gorilla
ENSSMAG00000013844	cnot1	100	96.319	ENSHBUG00000001729	cnot1	100	96.319	Haplochromis_burtoni
ENSSMAG00000013844	cnot1	100	97.195	ENSHGLG00000014322	CNOT1	97	97.195	Heterocephalus_glaber_female
ENSSMAG00000013844	cnot1	100	95.319	ENSHCOG00000006501	cnot1	100	95.029	Hippocampus_comes
ENSSMAG00000013844	cnot1	100	91.101	ENSIPUG00000011915	cnot1	100	90.894	Ictalurus_punctatus
ENSSMAG00000013844	cnot1	100	97.195	ENSSTOG00000005490	CNOT1	97	97.195	Ictidomys_tridecemlineatus
ENSSMAG00000013844	cnot1	100	96.494	ENSJJAG00000000633	Cnot1	97	96.494	Jaculus_jaculus
ENSSMAG00000013844	cnot1	100	95.686	ENSKMAG00000006149	cnot1	100	95.686	Kryptolebias_marmoratus
ENSSMAG00000013844	cnot1	95	98.410	ENSLBEG00000004740	cnot1	100	98.410	Labrus_bergylta
ENSSMAG00000013844	cnot1	100	97.055	ENSLACG00000010869	CNOT1	99	97.055	Latimeria_chalumnae
ENSSMAG00000013844	cnot1	100	99.439	ENSLOCG00000006324	cnot1	97	99.439	Lepisosteus_oculatus
ENSSMAG00000013844	cnot1	100	96.914	ENSLAFG00000000098	CNOT1	97	96.914	Loxodonta_africana
ENSSMAG00000013844	cnot1	100	97.055	ENSMFAG00000035888	CNOT1	97	97.055	Macaca_fascicularis
ENSSMAG00000013844	cnot1	100	97.055	ENSMMUG00000014625	CNOT1	97	97.055	Macaca_mulatta
ENSSMAG00000013844	cnot1	100	96.111	ENSMNEG00000031820	CNOT1	97	97.055	Macaca_nemestrina
ENSSMAG00000013844	cnot1	100	92.500	ENSMLEG00000040933	CNOT1	97	92.500	Mandrillus_leucophaeus
ENSSMAG00000013844	cnot1	100	93.156	ENSMAMG00000016524	cnot1	100	92.869	Mastacembelus_armatus
ENSSMAG00000013844	cnot1	100	94.209	ENSMZEG00005016210	cnot1	100	94.209	Maylandia_zebra
ENSSMAG00000013844	cnot1	100	97.055	ENSMGAG00000001908	CNOT1	97	97.055	Meleagris_gallopavo
ENSSMAG00000013844	cnot1	100	97.055	ENSMICG00000007071	CNOT1	97	97.055	Microcebus_murinus
ENSSMAG00000013844	cnot1	100	96.914	ENSMOCG00000017969	Cnot1	97	96.914	Microtus_ochrogaster
ENSSMAG00000013844	cnot1	100	96.112	ENSMMOG00000019134	cnot1	100	96.112	Mola_mola
ENSSMAG00000013844	cnot1	100	96.078	ENSMODG00000014199	CNOT1	97	97.059	Monodelphis_domestica
ENSSMAG00000013844	cnot1	100	94.027	ENSMALG00000008645	cnot1	100	93.657	Monopterus_albus
ENSSMAG00000013844	cnot1	98	95.238	MGP_CAROLIEiJ_G0031430	Cnot1	92	95.652	Mus_caroli
ENSSMAG00000013844	cnot1	100	96.914	ENSMUSG00000036550	Cnot1	97	96.914	Mus_musculus
ENSSMAG00000013844	cnot1	100	96.914	MGP_PahariEiJ_G0023028	Cnot1	97	96.914	Mus_pahari
ENSSMAG00000013844	cnot1	100	96.914	MGP_SPRETEiJ_G0032549	Cnot1	97	96.914	Mus_spretus
ENSSMAG00000013844	cnot1	100	97.055	ENSMPUG00000004830	CNOT1	97	97.055	Mustela_putorius_furo
ENSSMAG00000013844	cnot1	100	96.914	ENSMLUG00000003728	CNOT1	97	96.914	Myotis_lucifugus
