EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSSMAG00000013885 (Gene tree)
Gene ID: -
Gene Symbol: ssb
Alias: wu:fb17f11
Full Name: Sjogren syndrome antigen B (autoantigen La)
Gene Type: protein_coding
Species: Scophthalmus_maximus
Status: putative
Strand: Plus strand
Length: 2692 bases
Position: chr14:12056148-12058839
Accession: ZDB-GENE-030131-223
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSMAP00000022822	RRM_1	PF00076.22	5.7e-12	1	1
ENSSMAP00000022800	RRM_1	PF00076.22	5.8e-12	1	1
ENSSMAP00000022800	RRM_3	PF08777.11	8.7e-29	1	1
ENSSMAP00000022822	RRM_3	PF08777.11	1e-28	1	1
ENSSMAP00000022822	La	PF05383.17	9.9e-21	1	1
ENSSMAP00000022800	La	PF05383.17	1e-20	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSMAT00000023084	-	1122	-	ENSSMAP00000022822	373 (aa)	-	-
ENSSMAT00000023062	-	1116	-	ENSSMAP00000022800	371 (aa)	-	-

Gene Model

Click here to download ENSSMAG00000013885's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSMAG00000013885's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSMAG00000013885	ssb	99	56.952	ENSG00000138385	SSB	98	62.712	Homo_sapiens
ENSSMAG00000013885	ssb	99	90.296	ENSAPOG00000003448	ssb	96	89.488	Acanthochromis_polyacanthus
ENSSMAG00000013885	ssb	99	55.844	ENSAMEG00000010507	SSB	98	51.208	Ailuropoda_melanoleuca
ENSSMAG00000013885	ssb	99	83.019	ENSACIG00000001738	ssb	96	83.019	Amphilophus_citrinellus
ENSSMAG00000013885	ssb	99	90.836	ENSAOCG00000020398	ssb	96	90.027	Amphiprion_ocellaris
ENSSMAG00000013885	ssb	99	90.836	ENSAPEG00000020395	ssb	96	90.027	Amphiprion_percula
ENSSMAG00000013885	ssb	99	87.097	ENSATEG00000016884	ssb	100	83.709	Anabas_testudineus
ENSSMAG00000013885	ssb	99	54.756	ENSAPLG00000006109	SSB	97	50.728	Anas_platyrhynchos
ENSSMAG00000013885	ssb	98	56.911	ENSACAG00000017008	SSB	97	53.807	Anolis_carolinensis
ENSSMAG00000013885	ssb	100	50.378	ENSANAG00000027195	-	98	48.990	Aotus_nancymaae
ENSSMAG00000013885	ssb	99	79.189	ENSACLG00000010798	ssb	100	77.099	Astatotilapia_calliptera
ENSSMAG00000013885	ssb	98	63.661	ENSAMXG00000012606	ssb	100	58.333	Astyanax_mexicanus
ENSSMAG00000013885	ssb	99	57.487	ENSBTAG00000008716	SSB	98	54.271	Bos_taurus
ENSSMAG00000013885	ssb	80	34.098	WBGene00016653	C44E4.4	76	34.426	Caenorhabditis_elegans
ENSSMAG00000013885	ssb	99	57.487	ENSCJAG00000045073	SSB	98	53.885	Callithrix_jacchus
ENSSMAG00000013885	ssb	99	57.219	ENSCAFG00000012418	SSB	98	53.500	Canis_familiaris
ENSSMAG00000013885	ssb	99	57.219	ENSCAFG00020002900	SSB	98	53.500	Canis_lupus_dingo
ENSSMAG00000013885	ssb	99	51.554	ENSCHIG00000022196	-	98	51.157	Capra_hircus