ENSSMAG00000013844	cnot1	100	97.055	ENSNGAG00000018628	Cnot1	97	97.055	Nannospalax_galili
ENSSMAG00000013844	cnot1	97	95.000	ENSNBRG00000019358	cnot1	100	95.000	Neolamprologus_brichardi
ENSSMAG00000013844	cnot1	100	97.055	ENSNLEG00000003566	CNOT1	97	97.055	Nomascus_leucogenys
ENSSMAG00000013844	cnot1	86	92.841	ENSMEUG00000006145	CNOT1	87	92.841	Notamacropus_eugenii
ENSSMAG00000013844	cnot1	86	97.778	ENSOPRG00000005604	CNOT1	84	97.778	Ochotona_princeps
ENSSMAG00000013844	cnot1	100	97.195	ENSODEG00000016337	CNOT1	97	97.195	Octodon_degus
ENSSMAG00000013844	cnot1	100	95.724	ENSONIG00000007358	cnot1	100	95.724	Oreochromis_niloticus
ENSSMAG00000013844	cnot1	98	89.652	ENSOANG00000012109	CNOT1	97	96.774	Ornithorhynchus_anatinus
ENSSMAG00000013844	cnot1	100	97.055	ENSOCUG00000006911	CNOT1	97	97.055	Oryctolagus_cuniculus
ENSSMAG00000013844	cnot1	100	95.600	ENSORLG00000013734	cnot1	100	95.600	Oryzias_latipes
ENSSMAG00000013844	cnot1	100	93.566	ENSORLG00020017012	cnot1	100	93.566	Oryzias_latipes_hni
ENSSMAG00000013844	cnot1	100	93.441	ENSORLG00015007091	cnot1	100	93.441	Oryzias_latipes_hsok
ENSSMAG00000013844	cnot1	100	93.275	ENSOMEG00000015124	cnot1	100	93.192	Oryzias_melastigma
ENSSMAG00000013844	cnot1	100	97.055	ENSOGAG00000000543	CNOT1	97	97.055	Otolemur_garnettii
ENSSMAG00000013844	cnot1	100	97.055	ENSOARG00000001567	CNOT1	97	97.055	Ovis_aries
ENSSMAG00000013844	cnot1	100	97.055	ENSPPAG00000022013	CNOT1	97	97.055	Pan_paniscus
ENSSMAG00000013844	cnot1	100	97.055	ENSPPRG00000004867	CNOT1	97	97.055	Panthera_pardus
ENSSMAG00000013844	cnot1	100	97.055	ENSPTIG00000012589	CNOT1	97	97.055	Panthera_tigris_altaica
ENSSMAG00000013844	cnot1	100	96.111	ENSPTRG00000008183	CNOT1	97	96.111	Pan_troglodytes
ENSSMAG00000013844	cnot1	100	87.087	ENSPANG00000020901	CNOT1	100	86.603	Papio_anubis
ENSSMAG00000013844	cnot1	99	88.352	ENSPKIG00000002914	CNOT1	99	88.144	Paramormyrops_kingsleyae
ENSSMAG00000013844	cnot1	100	98.457	ENSPKIG00000023538	CNOT1	97	98.457	Paramormyrops_kingsleyae
ENSSMAG00000013844	cnot1	100	97.055	ENSPSIG00000005499	CNOT1	97	97.055	Pelodiscus_sinensis
ENSSMAG00000013844	cnot1	100	78.897	ENSPMAG00000009381	cnot1	100	78.610	Petromyzon_marinus
ENSSMAG00000013844	cnot1	100	97.195	ENSPCIG00000007343	CNOT1	100	96.607	Phascolarctos_cinereus
ENSSMAG00000013844	cnot1	99	94.507	ENSPFOG00000003497	cnot1	100	94.423	Poecilia_formosa
ENSSMAG00000013844	cnot1	95	98.204	ENSPLAG00000014018	cnot1	100	98.204	Poecilia_latipinna
ENSSMAG00000013844	cnot1	95	98.204	ENSPMEG00000005868	cnot1	100	98.204	Poecilia_mexicana
ENSSMAG00000013844	cnot1	95	98.204	ENSPREG00000018793	cnot1	100	98.204	Poecilia_reticulata