ENSSMAG00000013885	ssb	99	57.487	ENSCHIG00000022624	-	98	53.885	Capra_hircus
ENSSMAG00000013885	ssb	99	57.219	ENSTSYG00000000097	SSB	98	55.759	Carlito_syrichta
ENSSMAG00000013885	ssb	99	57.447	ENSCPOG00000003338	SSB	98	55.208	Cavia_porcellus
ENSSMAG00000013885	ssb	99	57.219	ENSCCAG00000035147	SSB	98	53.634	Cebus_capucinus
ENSSMAG00000013885	ssb	69	54.440	ENSCATG00000036701	SSB	83	50.000	Cercocebus_atys
ENSSMAG00000013885	ssb	99	42.895	ENSCATG00000042909	-	98	42.559	Cercocebus_atys
ENSSMAG00000013885	ssb	99	57.487	ENSCLAG00000015617	-	98	53.885	Chinchilla_lanigera
ENSSMAG00000013885	ssb	99	57.219	ENSCSAG00000015200	SSB	87	53.634	Chlorocebus_sabaeus
ENSSMAG00000013885	ssb	99	51.733	ENSCSAG00000018390	-	96	48.556	Chlorocebus_sabaeus
ENSSMAG00000013885	ssb	99	57.754	ENSCHOG00000007763	SSB	98	54.386	Choloepus_hoffmanni
ENSSMAG00000013885	ssb	98	61.247	ENSCPBG00000006519	SSB	98	55.831	Chrysemys_picta_bellii
ENSSMAG00000013885	ssb	99	57.219	ENSCANG00000027695	SSB	98	53.634	Colobus_angolensis_palliatus
ENSSMAG00000013885	ssb	100	50.129	ENSCANG00000033240	-	98	49.610	Colobus_angolensis_palliatus
ENSSMAG00000013885	ssb	98	45.504	ENSCANG00000028838	-	91	42.820	Colobus_angolensis_palliatus
ENSSMAG00000013885	ssb	98	53.639	ENSCGRG00001024831	Ssb	98	49.626	Cricetulus_griseus_chok1gshd
ENSSMAG00000013885	ssb	98	53.639	ENSCGRG00000005387	Ssb	98	49.626	Cricetulus_griseus_crigri
ENSSMAG00000013885	ssb	99	84.324	ENSCSEG00000011599	ssb	100	78.446	Cynoglossus_semilaevis
ENSSMAG00000013885	ssb	99	86.559	ENSCVAG00000021558	ssb	93	86.559	Cyprinodon_variegatus
ENSSMAG00000013885	ssb	99	64.420	ENSDARG00000029252	ssb	100	59.102	Danio_rerio
ENSSMAG00000013885	ssb	99	57.754	ENSDNOG00000013450	SSB	98	54.386	Dasypus_novemcinctus
ENSSMAG00000013885	ssb	100	53.671	ENSDORG00000005543	Ssb	98	52.685	Dipodomys_ordii
ENSSMAG00000013885	ssb	91	35.311	FBgn0011638	La	78	37.621	Drosophila_melanogaster
ENSSMAG00000013885	ssb	54	62.871	ENSETEG00000004614	-	52	62.871	Echinops_telfairi
ENSSMAG00000013885	ssb	99	46.392	ENSEBUG00000001237	ssb	97	44.588	Eptatretus_burgeri
ENSSMAG00000013885	ssb	99	57.754	ENSEASG00005022835	SSB	98	53.885	Equus_asinus_asinus
ENSSMAG00000013885	ssb	99	57.754	ENSECAG00000018495	SSB	98	53.885	Equus_caballus
ENSSMAG00000013885	ssb	82	47.727	ENSEEUG00000008077	SSB	77	50.174	Erinaceus_europaeus
ENSSMAG00000013885	ssb	99	72.043	ENSELUG00000020929	ssb	100	67.082	Esox_lucius
ENSSMAG00000013885	ssb	99	58.289	ENSFCAG00000011601	SSB	98	54.750	Felis_catus
ENSSMAG00000013885	ssb	99	57.373	ENSFALG00000000930	SSB	97	54.198	Ficedula_albicollis
ENSSMAG00000013885	ssb	99	57.754	ENSFDAG00000000598	SSB	98	54.386	Fukomys_damarensis
ENSSMAG00000013885	ssb	80	75.578	ENSFHEG00000003268	ssb	94	77.524	Fundulus_heteroclitus
ENSSMAG00000013885	ssb	98	74.124	ENSGMOG00000002664	ssb	100	71.106	Gadus_morhua
ENSSMAG00000013885	ssb	99	57.641	ENSGALG00000009677	SSB	97	53.571	Gallus_gallus
ENSSMAG00000013885	ssb	98	82.609	ENSGAFG00000002749	ssb	100	78.412	Gambusia_affinis
ENSSMAG00000013885	ssb	99	82.713	ENSGACG00000005107	ssb	100	77.723	Gasterosteus_aculeatus
ENSSMAG00000013885	ssb	98	60.705	ENSGAGG00000007807	SSB	98	55.583	Gopherus_agassizii
ENSSMAG00000013885	ssb	99	48.128	ENSGGOG00000024891	-	97	44.444	Gorilla_gorilla
ENSSMAG00000013885	ssb	50	55.851	ENSGGOG00000023471	-	90	49.091	Gorilla_gorilla
ENSSMAG00000013885	ssb	99	79.189	ENSHBUG00000006584	ssb	100	76.845	Haplochromis_burtoni
ENSSMAG00000013885	ssb	99	57.407	ENSHGLG00000017580	-	98	53.448	Heterocephalus_glaber_female
ENSSMAG00000013885	ssb	99	51.979	ENSHGLG00000005832	-	98	49.610	Heterocephalus_glaber_female
ENSSMAG00000013885	ssb	98	52.151	ENSHGLG00000004478	-	98	49.497	Heterocephalus_glaber_female
ENSSMAG00000013885	ssb	99	52.139	ENSHGLG00100008767	-	98	48.737	Heterocephalus_glaber_male
ENSSMAG00000013885	ssb	99	57.407	ENSHGLG00100003084	-	98	53.448	Heterocephalus_glaber_male
ENSSMAG00000013885	ssb	98	75.890	ENSHCOG00000019011	ssb	99	73.791	Hippocampus_comes
ENSSMAG00000013885	ssb	99	64.343	ENSIPUG00000003681	SSB	100	59.214	Ictalurus_punctatus
ENSSMAG00000013885	ssb	99	56.684	ENSSTOG00000008416	SSB	98	53.266	Ictidomys_tridecemlineatus
ENSSMAG00000013885	ssb	99	50.758	ENSJJAG00000023158	-	99	48.910	Jaculus_jaculus
ENSSMAG00000013885	ssb	90	45.723	ENSJJAG00000016250	-	94	44.957	Jaculus_jaculus
ENSSMAG00000013885	ssb	99	84.946	ENSKMAG00000017317	ssb	100	82.161	Kryptolebias_marmoratus
ENSSMAG00000013885	ssb	99	85.445	ENSLBEG00000017345	ssb	100	82.323	Labrus_bergylta
ENSSMAG00000013885	ssb	97	57.300	ENSLACG00000014056	SSB	98	53.000	Latimeria_chalumnae
ENSSMAG00000013885	ssb	98	68.306	ENSLOCG00000007933	ssb	98	61.250	Lepisosteus_oculatus
ENSSMAG00000013885	ssb	99	54.522	ENSLAFG00000000867	-	98	51.202	Loxodonta_africana
ENSSMAG00000013885	ssb	99	49.598	ENSLAFG00000028909	-	97	47.558	Loxodonta_africana
ENSSMAG00000013885	ssb	80	42.282	ENSLAFG00000026721	-	98	42.282	Loxodonta_africana
ENSSMAG00000013885	ssb	94	49.292	ENSMFAG00000041478	-	90	52.597	Macaca_fascicularis
ENSSMAG00000013885	ssb	99	57.219	ENSMFAG00000039066	SSB	98	53.634	Macaca_fascicularis
ENSSMAG00000013885	ssb	99	40.933	ENSMMUG00000039889	-	98	42.010	Macaca_mulatta
ENSSMAG00000013885	ssb	100	50.000	ENSMMUG00000011724	-	96	49.735	Macaca_mulatta