ENSSMAG00000013844	cnot1	100	97.055	ENSPPYG00000007410	CNOT1	97	97.055	Pongo_abelii
ENSSMAG00000013844	cnot1	88	93.662	ENSPCAG00000003241	CNOT1	86	93.662	Procavia_capensis
ENSSMAG00000013844	cnot1	100	96.111	ENSPCOG00000027139	CNOT1	97	96.111	Propithecus_coquereli
ENSSMAG00000013844	cnot1	100	89.762	ENSPVAG00000004243	CNOT1	100	87.541	Pteropus_vampyrus
ENSSMAG00000013844	cnot1	100	96.275	ENSPNYG00000012919	cnot1	100	96.275	Pundamilia_nyererei
ENSSMAG00000013844	cnot1	100	91.864	ENSPNAG00000000246	cnot1	100	91.615	Pygocentrus_nattereri
ENSSMAG00000013844	cnot1	100	96.774	ENSRNOG00000012271	Cnot1	97	96.774	Rattus_norvegicus
ENSSMAG00000013844	cnot1	100	96.111	ENSRBIG00000044598	CNOT1	97	96.111	Rhinopithecus_bieti
ENSSMAG00000013844	cnot1	100	97.055	ENSRROG00000000906	CNOT1	97	97.055	Rhinopithecus_roxellana
ENSSMAG00000013844	cnot1	53	38.767	YCR093W	CDC39	61	34.074	Saccharomyces_cerevisiae
ENSSMAG00000013844	cnot1	100	92.287	ENSSBOG00000029155	CNOT1	97	92.287	Saimiri_boliviensis_boliviensis
ENSSMAG00000013844	cnot1	100	97.195	ENSSHAG00000012187	CNOT1	97	97.195	Sarcophilus_harrisii
ENSSMAG00000013844	cnot1	100	92.847	ENSSFOG00015017614	cnot1	100	91.301	Scleropages_formosus
ENSSMAG00000013844	cnot1	100	97.841	ENSSDUG00000021491	cnot1	100	97.841	Seriola_dumerili
ENSSMAG00000013844	cnot1	100	98.423	ENSSLDG00000014816	cnot1	100	98.423	Seriola_lalandi_dorsalis
ENSSMAG00000013844	cnot1	86	97.800	ENSSARG00000000762	CNOT1	88	97.800	Sorex_araneus
ENSSMAG00000013844	cnot1	100	94.567	ENSSPAG00000018802	cnot1	100	94.527	Stegastes_partitus
ENSSMAG00000013844	cnot1	100	96.914	ENSSSCG00000002799	CNOT1	100	96.407	Sus_scrofa
ENSSMAG00000013844	cnot1	100	97.055	ENSTGUG00000005919	CNOT1	97	97.055	Taeniopygia_guttata
ENSSMAG00000013844	cnot1	100	99.018	ENSTNIG00000018706	cnot1	97	99.018	Tetraodon_nigroviridis
ENSSMAG00000013844	cnot1	80	97.887	ENSTBEG00000000720	CNOT1	80	95.862	Tupaia_belangeri
ENSSMAG00000013844	cnot1	95	97.055	ENSTTRG00000008460	CNOT1	92	97.055	Tursiops_truncatus
ENSSMAG00000013844	cnot1	100	97.055	ENSUAMG00000009251	CNOT1	97	97.055	Ursus_americanus
ENSSMAG00000013844	cnot1	100	97.055	ENSUMAG00000021291	CNOT1	97	97.055	Ursus_maritimus
ENSSMAG00000013844	cnot1	97	93.689	ENSVPAG00000008846	CNOT1	97	92.524	Vicugna_pacos
ENSSMAG00000013844	cnot1	100	94.825	ENSVVUG00000024037	CNOT1	100	93.241	Vulpes_vulpes
ENSSMAG00000013844	cnot1	100	89.356	ENSXETG00000015900	cnot1	97	89.356	Xenopus_tropicalis
ENSSMAG00000013844	cnot1	100	92.368	ENSXCOG00000013552	cnot1	100	92.324	Xiphophorus_couchianus
ENSSMAG00000013844	cnot1	100	92.410	ENSXMAG00000006031	cnot1	100	92.365	Xiphophorus_maculatus