ENSSMAG00000013885	ssb	99	57.219	ENSMMUG00000023051	SSB	98	53.634	Macaca_mulatta
ENSSMAG00000013885	ssb	98	48.649	ENSMNEG00000028321	SSB	82	63.063	Macaca_nemestrina
ENSSMAG00000013885	ssb	94	49.292	ENSMNEG00000034698	-	90	52.597	Macaca_nemestrina
ENSSMAG00000013885	ssb	100	41.579	ENSMLEG00000042644	-	98	41.223	Mandrillus_leucophaeus
ENSSMAG00000013885	ssb	99	57.219	ENSMLEG00000035717	SSB	98	53.634	Mandrillus_leucophaeus
ENSSMAG00000013885	ssb	99	85.753	ENSMAMG00000004800	ssb	100	81.658	Mastacembelus_armatus
ENSSMAG00000013885	ssb	99	79.189	ENSMZEG00005005749	ssb	100	77.099	Maylandia_zebra
ENSSMAG00000013885	ssb	98	58.266	ENSMGAG00000010328	SSB	95	62.944	Meleagris_gallopavo
ENSSMAG00000013885	ssb	99	57.487	ENSMICG00000028252	-	98	53.885	Microcebus_murinus
ENSSMAG00000013885	ssb	99	52.941	ENSMICG00000033304	-	97	51.648	Microcebus_murinus
ENSSMAG00000013885	ssb	100	50.259	ENSMODG00000019271	-	98	49.738	Monodelphis_domestica
ENSSMAG00000013885	ssb	99	55.643	ENSMODG00000008227	-	98	52.273	Monodelphis_domestica
ENSSMAG00000013885	ssb	100	47.287	ENSMODG00000007027	-	98	47.258	Monodelphis_domestica
ENSSMAG00000013885	ssb	98	79.837	ENSMALG00000008045	ssb	91	82.228	Monopterus_albus
ENSSMAG00000013885	ssb	97	53.034	MGP_CAROLIEiJ_G0023629	-	96	60.784	Mus_caroli
ENSSMAG00000013885	ssb	97	53.034	ENSMUSG00000068882	Ssb	96	60.784	Mus_musculus
ENSSMAG00000013885	ssb	97	52.770	MGP_PahariEiJ_G0025081	-	96	60.131	Mus_pahari
ENSSMAG00000013885	ssb	97	53.034	MGP_SPRETEiJ_G0024551	Ssb	96	60.784	Mus_spretus
ENSSMAG00000013885	ssb	99	58.021	ENSMPUG00000000785	SSB	98	53.885	Mustela_putorius_furo
ENSSMAG00000013885	ssb	99	55.959	ENSMLUG00000016316	SSB	99	52.657	Myotis_lucifugus
ENSSMAG00000013885	ssb	99	79.189	ENSNBRG00000012661	ssb	100	76.396	Neolamprologus_brichardi
ENSSMAG00000013885	ssb	99	56.952	ENSNLEG00000004958	SSB	98	53.383	Nomascus_leucogenys
ENSSMAG00000013885	ssb	89	45.104	ENSNLEG00000028754	-	76	47.078	Nomascus_leucogenys
ENSSMAG00000013885	ssb	67	62.000	ENSMEUG00000001650	-	100	62.000	Notamacropus_eugenii
ENSSMAG00000013885	ssb	92	56.560	ENSODEG00000004202	-	99	54.545	Octodon_degus
ENSSMAG00000013885	ssb	100	81.551	ENSONIG00000008776	ssb	100	77.665	Oreochromis_niloticus
ENSSMAG00000013885	ssb	97	57.735	ENSOANG00000008543	SSB	96	54.220	Ornithorhynchus_anatinus
ENSSMAG00000013885	ssb	99	56.684	ENSOCUG00000010396	SSB	98	53.383	Oryctolagus_cuniculus
ENSSMAG00000013885	ssb	99	80.645	ENSORLG00000017208	ssb	100	76.500	Oryzias_latipes
ENSSMAG00000013885	ssb	98	79.620	ENSORLG00020022574	ssb	100	76.559	Oryzias_latipes_hni
ENSSMAG00000013885	ssb	99	80.645	ENSORLG00015016592	ssb	100	77.000	Oryzias_latipes_hsok
ENSSMAG00000013885	ssb	98	82.834	ENSOMEG00000003193	ssb	100	78.697	Oryzias_melastigma
ENSSMAG00000013885	ssb	99	54.639	ENSOGAG00000029768	SSB	98	50.481	Otolemur_garnettii
ENSSMAG00000013885	ssb	99	57.487	ENSOARG00000002906	SSB	98	53.885	Ovis_aries
ENSSMAG00000013885	ssb	88	47.576	ENSPPAG00000006189	-	89	47.619	Pan_paniscus
ENSSMAG00000013885	ssb	99	56.952	ENSPPAG00000042673	SSB	98	52.985	Pan_paniscus
ENSSMAG00000013885	ssb	99	47.861	ENSPPAG00000032427	-	96	55.645	Pan_paniscus
ENSSMAG00000013885	ssb	99	58.289	ENSPPRG00000006599	SSB	98	54.750	Panthera_pardus
ENSSMAG00000013885	ssb	99	58.289	ENSPTIG00000011021	SSB	96	54.750	Panthera_tigris_altaica
ENSSMAG00000013885	ssb	100	45.478	ENSPTRG00000042880	-	97	44.474	Pan_troglodytes
ENSSMAG00000013885	ssb	99	56.952	ENSPTRG00000012620	SSB	98	52.985	Pan_troglodytes
ENSSMAG00000013885	ssb	99	57.219	ENSPANG00000007440	SSB	98	53.634	Papio_anubis
ENSSMAG00000013885	ssb	99	39.200	ENSPANG00000031877	-	91	40.166	Papio_anubis
ENSSMAG00000013885	ssb	99	41.067	ENSPANG00000034126	-	98	41.953	Papio_anubis
ENSSMAG00000013885	ssb	99	71.968	ENSPKIG00000019325	ssb	98	70.053	Paramormyrops_kingsleyae
ENSSMAG00000013885	ssb	98	59.350	ENSPSIG00000002265	SSB	92	54.342	Pelodiscus_sinensis
ENSSMAG00000013885	ssb	94	75.429	ENSPMGG00000020075	ssb	91	75.429	Periophthalmus_magnuspinnatus
ENSSMAG00000013885	ssb	95	45.706	ENSPMAG00000002982	ssb	85	46.467	Petromyzon_marinus
ENSSMAG00000013885	ssb	99	58.289	ENSPCIG00000028591	-	98	55.000	Phascolarctos_cinereus
ENSSMAG00000013885	ssb	99	83.871	ENSPFOG00000009650	ssb	100	79.500	Poecilia_formosa
ENSSMAG00000013885	ssb	98	83.607	ENSPLAG00000020498	ssb	100	79.500	Poecilia_latipinna
ENSSMAG00000013885	ssb	99	83.602	ENSPMEG00000001051	ssb	100	79.250	Poecilia_mexicana
ENSSMAG00000013885	ssb	99	83.333	ENSPREG00000003708	ssb	97	82.796	Poecilia_reticulata
ENSSMAG00000013885	ssb	99	56.952	ENSPPYG00000012919	SSB	98	53.383	Pongo_abelii
ENSSMAG00000013885	ssb	94	55.966	ENSPCAG00000010276	SSB	99	53.743	Procavia_capensis
ENSSMAG00000013885	ssb	99	55.348	ENSPCOG00000015741	-	92	60.345	Propithecus_coquereli
ENSSMAG00000013885	ssb	99	51.337	ENSPCOG00000023189	-	98	47.870	Propithecus_coquereli
ENSSMAG00000013885	ssb	94	58.523	ENSPVAG00000006615	SSB	98	58.239	Pteropus_vampyrus
ENSSMAG00000013885	ssb	99	79.189	ENSPNYG00000006444	ssb	100	77.099	Pundamilia_nyererei
ENSSMAG00000013885	ssb	100	59.113	ENSPNAG00000011708	ssb	100	59.113	Pygocentrus_nattereri
ENSSMAG00000013885	ssb	99	52.547	ENSRNOG00000011606	AABR07061825.1	98	49.242	Rattus_norvegicus
ENSSMAG00000013885	ssb	99	51.804	ENSRNOG00000007998	Ssb	98	48.900	Rattus_norvegicus
ENSSMAG00000013885	ssb	100	49.616	ENSRBIG00000041972	SSB	98	50.646	Rhinopithecus_bieti
ENSSMAG00000013885	ssb	85	53.145	ENSRBIG00000041608	-	94	49.560	Rhinopithecus_bieti
ENSSMAG00000013885	ssb	98	41.144	ENSRBIG00000029918	-	98	38.847	Rhinopithecus_bieti
ENSSMAG00000013885	ssb	93	48.711	ENSRBIG00000041232	-	98	47.383	Rhinopithecus_bieti
ENSSMAG00000013885	ssb	99	57.219	ENSRROG00000040346	SSB	98	53.634	Rhinopithecus_roxellana
ENSSMAG00000013885	ssb	98	48.907	ENSRROG00000031684	-	99	48.421	Rhinopithecus_roxellana
ENSSMAG00000013885	ssb	98	46.322	ENSRROG00000007149	-	98	44.110	Rhinopithecus_roxellana
ENSSMAG00000013885	ssb	85	55.975	ENSRROG00000034102	-	96	48.477	Rhinopithecus_roxellana
ENSSMAG00000013885	ssb	99	57.219	ENSSBOG00000027204	SSB	98	53.634	Saimiri_boliviensis_boliviensis
ENSSMAG00000013885	ssb	99	58.556	ENSSHAG00000018062	SSB	98	54.750	Sarcophilus_harrisii
ENSSMAG00000013885	ssb	99	70.620	ENSSFOG00015000550	ssb	99	63.772	Scleropages_formosus
ENSSMAG00000013885	ssb	99	90.080	ENSSDUG00000020117	ssb	100	85.930	Seriola_dumerili
ENSSMAG00000013885	ssb	100	89.710	ENSSLDG00000002525	ssb	100	89.974	Seriola_lalandi_dorsalis
ENSSMAG00000013885	ssb	94	53.125	ENSSARG00000007747	SSB	99	50.263	Sorex_araneus
ENSSMAG00000013885	ssb	99	59.840	ENSSPUG00000012112	SSB	98	55.750	Sphenodon_punctatus
ENSSMAG00000013885	ssb	99	88.949	ENSSPAG00000005696	ssb	96	88.410	Stegastes_partitus
ENSSMAG00000013885	ssb	98	52.703	ENSSSCG00000015938	SSB	96	50.130	Sus_scrofa
ENSSMAG00000013885	ssb	99	57.181	ENSTGUG00000007942	SSB	97	53.671	Taeniopygia_guttata
ENSSMAG00000013885	ssb	99	81.989	ENSTRUG00000017839	ssb	100	78.535	Takifugu_rubripes
ENSSMAG00000013885	ssb	98	79.891	ENSTNIG00000000915	ssb	100	78.804	Tetraodon_nigroviridis
ENSSMAG00000013885	ssb	81	63.478	ENSTBEG00000009056	SSB	80	63.063	Tupaia_belangeri
ENSSMAG00000013885	ssb	99	58.289	ENSTTRG00000002152	SSB	98	55.138	Tursiops_truncatus
ENSSMAG00000013885	ssb	99	57.487	ENSUAMG00000027833	SSB	96	57.297	Ursus_americanus
ENSSMAG00000013885	ssb	99	57.487	ENSUMAG00000013907	SSB	98	53.500	Ursus_maritimus
ENSSMAG00000013885	ssb	99	58.021	ENSVPAG00000007183	SSB	98	53.483	Vicugna_pacos
ENSSMAG00000013885	ssb	99	57.219	ENSVVUG00000016573	SSB	76	53.500	Vulpes_vulpes
ENSSMAG00000013885	ssb	99	57.333	ENSXETG00000025402	ssb	99	51.306	Xenopus_tropicalis
ENSSMAG00000013885	ssb	99	77.957	ENSXCOG00000019109	ssb	97	77.151	Xiphophorus_couchianus
ENSSMAG00000013885	ssb	99	81.989	ENSXMAG00000004888	ssb	100	77.419	Xiphophorus_maculatus